BAC Information

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BAC

Clone NameB6Ng01-105P02
Chromosome8 (Build37)
Map Location 15,265,746 - 15,410,198
singlet/doubletdoublet
Overlap genenone
Upstream geneDlgap2, C030037F17Rik, Cln8, Arhgef10, 2900016B01Rik, 5830468F06Rik, Kbtbd11, BB014433, Myom2, EG665599
Downstream geneEG234097, EG665619, LOC634008, Csmd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105P02.bB6Ng01-105P02.g
ACCDH913828DH913829
length7741,084
definitionDH913828|Mus musculus domesticus DNA, BAC clone: B6Ng01-105P02, 5' end.DH913829|Mus musculus domesticus DNA, BAC clone: B6Ng01-105P02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,409,425 - 15,410,198)(15,265,746 - 15,266,565)
sequence
gaattctcaacagaggaattatgaatgcacaagaagaacttagcgaaatg
ttcaacatccagagtcatcagagaaatgcaaatcaaaatgaccctgaaat
tccattttatacccatcagaatggctaaaatcaaaaactcaagtgacagt
acagattggtgaggatgtggaacaaggggacactcttccattgctggtag
gagtggtaacttctacaaccactttggaaaaccaggagaaggaagagcaa
cgattggaatgtaaagtgaataattaactaattaacagaaaaaaattact
tttattattcctttacttaaaagaccttgtttttcaatgactgctctcag
taaccaaatgtcttcgtctcgttggtaaatgattggaggttttcagatgt
aagaaaaaaatagtttatgtaagttgtgaaggcctaggggtatgaaagaa
aatgaatgaacacaggttgtaaaggtctgaggagatgatgaaaggaatgt
gaaagctgagacttgaggaggatgaatatgatgttaaaacctcagagttc
caggtgtgacactaaccaacgcatttctgataaactgttcatctaacctt
ggtgaagctctgcttactctcaccacagtcagaggctcagaagtgtcgtt
tcctttgcttgttttcaaattatggacttagaggtgctattcacttgatg
caccaggatgggggagacccagggggccccacctactcagaggagaagag
gagggggtatgggggacagattgt
gaattcaaggccagcctgggacagagaaagttctagatgaagtttaggtc
caggtatggtggtacatacctttaatcccagcattcgggatcaaggccag
tctacagagtaagttccatgacagccaagcgtaggcagtgaaggagtggg
aaaacagaaagctggtgataatgtcatagagcaatgaggccatgatccag
ctcctgcaagcagcagaactcagcagctttgggctgtatatagttatggg
acttaggtcataaaatgctgatttgtgatataatcaaaagggaacctggg
ataaatgattgattgaattcctaaggaagtagcttatgcaaagtaaaaga
ctgggctttgctctgcaacaaagagttatctcaagcagagaactatttaa
ctcaagaagagcacagaactgacagcttgcatcctccactgactcagaat
catttaccactcccaaacacccctttctcaggaccctttcccaagttgat
gctggtcttcaacaaacatcccctgatgagttgatgaacagatatggtac
ccaggtaaaatgaaatactatttcacctttgaaaaagaaggcaattctaa
agtatggctgaaccctgagggcgtactaggtgatttaaactaggcacaaa
gggcaaagacttgtgactgctcttatctgaggcaggagagtggtcactct
caggggctaaaattatattggtggttacaaggattacagggttggcatgg
gaacagatattgaaggggttcagaggtcacagtatgaatgtagaaccata
cagagctgtttggtggtagtagcatcgtggtgtattgtacttgaggcctc
tgcaaatggtagacactccactggtgttattttgccacaatgggcaaaaa
aagccaacaagctctcctggggtgtgtttggatcagtgagtcatttggtc
agtggaagtggattttgaggacagtggtgagacagttggggctgtggagc
agtccaagcaccagagcagccagatgtttatttgaaatgcgcctgccttt
tggaagcatatctcttaattaccgtcctttgata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_15409425_15410198
seq2: B6Ng01-105P02.b_48_821 (reverse)

