BAC Information

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BAC

Clone NameB6Ng01-104G10
Chromosome8 (Build37)
Map Location 97,507,196 - 97,638,906
singlet/doubletdoublet
Overlap geneGpr56, Gpr97, Gm770, Katnb1, Kifc3
Upstream geneAmfr, Nudt21, Ogfod1, Bbs2, Mt4, Mt3, Mt2, Mt1, Nup93, LOC100041555, Slc12a3, Herpud1, EG434339, AI451557, Cpne2, 2310065K24Rik, Rspry1, Arl2bp, Pllp, Ccl22, Cx3cl1, 1700121C10Rik, Ccl17, Ciapin1, LOC664947, Coq9, Polr2c, Dok4, LOC100040942, Ccdc102a, Gpr114
Downstream geneBC016201, Map1lc3-ps6, 1700055M20Rik, Zfp319, AA960436, Mmp15, Gtl3, Csnk2a2, 4933406B17Rik, Ccdc113, 4931432M23Rik, EG546088, LOC100041040, Gins3, LOC547022, Ndrg4, Setd6, Cnot1, LOC100041953, LOC100041088, BC031853, LOC100041972, Got2, LOC667445
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-104G10.bB6Ng01-104G10.g
ACCDH912713DH912714
length528572
definitionDH912713|Mus musculus domesticus DNA, BAC clone: B6Ng01-104G10, 5' end.DH912714|Mus musculus domesticus DNA, BAC clone: B6Ng01-104G10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,507,196 - 97,507,723)(97,638,353 - 97,638,906)
sequence
gaattccttgagactcattaattgtctgggcaggtgctgggaagcaggga
ggaggcgggaaggctggaactcagcgagtgtgattgctgttaccgccatt
attgttattgttgccacttgccctcattaggttgtgaaatcctcctgggc
gcttcatttggctcacacagtatggagtatgggagagcagagataggagc
ctttactctggagggccatgcttatccaaaacatacccccccacacccgc
cccgtgccttccccctctcccccctcccacctccacctccacccacaccc
ctgccgtgcaggacctgtgaacctcagccagaatagccaacagacagcag
ccagagtgggcatgatggggttggcccattttcaaattgctctttctgag
gttttggaagggctctttacctgagcctcagtttcctatttggctcagct
gacagactcaaaaaaaggttatttccagaagtccctggtgtgtttgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtt
gaattccagaagattgaatctccgagtttaaggaacacacatttaatctg
ggctacgcctttcatctgggattaaaggtgtggtggaacacacctttaat
ctgggctacaccttctgctggagacaatataaggacattggaagaaggga
gtctagcttcttgctcttgctccttcgcctgcttgctgcgtgagactgag
taactgctagatccttggacttccattcacagctgcgactgaacaattgt
tgggaattggctgccgactgtaagtcatcaataaattcctttactatcta
gagactatctgtaagttctgtgactctagagaaccctgactaatatactg
ggacagcagaatggtcgggtgggctgtgtgtgtggtggggtttactgcct
tgatcccccaggggctccaggtgaaatgacaattcagccaggctctatag
ttagtaccctcggcaaagcccccctctctctctctcctctctctctctct
ctctctctctctctctcttttgcctgagatagctgctgaccacactaccc
aggcgaggtgggaggtagaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_97507196_97507723
seq2: B6Ng01-104G10.b_41_568

seq1  GAATTCCTTGAGACTCATTAATTGTCTGGGCAGGTGCTGGGAAGCAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGAGACTCATTAATTGTCTGGGCAGGTGCTGGGAAGCAGGGA  50

seq1  GGAGGCGGGAAGGCTGGAACTCAGCGAGTGTGATTGCTGTTACCGCCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCGGGAAGGCTGGAACTCAGCGAGTGTGATTGCTGTTACCGCCATT  100

seq1  ATTGTTATTGTTGCCACTTGCCCTCATTAGGTTGTGAAATCCTCCTGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTATTGTTGCCACTTGCCCTCATTAGGTTGTGAAATCCTCCTGGGC  150

