BAC Information

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BAC

Clone NameB6Ng01-105D14
Chromosome8 (Build37)
Map Location 54,405,393 - 54,406,679
singlet/doubletsinglet
Overlap genenone
Upstream gene1190028D05Rik, LOC676688
Downstream geneAga, Neil3, LOC100040107, Vegfc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105D14.bB6Ng01-105D14.g
ACCDH913304DH913305
length1,248607
definitionDH913304|Mus musculus domesticus DNA, BAC clone: B6Ng01-105D14, 5' end.DH913305|Mus musculus domesticus DNA, BAC clone: B6Ng01-105D14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacaccttggtaatctataaatgtggtaatctataaacttgctt
ccattatctttagaataagactacaggcattatttgcccaaacccatagt
tactaaactatgcctttctctttgactcttgatgccccctgaacccctaa
gactctggaaactgatcaaaagcaatcacatggtctttcattcatctctg
tgtcgcatcccactgcctcctttggtttcagaatttggacctttctagtt
gttctctgattccttcgaagaactgtttatgtgccaattagctcttaaac
ttaattcagcagagggttactctgaaacaaaaagtttattatgtccatga
atacaactgaactgaaacttttccatcctctcagtaacttgggcatcact
gaaagcagacaaggttgttgtttcagtcatctagtaccatgttcttctta
ttctgtctttaacttttctttgctatagtgtgacaatagtcttcaattta
caaccttaccattaaactactaaaagttcatttcatcaaatctaacataa
gatttccataatgattatattgttatggacatgaatacaaagaaagtttc
ctcccaagcacagttcagaatttcatatttggtatgacagtcttctactt
atataagatatttttccattaaaaatagtcaactatgaatgaactttatt
gatactgcagatgtctgttgaaatctgagtacaagtaaccctcagcaagt
tagagcatttcaactgctctgaactgggttatttaaaatctgctatccaa
aatctacttgaagcatccataactcagctaactcaagacataatcacaca
gtgggactttatatcccatatgctaaagtagttcattgaacaaaaatggt
gcattaatgtctacgattcagagaacttcaaagttaatattttgactttc
agccagttgaatgtgctaagtctatcgtggtaaatgagagatgtgaaaca
gctgcctgagaaataagtccacatgagatttttctcactatgagaataaa
acaaactctataaaaacatgtttggtaaaaatggaggagtgatagtatag
gttatttaacttagcttatataccatagtgttactggaattcattccatt
ccatcataatctgatggatataaataggatgagtttagaatcgtagtaga
ttagcattatgaacgttctggatcccgccgaggtggatgccatattta

gaattcagtgagtcagcgcagtggagttgtggtcatgaagttcagtgcag
gtcaacagagcaagttgaagccagagaataaggatccagaagattagaac
aaattgccagaggtagtttgaagccaagcagagcaatttggtgagaagtc
gagagaagccaggttgaatcagtcatcttggagaggcagttgggctacaa
gagctgagttggaacagccaaagttcaaagggaactagaaagaatgagct
tatgcaagagtaagcctagagatgacaattagatcagacaaataaaagtt
acttttacacatactgtttcctcagaaaacgaggcctagaaacatctttt
taaccaccagatacttgtactgccccctcttatttctaagtttcagaagg
cagccttctaccttaacgcttacaaagtgaacagcatgtttcactgtccc
atgaaattgtacaatagcacaaatgatgattttggttaggtttctgactt
cctcataagttactgatacttactaaggattctttttttattgtttgttt
tgttttttgtttttttttttgttttttgtttttgttgttgttgttgggtt
ttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_54405393_54406679
seq2: B6Ng01-105D14.b_47_1294

seq1  GAATTCCACACCTTGGTAATCTATAAATGTGGTAATCTATAAACTTGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACACCTTGGTAATCTATAAATGTGGTAATCTATAAACTTGCTT  50

seq1  CCATTATCTTTAGAATAAGACTACAGGCATTATTTGCCCAAACCCATAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTATCTTTAGAATAAGACTACAGGCATTATTTGCCCAAACCCATAGT  100

seq1  TACTAAACTATGCCTTTCTCTTTGACTCTTGATGCCCCCTGAACCCCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAACTATGCCTTTCTCTTTGACTCTTGATGCCCCCTGAACCCCTAA  150

seq1  GACTCTGGAAACTGATCAAAAGCAATCACATGGTCTTTCATTCATCTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTGGAAACTGATCAAAAGCAATCACATGGTCTTTCATTCATCTCTG  200

seq1  TGTCGCATCCCACTGCCTCCTTTGGTTTCAGAATTTGGACCTTTCTAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGCATCCCACTGCCTCCTTTGGTTTCAGAATTTGGACCTTTCTAGTT  250

seq1  GTTCTCTGATTCCTTCGAAGAACTGTTTATGTGCCAATTAGCTCTTAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTGATTCCTTCGAAGAACTGTTTATGTGCCAATTAGCTCTTAAAC  300

