BAC Information

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BAC

Clone NameB6Ng01-106M16
Chromosome8 (Build37)
Map Location 103,466,248 - 103,467,436
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042069, LOC436054, LOC100042078, LOC100042086, LOC100042092, LOC384895
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106M16.bB6Ng01-106M16.g
ACCDH914433DH914434
length1,1721,105
definitionDH914433|Mus musculus domesticus DNA, BAC clone: B6Ng01-106M16, 5' end.DH914434|Mus musculus domesticus DNA, BAC clone: B6Ng01-106M16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtctttgatttttctttggttgtaaaaattaaacataaatgat
acacgggaagaataaaatgctctgtgatttttattgcagtcagttagttt
ttaataaaaatgaaaagtggctgcttgagagggtcagctctattagcatg
catttaaacattttccaatattagcactgcattccagcatgaactgggag
ttgactgtgatctgagccagcatcctgagcctctcaccttcgctcagcta
agccttgtgaatccactctctcatgcctgtgccacccactccaagtattc
tttccttttgcgcatttaagcacaggacagatcctgtgctgtcgcttacc
cagggcaacagctatgctcattcctttcccagtgattatgccaaggacag
aaaatgcccctaaattaatccatcatgctggtgcaaattctaatgagtgg
gaaatgccaggaatgatccattatcgctgcaattggaaaatcataatatc
atagttcagcctgagcaactagtaaagaaaatctctgaagcatgtcatga
aggctggatatggaaagcaatctctggtctgggagttgcctcggtggggc
actaactgatttatatgtccacacagctatgccatccacgtgtccagaca
ttaccccagagtacctgtgtatgctcaccctggtgtttgaaaaactacat
tattttttctgagttgagtcttaataggtcactggaccaaatgcaatgcc
acagtgccctcaagtggccccagaatttagacttcctgggtttggcagga
tttttacttccagaactttaaaatgatttttatatgtcattttaagaaaa
gttaggtaatatgaataagaaaaaccaaatcaactaaaacataagtgctt
tatctatcttccaaaatcacagtttagcgctcatacttcctgccttcatc
ttacttttttttcctgtgccttaatattcatgtatacatataaactcaat
tcagatgatataggttgattagatgattattctgcacaggttcatatgca
ctgatgtggtctaataacatgaagttgcctttctctctgcatcacatagg
agacttcgggaaactaataacattccttccacatggacagtaagtctgaa
gacaatcggagagctttagtcc
gaattcaaacaggttttgcaggtggtttagagcacggtggaaatgggaac
agaggatcaggtaaaggaggaaggggcagagagaaaaagtacagggaaag
acaactgaaatagggggtattggggtgtgttatacgaaaaccttgtgtaa
tggaagctccctgtaacctaagagggtgacttagagagggtgcctagtaa
tgaaggatatggaacttgaattggttgtcttccataaccagcatggctcc
tagtattagaaaagggaaccaacgaagccacaaaattttcaaaccatgtg
cccacaagatgtgctagggcaatgttggttcagagtttgtgagaatggcc
aaccaaagactggtgtagtttgagattccatctagaagagggagttcatg
cttacttaacactacttgggtggccaggaaccgacacagagaggcctatg
gtagaacaaacattaacagaaaaacaacaacaaaaaaacaaaacaaaaca
aaaaaaaaccaaaccaaaacaaaacaaacaaacaaaaaaaacagctaatg
gaattattcctaatagtattctgctatactcatagagtggtgcctagccc
aattgacattagataggcatccttgggtagttgattgaagcagatgtaga
gaaccacagaatcttgaggaatagggaggagaggattggagaggcaagaa
gattgtaggacaccatgagaatatggtccagaaaatcaactgaaccagtg
tttatagggcctcacagagagcgaagtggcaatcacgggtcctacatggg
tctgtcctaggtcctctgcataaatgttgtgttttttttttttttttttt
aaatttttgagtgtttgtgggactcggaaaaagaagaaaggccggaatct
ctgatattttgcctgtacttggggacatttttcctcctactagttgcgga
atgcatatttgatgttgaaatgagtatttgtacctagtcttatggaatat
gctatgcctggtcgtttgaatattacctggaaactgctcattctaaaggg
aatggggaagagcattggatctggggtgagagtaagagcttgtggggcga
gagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_103466248_103467436
seq2: B6Ng01-106M16.b_46_1217 (reverse)