seq1  ACAATCTGTCCCCCATACCCCCTCCTCTTCTCCTCTGAGTAGGTGGGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCTGTCCCCCATACCCCCTCCTCTTCTCCTCTGAGTAGGTGGGGCC  50

seq1  CCCTGGGTCTCCCCCATCCTGGTGCATCAAGTGAATAGCACCTCTAAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGGTCTCCCCCATCCTGGTGCATCAAGTGAATAGCACCTCTAAGTC  100

seq1  CATAATTTGAAAACAAGCAAAGGAAACGACACTTCTGAGCCTCTGACTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTTGAAAACAAGCAAAGGAAACGACACTTCTGAGCCTCTGACTGT  150

seq1  GGTGAGAGTAAGCAGAGCTTCACCAAGGTTAGATGAACAGTTTATCAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGAGTAAGCAGAGCTTCACCAAGGTTAGATGAACAGTTTATCAGAA  200

seq1  ATGCGTTGGTTAGTGTCACACCTGGAACTCTGAGGTTTTAACATCATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGTTGGTTAGTGTCACACCTGGAACTCTGAGGTTTTAACATCATATT  250

seq1  CATCCTCCTCAAGTCTCAGCTTTCACATTCCTTTCATCATCTCCTCAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCCTCAAGTCTCAGCTTTCACATTCCTTTCATCATCTCCTCAGAC  300

seq1  CTTTACAACCTGTGTTCATTCATTTTCTTTCATACCCCTAGGCCTTCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACAACCTGTGTTCATTCATTTTCTTTCATACCCCTAGGCCTTCACA  350

seq1  ACTTACATAAACTATTTTTTTCTTACATCTGAAAACCTCCAATCATTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTACATAAACTATTTTTTTCTTACATCTGAAAACCTCCAATCATTTAC  400

seq1  CAACGAGACGAAGACATTTGGTTACTGAGAGCAGTCATTGAAAAACAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGAGACGAAGACATTTGGTTACTGAGAGCAGTCATTGAAAAACAAGG  450

seq1  TCTTTTAAGTAAAGGAATAATAAAAGTAATTTTTTTCTGTTAATTAGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTAAGTAAAGGAATAATAAAAGTAATTTTTTTCTGTTAATTAGTTA  500

seq1  ATTATTCACTTTACATTCCAATCGTTGCTCTTCCTTCTCCTGGTTTTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCACTTTACATTCCAATCGTTGCTCTTCCTTCTCCTGGTTTTCCA  550

seq1  AAGTGGTTGTAGAAGTTACCACTCCTACCAGCAATGGAAGAGTGTCCCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGTTGTAGAAGTTACCACTCCTACCAGCAATGGAAGAGTGTCCCCT  600

seq1  TGTTCCACATCCTCACCAATCTGTACTGTCACTTGAGTTTTTGATTTTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCACATCCTCACCAATCTGTACTGTCACTTGAGTTTTTGATTTTAG  650

seq1  CCATTCTGATGGGTATAAAATGGAATTTCAGGGTCATTTTGATTTGCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTGATGGGTATAAAATGGAATTTCAGGGTCATTTTGATTTGCATT  700

seq1  TCTCTGATGACTCTGGATGTTGAACATTTCGCTAAGTTCTTCTTGTGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGATGACTCTGGATGTTGAACATTTCGCTAAGTTCTTCTTGTGCAT  750

seq1  TCATAATTCCTCTGTTGAGAATTC  774
      ||||||||||||||||||||||||
seq2  TCATAATTCCTCTGTTGAGAATTC  774

seq1: chr8_15265746_15266565
seq2: B6Ng01-105P02.g_347_1152

seq1  TATAATCAAAAGGGAACCTGGGATAAATGATTGATTGAATTCCTAAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATCAAAAGGGAACCTGGGATAAATGATTGATTGAATTCCTAAGGAA  50