seq1  GCTTCATTTGGCTCACACAGTATGGAGTATGGGAGAGCAGAGATAGGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCATTTGGCTCACACAGTATGGAGTATGGGAGAGCAGAGATAGGAGC  200

seq1  CTTTACTCTGGAGGGCCATGCTTATCCAAAACATACCCCCCCACACCCGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTCTGGAGGGCCATGCTTATCCAAAACATACCCCCCCACACCCGC  250

seq1  CCCGTGCCTTCCCCCTCTCCCCCCTCCCACCTCCACCTCCACCCACACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTGCCTTCCCCCTCTCCCCCCTCCCACCTCCACCTCCACCCACACCC  300

seq1  CTGCCGTGCAGGACCTGTGAACCTCAGCCAGAATAGCCAACAGACAGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCGTGCAGGACCTGTGAACCTCAGCCAGAATAGCCAACAGACAGCAG  350

seq1  CCAGAGTGGGCATGATGGGGTTGGCCCATTTTCAAATTGCTCTTTCTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTGGGCATGATGGGGTTGGCCCATTTTCAAATTGCTCTTTCTGAG  400

seq1  GTTTTGGAAGGGCTCTTTACCTGAGCCTCAGTTTCCTATTTGGCTCAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGGAAGGGCTCTTTACCTGAGCCTCAGTTTCCTATTTGGCTCAGCT  450

seq1  GACAGACTCAAAAAAAGGTTATTTCCAGAAGTCCCTGGTGTGTTTGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACTCAAAAAAAGGTTATTTCCAGAAGTCCCTGGTGTGTTTGTGTG  500

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTT  528
      ||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTT  528

seq1: chr8_97638353_97638906
seq2: B6Ng01-104G10.g_88_641 (reverse)

seq1  ACCTCTACCTCCCACCTCGCCTGGGTAGTGTGGTCAGCAGCTATCTCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTACCTCCCACCTCGCCTGGGTAGTGTGGTCAGCAGCTATCTCAGG  50

seq1  CAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAGAGAGAGG  100

seq1  GGGGCTTTGCCGAGGGTACTAACTATAGAGCCTGGCTGAATTGTCATTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTTTGCCGAGGGTACTAACTATAGAGCCTGGCTGAATTGTCATTTC  150

seq1  ACCTGGAGCCCCTGGGGGATCAAGGCAGTAAACCCCACCACACACACAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGAGCCCCTGGGGGATCAAGGCAGTAAACCCCACCACACACACAGC  200

seq1  CCACCCGACCATTCTGCTGTCCCAGTATATTAGTCAGGGTTCTCTAGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCGACCATTCTGCTGTCCCAGTATATTAGTCAGGGTTCTCTAGAGT  250

seq1  CACAGAACTTACAGATAGTCTCTAGATAGTAAAGGAATTTATTGATGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAACTTACAGATAGTCTCTAGATAGTAAAGGAATTTATTGATGACT  300

seq1  TACAGTCGGCAGCCAATTCCCAACAATTGTTCAGTCGCAGCTGTGAATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTCGGCAGCCAATTCCCAACAATTGTTCAGTCGCAGCTGTGAATGG  350

seq1  AAGTCCAAGGATCTAGCAGTTACTCAGTCTCACGCAGCAAGCAGGCGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCAAGGATCTAGCAGTTACTCAGTCTCACGCAGCAAGCAGGCGAAG  400

seq1  GAGCAAGAGCAAGAAGCTAGACTCCCTTCTTCCAATGTCCTTATATTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGAGCAAGAAGCTAGACTCCCTTCTTCCAATGTCCTTATATTGTC  450

seq1  TCCAGCAGAAGGTGTAGCCCAGATTAAAGGTGTGTTCCACCACACCTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCAGAAGGTGTAGCCCAGATTAAAGGTGTGTTCCACCACACCTTTA  500

seq1  ATCCCAGATGAAAGGCGTAGCCCAGATTAAATGTGTGTTCCTTAAACTCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGATGAAAGGCGTAGCCCAGATTAAATGTGTGTTCCTTAAACTCG  550

seq1  GAGA  554
      ||||
seq2  GAGA  554