BAC Information

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BAC

Clone NameB6Ng01-105N02
Chromosome8 (Build37)
Map Location 68,179,308 - 68,180,401
singlet/doubletsinglet
Overlap geneMarch1
Upstream geneSc4mol, Klhl2, LOC100040903, LOC619647, 3110005G23Rik, Trim75, Trim60, LOC665388, LOC665396, LOC100040949, LOC665405, Vaultrc-ps1, LOC100040967
Downstream geneLOC100040986, 1810029B16Rik, Tktl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105N02.bB6Ng01-105N02.g
ACCDH913734DH913735
length1,2171,092
definitionDH913734|Mus musculus domesticus DNA, BAC clone: B6Ng01-105N02, 5' end.DH913735|Mus musculus domesticus DNA, BAC clone: B6Ng01-105N02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaatagactggaccagaaaagaaatttctcctgacacataata
atcagaacaacaaatgcactaaataaagatagaatattaaaagcagtaag
ggagaaaggtcaagtaacatataaaggaaggcctatcagaattacaccag
acttttcaccagagactatgaaagccagaagagcctggacagatgttata
tagacactaagagaacacaaatggcagcacaggctaatatacccggccaa
actctcaattaccatagatggagaaaccaaagtattccacaacaaataca
aattcacacaatatctttccacaaatccagcccttcaaaggataataaga
gaaaagaagcaatacaaggacagaaatcacgccctagaacaagtaagaaa
gtaatccctcaacaaaccaaaaagaagacagccacaagaacagaatgcca
actctaacaacaaaaataaaaggaagcaacaattacttttccttaatatc
tcttaatatcaatggactcaattccccaataaaaagacatagactaacag
actggctacacaaacaggacccaacattctgctgcttacaggaaacccat
ctcagggaaaaagacagacactacctcagagtgaaaggctggaaaacaat
tttccaagcaaatggtctgaagaaacaagctggagtagccattctaatat
cggataaaatcgacttccaacccaaagttatcaaaaaagacaaggaggga
cacttcatactcatcaaaggtaaaatcctccaagaggaactctcaattct
gaatatctacgctccaaatgcaagggcagccacattcattaaagacactt
tagtaaagctcaaagcacaaatttcacctcacacaataatagtgggagac
ttcaacacaccactttcatcaatggacagattgtggaaacagaaactaaa
cagggacacagtgaaactaacagaagttatgaaacaaatggatctgacag
atatctacagaacatttatcctaaaacaaaagatatacttcttctcagca
cctccacgggacttctcaatgacatataatgtcacaaaacagcctcaaca
gatacaaaaaatttgaatggtcccatgtatctatcaggtcacaatgctta
gactgatctcaatacactattatgagcactttcacgggtggaactgtaac
aacacttctttctcagt
gaattcctatccctatcctagccatcctcgtgaacagagttttgatctaa
caagcatatgatcttagctgtaaggcccctcatgggttagtttttaattc
aataattctaagaggagattgtattaagcagatgtgaatattttagtgct
aaattttaaaaggagcagtttacataagcattgaaacaactttgggcttt
atcacctggaaaacaagagttcgtttatttgtttgcttgtttgtttgtca
acgccattcatctctctgaaggaagttgaggaccgtcttcccgtgactcc
ttgatgtcctggtttctcagtaacatccactgggaagcttgaggtgcaga
ctaatattagcctaccaacagctgaacaaacactcacatcagcaattcct
gtgccttctccccaggtttagtcacagtgataactccaagtctattaatc
cttcccaaaataacattgtccacacaccaaggaccatacgtttacgactt
ctatgcaagacacagcattttatacctcctaggtactcaaccaatgggac
taagtaatatcacttcctgtagagaacataaaagctgtattggagtatgg
agaatgtttgtgccactacaactgatcttttaaaaggtggccttaaatag
tcatggagaacttccagacctacgctcccttgaagaagtgtagaaaagag
attcggaagtcatgctctcattttcttacaggcatggtatagcacagaat
tctgcatagaagcctggcatttaaacaaaataactgaacagcaagttagg
ctctaaggttttttctctaagtctttccttcatcccaccatctcaactct
ataattaacacaattttgctcactcttttgagttttaaatcctaagtgcc
ataaaaatctagattccatgcaaggaaatgtttctttaacacattagtac
tggattggatgaaaggtttttattactatgtgaccttatatgtagatgat
aaacaagctggtgtaaaggggcctactttgtcagtactcttgtctgaaga
atgtgagagttaaactttatggggtaccttacccacacatcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_68179308_68180401
seq2: B6Ng01-105N02.g_68_1159 (reverse)

seq1  GGATGTGT-GGTAA-GTACCCCACTAAGTTTAACTCTTCACTATTC-TCA  47
      |||||||| ||||| ||||||||  ||||||||||| |||| |||| |||
seq2  GGATGTGTGGGTAAGGTACCCCATAAAGTTTAACTC-TCAC-ATTCTTCA  48