seq1  TTAATTCAGCAGAGGGTTACTCTGAAACAAAAAGTTTATTATGTCCATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTCAGCAGAGGGTTACTCTGAAACAAAAAGTTTATTATGTCCATGA  350

seq1  ATACAACTGAACTGAAACTTTTCCATCCTCTCAGTAACTTGGGCATCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAACTGAACTGAAACTTTTCCATCCTCTCAGTAACTTGGGCATCACT  400

seq1  GAAAGCAGACAAGGTTGTTGTTTCAGTCATCTAGTACCATGTTCTTCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCAGACAAGGTTGTTGTTTCAGTCATCTAGTACCATGTTCTTCTTA  450

seq1  TTCTGTCTTTAACTTTTCTTTGCTATAGTGTGACAATAGTCTTCAATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCTTTAACTTTTCTTTGCTATAGTGTGACAATAGTCTTCAATTTA  500

seq1  CAACCTTACCATTAAACTACTAAAAGTTCATTTCATCAAATCTAACATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTTACCATTAAACTACTAAAAGTTCATTTCATCAAATCTAACATAA  550

seq1  GATTTCCATAATGATTATATTGTTATGGACATGAATACAAAGAAAGTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCATAATGATTATATTGTTATGGACATGAATACAAAGAAAGTTTC  600

seq1  CTCCCAAGCACAGTTCAGAATTTCATATTTGGTATGACAGTCTTCTACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAAGCACAGTTCAGAATTTCATATTTGGTATGACAGTCTTCTACTT  650

seq1  ATATAAGATATTTTTCCATTAAAAATAGTCAACTATGAATGAACTTTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGATATTTTTCCATTAAAAATAGTCAACTATGAATGAACTTTATT  700

seq1  GATACTGCAGATGTCTGTTGAAATCTGAGTACAAGTAACCCTCAGCAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTGCAGATGTCTGTTGAAATCTGAGTACAAGTAACCCTCAGCAAGT  750

seq1  TAGAGCATTTCAAACTGCTCTGAACTGGGTTATTTAAAATCTGCTATCCA  800
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCATTTC-AACTGCTCTGAACTGGGTTATTTAAAATCTGCTATCCA  799

seq1  AAATCTACTTGAAGCATCCATAACTCAGCTAACTCAAGACATAATCACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTACTTGAAGCATCCATAACTCAGCTAACTCAAGACATAATCACAC  849

seq1  AGTGGGACTTTATATCCCATATGCTAAAGTAGTTCATTGAACAAAAATGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGACTTTATATCCCATATGCTAAAGTAGTTCATTGAACAAAAATGG  899

seq1  TGCATTAATGTCTACGATTCAGAGAACTTCAAAGTTAATATTTTGACTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTAATGTCTACGATTCAGAGAACTTCAAAGTTAATATTTTGACTTT  949

seq1  CAGCCAGTTGAATGTGCTAAGTCTATCGTGGTAAATGAGAGATGTTGAAA  1000
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CAGCCAGTTGAATGTGCTAAGTCTATCGTGGTAAATGAGAGATG-TGAAA  998

seq1  CAGCTGCCTGGAGAAATTAGTCCACATGAGATTTTTCTCCACTATGAGAA  1050
      ||||||||| ||||||| |||||||||||||||||||| |||||||||||
seq2  CAGCTGCCT-GAGAAATAAGTCCACATGAGATTTTTCT-CACTATGAGAA  1046

seq1  TAAAAACAAACTCTTATAAAAACAAATGTTTTTGGTAAAAAATGGAGGAA  1100
      | ||||||||||| ||||||||||    | |||||| |||||||||||| 
seq2  T-AAAACAAACTC-TATAAAAACA----TGTTTGGT-AAAAATGGAGGA-  1088

seq1  GGTGATAGTATTAGGTTATTTAAAACTTAGCTTATTATACACATAATTGT  1150
       ||||||||| ||||||||||  ||||||||||| ||||| |||| |  |
seq2  -GTGATAGTA-TAGGTTATTT--AACTTAGCTTA-TATAC-CATAGTGTT  1132

seq1  ACTGGATTTCATTCCTATTCATTCCTATATATCCCTATTAGTATAAAATA  1200
      |||||| |||||||     ||||||   |||  |  ||   ||| |||||
seq2  ACTGGAATTCATTC-----CATTCCATCATAATCTGATGGATAT-AAATA  1176

seq1  AGAATAGAAGTTTATGGGAATCAGTAAGATAGATCAGCAATTTAAATTGC  1250
       |   |  ||||||   ||||| |||   ||||| ||||  |||   || 
seq2  GG---ATGAGTTTA---GAATC-GTA--GTAGATTAGCA--TTA---TGA  1212

seq1  ACCTGTTCTGATTCCCAGC-AAGTTGATGCCATATTTA  1287
      ||  ||||||  ||||  | | || |||||||||||||
seq2  AC--GTTCTGGATCCCGCCGAGGTGGATGCCATATTTA  1248


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