BAC Information

Click to search

BAC

Clone NameB6Ng01-105A13
Chromosome8 (Build37)
Map Location 32,047,989 - 32,048,806
singlet/doubletsinglet
Overlap genenone
Upstream geneEG628189
Downstream geneLOC547008, Dusp26, Rnf122, BC019943, Rbm13, Fut10, LOC666330, LOC666568, 7420700N18Rik, LOC100041329, EG330731, LOC100041340, Nrg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105A13.bB6Ng01-105A13.g
ACCDH913164DH913165
length1,091825
definitionDH913164|Mus musculus domesticus DNA, BAC clone: B6Ng01-105A13, 5' end.DH913165|Mus musculus domesticus DNA, BAC clone: B6Ng01-105A13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactctacagcactcatttacaaactgggcgcagtagcatgaacc
tgtaatgcaatgccatagactaggtgctctataaacaaccaaacgtgttt
tttccagttccagacattgagaagctcaaggtcaaggtgcagctgtattt
ggtgtctggtgggagctggtcctttcctggtttgttgagggtcactgtgt
tgtatcttcacaccgcagagagagctctatttcctttcctttctctcttt
tcttacacaggcactaattctattatggcaatcctaccctattgatctca
tcaaagcttaattaatttctgtcctagtttgctgctctccgttgctgtga
taagacactgaccaaaccaggagtagggaaaagggttttctgcgttagaa
ttcctatccctgagtccatcaaggagggaagtcagggcaagaactcgagg
tgggaatctggaggcaggaactgaagcagggaccatagaggaacactgct
agaagttctaggaccagtgaagtggagacttctagtttctttggaacgtt
agttgtgctacatgatgttttgctggagcagtcatgggaaagaatgtttt
cctgaagcacacacaggtgaaaaggatgttttgatatagcaaatatgtgg
aaggacccgggatgaaggagtataaatatgaccccaccaacagtgggaga
aaccactgagcattggggtttggtttgctccaccttgctattcttcgctg
atgacactcatgtattggttccccttacacagcgttgttgggctcaacct
gtgttaacaccaccattgagagaacctcacctaagaactgctcgagattc
cttgcccattccaactgaggtctctcctcagttggttggtgagcttttca
gtttcttcagctgctggttagggcctggtgtctgcctgcctagaggcctg
gtctgcactgcggagtcatatttggtgtttgctcgaggactgaactgctg
ccatagaagatgagctggccccaaagaacctattgctgacaggatccact
tctcctagcctaaaactatcctcttcaggaaccttctggct
gaattcctggatgaatacgtggaggcagaacccatggatatagagggccc
cctctactaattagtaaactgagtctgggagtcggggccccttgatccct
gccacactgtttccaccctcgaaaccttgaaaagattattcaccagcctc
cagctgcagcattacagtcctaaaatggcaattgtaacatttgtctccca
gagtgtttgtgtggatgaaatgagaaattacatacaaagtgcttttggca
tagtgtttgacataagaaacgggagataatattattacaattaacattat
ttcattaaggagggaggctggcacccagctgcatctattcagaatgccaa
gcagtgagtggtcccacagcctgagaacactgagaggcagttgcaaagcc
agagtgggccacttggcaggggtttagggaagcttgcaagcttcatttga
aaataatggaaaagcacatttggtggtgtggtagcaaatgcaatacccat
agccagaaactgcccttggtttctccacagacacccactcactggcaatg
aggaccagaaggagaggctatagaaacttctacaagagtttcactgcagc
aaccaaagccttggaccccctcccatttccactctccttcagatgggtgg
aaatgtcaccactcattaaagcaaatgtcaaagatttgcttttaaacagg
gctaaacgaatagtcctccaagatttgactctaatggtcaaattagagag
tttgaaagcttaaaggggagttctgaaaaggttaagaaaaattaaaatat
ttcctgatacttaaattggagacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_32047989_32048806
seq2: B6Ng01-105A13.g_70_894