seq1  GACAAGAGTACTTGACAAAGTAGGCCCCTTTTACACTCAGC-TGTTTATC  96
      ||||||||||| |||||||||||||||| ||||||| |||| ||||||||
seq2  GACAAGAGTAC-TGACAAAGTAGGCCCC-TTTACAC-CAGCTTGTTTATC  95

seq1  ATCTACATTATAAGGTCACATAGTAATAAAAACC-TTCATCCAATCCAGT  145
      ||||||| |||||||||||||||||||||||||| |||||||||||||||
seq2  ATCTACA-TATAAGGTCACATAGTAATAAAAACCTTTCATCCAATCCAGT  144

seq1  AACTAATGTGTTAAAGAAACATTTCCTTGCATGGAATCTAGATTTTTATG  195
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -ACTAATGTGTTAAAGAAACATTTCCTTGCATGGAATCTAGATTTTTATG  193

seq1  GCACTTAGGATTTAAAACTCAAAAGAGTGAGCAAAATTGTGTTAATTATA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTAGGATTTAAAACTCAAAAGAGTGAGCAAAATTGTGTTAATTATA  243

seq1  GAGTTGAGATGGTGGGATGAAGGAAAGACTTAGAGAAAAAACCTTAGAGC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGAGATGGTGGGATGAAGGAAAGACTTAGAGAAAAAACCTTAGAGC  293

seq1  CTAACTTGCTGTTCAGTTATTTTGTTTAAATGCCAGGCTTCTATGCAGAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTTGCTGTTCAGTTATTTTGTTTAAATGCCAGGCTTCTATGCAGAA  343

seq1  TTCTGTGCTATACCATGCCTGTAAGAAAATGAGAGCATGACTTCCGAATC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGCTATACCATGCCTGTAAGAAAATGAGAGCATGACTTCCGAATC  393

seq1  TCTTTTCTACACTTCTTCAAGGGAGCGTAGGTCTGGAAGTTCTCCATGAC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCTACACTTCTTCAAGGGAGCGTAGGTCTGGAAGTTCTCCATGAC  443

seq1  TATTTAAGGCCACCTTTTAAAAGATCAGTTGTAGTGGCACAAACATTCTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAGGCCACCTTTTAAAAGATCAGTTGTAGTGGCACAAACATTCTC  493

seq1  CATACTCCAATACAGCTTTTATGTTCTCTACAGGAAGTGATATTACTTAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTCCAATACAGCTTTTATGTTCTCTACAGGAAGTGATATTACTTAG  543

seq1  TCCCATTGGTTGAGTACCTAGGAGGTATAAAATGCTGTGTCTTGCATAGA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTGGTTGAGTACCTAGGAGGTATAAAATGCTGTGTCTTGCATAGA  593

seq1  AGTCGTAAACGTATGGTCCTTGGTGTGTGGACAATGTTATTTTGGGAAGG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGTAAACGTATGGTCCTTGGTGTGTGGACAATGTTATTTTGGGAAGG  643

seq1  ATTAATAGACTTGGAGTTATCACTGTGACTAAACCTGGGGAGAAGGCACA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATAGACTTGGAGTTATCACTGTGACTAAACCTGGGGAGAAGGCACA  693

seq1  GGAATTGCTGATGTGAGTGTTTGTTCAGCTGTTGGTAGGCTAATATTAGT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTGCTGATGTGAGTGTTTGTTCAGCTGTTGGTAGGCTAATATTAGT  743

seq1  CTGCACCTCAAGCTTCCCAGTGGATGTTACTGAGAAACCAGGACATCAAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACCTCAAGCTTCCCAGTGGATGTTACTGAGAAACCAGGACATCAAG  793

seq1  GAGTCACGGGAAGACGGTCCTCAACTTCCTTCAGAGAGATGAATGGCGTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCACGGGAAGACGGTCCTCAACTTCCTTCAGAGAGATGAATGGCGTT  843

seq1  GACAAACAAACAAGCAAACAAATAAACGAACTCTTGTTTTCCAGGTGATA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAACAAACAAGCAAACAAATAAACGAACTCTTGTTTTCCAGGTGATA  893

seq1  AAGCCCAAAGTTGTTTCAATGCTTATGTAAACTGCTCCTTTTAAAATTTA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCAAAGTTGTTTCAATGCTTATGTAAACTGCTCCTTTTAAAATTTA  943

seq1  GCACTAAAATATTCACATCTGCTTAATACAATCTCCTCTTAGAATTATTG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAAAATATTCACATCTGCTTAATACAATCTCCTCTTAGAATTATTG  993

seq1  AATTAAAAACTAACCCATGAGGGGCCTTACAGCTAAGATCATATGCTTGT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAAACTAACCCATGAGGGGCCTTACAGCTAAGATCATATGCTTGT  1043

seq1  TAGATCAAAACTCTGTTCACGAGGATGGCTAGGATAGGGATAGGAATTC  1094
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCAAAACTCTGTTCACGAGGATGGCTAGGATAGGGATAGGAATTC  1092