seq1  GTAGCTTATGCAAAGTAAAAGACTGGGCTTTGCTCTGCAACAAAGAGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTTATGCAAAGTAAAAGACTGGGCTTTGCTCTGCAACAAAGAGTTA  100

seq1  TCTCAAGCAGAGAACTATTTAACTCAAGAAGAGCACAGAACTGACAGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGCAGAGAACTATTTAACTCAAGAAGAGCACAGAACTGACAGCTT  150

seq1  GCATCCTCCACTGACTCAGAATCATTTACCACTCCCAAACACCCCTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCTCCACTGACTCAGAATCATTTACCACTCCCAAACACCCCTTTCT  200

seq1  CAGGACCCTTTCCCAAGTTGATGCTGGTCTTCAACAAACATCCCCTGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACCCTTTCCCAAGTTGATGCTGGTCTTCAACAAACATCCCCTGATG  250

seq1  AGTTGATGAACAGATATGGTACCCAGGTAAAATGAAATACTATTTCACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGATGAACAGATATGGTACCCAGGTAAAATGAAATACTATTTCACCT  300

seq1  TTGAAAAAGAAGGCAATTCTAAAGTATGGCTGAACCCTGAGGGCGTACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAAGAAGGCAATTCTAAAGTATGGCTGAACCCTGAGGGCGTACTA  350

seq1  GGTGATTTAAACTAGGCACAAAGGGCAAAGACTTGTGACTGCTCTTATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATTTAAACTAGGCACAAAGGGCAAAGACTTGTGACTGCTCTTATCT  400

seq1  GAGGCAGGAGAGTGGTCACTCTCAGGGGCTAAAATTATATTGGTGGTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGGAGAGTGGTCACTCTCAGGGGCTAAAATTATATTGGTGGTTAC  450

seq1  AAGGATTACAGGGTTGGCATGGGAACAGATATTGAAGGGGTTCAGAGGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTACAGGGTTGGCATGGGAACAGATATTGAAGGGGTTCAGAGGTC  500

seq1  ACAGTATGAATGTAGAACCATACAGAGCTGTTTGGTGGTAGTAGCATCGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTATGAATGTAGAACCATACAGAGCTGTTTGGTGGTAGTAGCATCGT  550

seq1  GGTGTATTGTACTTGAGGCCTCTGCAAATGGTAGACACTCCACTGGTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTATTGTACTTGAGGCCTCTGCAAATGGTAGACACTCCACTGGTGTT  600

seq1  ATTTTGCCACAATGGGCAAAAAAAGCCAACAAGCTCTCCTGGGGTGTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCCACAATGGGCAAAAAAAGCCAACAAGCTCTCCTGGGGTGTGTT  650

seq1  TGGATCAGTGAGTTCATTTGGGTCAGTGGAAGGTGGATTTTGAGGGACAG  700
      |||||||||||| |||||| ||||||||||| ||||||||||| ||||||
seq2  TGGATCAGTGAG-TCATTT-GGTCAGTGGAA-GTGGATTTTGA-GGACAG  696

seq1  TGGTGAGGACAGTTGGGGCTTGTGGAGCAAGTCAAAAGCCACCAGAGCAG  750
      |||||| |||||||||||| |||||||| |||| ||   |||||||||||
seq2  TGGTGA-GACAGTTGGGGC-TGTGGAGC-AGTCCAA--GCACCAGAGCAG  741

seq1  CCCAGATGTTTATTTGAGAGTCGCCTGCCTTTTTGAAAGCATTTTCTTCT  800
       |||||||||||||||| |  |||||||| ||||| ||||| | |||   
seq2  -CCAGATGTTTATTTGAAATGCGCCTGCC-TTTTGGAAGCA-TATCT--C  786

seq1  TTAATTTACGTCCTTTGATA  820
      ||||||  ||||||||||||
seq2  TTAATTACCGTCCTTTGATA  806