seq1  GAATTCCTGGATGAATACGTGGAGGCAGAACCCATGGATATAGAGGGCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGATGAATACGTGGAGGCAGAACCCATGGATATAGAGGGCCC  50

seq1  CCTCTACTAATTAGTAAACTGAGTCTGGGAGTCGGGGCCCCTTGATCCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACTAATTAGTAAACTGAGTCTGGGAGTCGGGGCCCCTTGATCCCT  100

seq1  GCCACACTGTTTCCACCCTCGAAACCTTGAAAAGATTATTCACCAGCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACTGTTTCCACCCTCGAAACCTTGAAAAGATTATTCACCAGCCTC  150

seq1  CAGCTGCAGCATTACAGTCCTAAAATGGCAATTGTAACATTTGTCTCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGCAGCATTACAGTCCTAAAATGGCAATTGTAACATTTGTCTCCCA  200

seq1  GAGTGTTTGTGTGGATGAAATGAGAAATTACATACAAAGTGCTTTTGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTTTGTGTGGATGAAATGAGAAATTACATACAAAGTGCTTTTGGCA  250

seq1  TAGTGTTTGACATAAGAAACGGGAGATAATATTATTACAATTAACATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTTTGACATAAGAAACGGGAGATAATATTATTACAATTAACATTAT  300

seq1  TTCATTAAGGAGGGAGGCTGGCACCCAGCTGCATCTATTCAGAATGCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTAAGGAGGGAGGCTGGCACCCAGCTGCATCTATTCAGAATGCCAA  350

seq1  GCAGTGAGTGGTCCCACAGCCTGAGAACACTGAGAGGCAGGTGCAAAGCC  400
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GCAGTGAGTGGTCCCACAGCCTGAGAACACTGAGAGGCAGTTGCAAAGCC  400

seq1  AGAGTGGGCCACTTGGCAGGGGTTTAGGGAAGCTTGCAAGCTTCATTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGGCCACTTGGCAGGGGTTTAGGGAAGCTTGCAAGCTTCATTTGA  450

seq1  AAATAATGGAAAAGCACATTTGGTGGTGTGGTAGCAAATGCAATACCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATGGAAAAGCACATTTGGTGGTGTGGTAGCAAATGCAATACCCAT  500

seq1  AGCCAGAAACTGCCCTTGGTTTCTCCACAGACACCCACTCACTGGCAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAAACTGCCCTTGGTTTCTCCACAGACACCCACTCACTGGCAATG  550

seq1  AGGACCAGAAGGAGAGGCTATAGAAACTTCTACAAGAGTTTCACTGCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCAGAAGGAGAGGCTATAGAAACTTCTACAAGAGTTTCACTGCAGC  600

seq1  AACCAAAGCCTTGGA-CCCCTCCCATTTCCACTCTCCTTCAGATGGGTGG  649
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AACCAAAGCCTTGGACCCCCTCCCATTTCCACTCTCCTTCAGATGGGTGG  650

seq1  AAATGTCACCACTCATTAAAGCAAATGTCAAAGA-TTGCTTTTAAACAGG  698
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAATGTCACCACTCATTAAAGCAAATGTCAAAGATTTGCTTTTAAACAGG  700

seq1  GCT-AACGAATAGTCCTCCAAGATTTGACTCTAATGGTCAAATTAGAGAG  747
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAACGAATAGTCCTCCAAGATTTGACTCTAATGGTCAAATTAGAGAG  750

seq1  TTTG-AAGCTTAAAGGGAAGTTCTG-AAAGGTTAAGAAAAAT--AAAAAA  793
      |||| |||||||||||| ||||||| ||||||||||||||||  ||| | 
seq2  TTTGAAAGCTTAAAGGGGAGTTCTGAAAAGGTTAAGAAAAATTAAAATAT  800

seq1  GTCCTGATACTGAAGTTGGAGACAC  818
       |||||||||| || ||||||||||
seq2  TTCCTGATACTTAAATTGGAGACAC  825