seq1  GGACTAAAGCTCT-CGATTGTCTTCAGACTTACTTGTCCATGTGTGAAGG  49
      ||||||||||||| ||||||||||||||||||| |||||||||| |||||
seq2  GGACTAAAGCTCTCCGATTGTCTTCAGACTTAC-TGTCCATGTG-GAAGG  48

seq1  ATGGTTTATTTAGTTTCCCCGGAGTTCTTCCTATGTGATTGGCAAGAGAG  99
      |  |||   ||||||| |||| |||   |||||||||||  || ||||||
seq2  AATGTT--ATTAGTTT-CCCGAAGT--CTCCTATGTGAT--GC-AGAGAG  90

seq1  AAAGGCAACTTCATGTTATTAGACCACATCAGTGGCAATATTGAACCTGT  149
      ||||||||||||||||||||||||||||||||||   ||| |||||||||
seq2  AAAGGCAACTTCATGTTATTAGACCACATCAGTG--CATA-TGAACCTGT  137

seq1  GCAGAATAATTCATCTTATTCAACCTATTATCATCCTGAATTGAGTTTAT  199
      ||||||||| ||||| || |||||||| |||||| |||||||||||||||
seq2  GCAGAATAA-TCATC-TAATCAACCTA-TATCAT-CTGAATTGAGTTTAT  183

seq1  ATGTATACATGAATATTAAGGCACAGGAAAAAAAAAGTAAGATGAAGGCA  249
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATGTATACATGAATATTAAGGCACAGG-AAAAAAAAGTAAGATGAAGGCA  232

seq1  GGAAGTATGAGCGCTAAACTGTGATTTTGGAAGATAGATAAAGCACTTAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTATGAGCGCTAAACTGTGATTTTGGAAGATAGATAAAGCACTTAT  282

seq1  GTTTTAGTTGATTTGGTTTTTCTTATTCATATTACCTAACTTTTCTTAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGTTGATTTGGTTTTTCTTATTCATATTACCTAACTTTTCTTAAA  332

seq1  ATGACATATAAAAATCATTTTAAAGTTCTGGAAGTAAAAATCCTGCCAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATATAAAAATCATTTTAAAGTTCTGGAAGTAAAAATCCTGCCAAA  382

seq1  CCCAGGAAGTCTAAATTCTGGGGCCACTTGAGGGCACTGTGGCATTGCAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGAAGTCTAAATTCTGGGGCCACTTGAGGGCACTGTGGCATTGCAT  432

seq1  TTGGTCCAGTGACCTATTAAGACTCAACTCAGAAAAAATAATGTAGTTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCCAGTGACCTATTAAGACTCAACTCAGAAAAAATAATGTAGTTTT  482

seq1  TCAAACACCAGGGTGAGCATACACAGGTACTCTGGGGTAATGTCTGGACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACACCAGGGTGAGCATACACAGGTACTCTGGGGTAATGTCTGGACA  532

seq1  CGTGGATGGCATAGCTGTGTGGACATATAAATCAGTTAGTGCCCCACCGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGATGGCATAGCTGTGTGGACATATAAATCAGTTAGTGCCCCACCGA  582

seq1  GGCAACTCCCAGACCAGAGATTGCTTTCCATATCCAGCCTTCATGACATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACTCCCAGACCAGAGATTGCTTTCCATATCCAGCCTTCATGACATG  632

seq1  CTTCAGAGATTTTCTTTACTAGTTGCTCAGGCTGAACTATGATATTATGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAGATTTTCTTTACTAGTTGCTCAGGCTGAACTATGATATTATGA  682

seq1  TTTTCCAATTGCAGCGATAATGGATCATTCCTGGCATTTCCCACTCATTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCAATTGCAGCGATAATGGATCATTCCTGGCATTTCCCACTCATTA  732

seq1  GAATTTGCACCAGCATGATGGATTAATTTAGGGGCATTTTCTGTCCTTGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGCACCAGCATGATGGATTAATTTAGGGGCATTTTCTGTCCTTGG  782

seq1  CATAATCACTGGGAAAGGAATGAGCATAGCTGTTGCCCTGGGTAAGCGAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATCACTGGGAAAGGAATGAGCATAGCTGTTGCCCTGGGTAAGCGAC  832

seq1  AGCACAGGATCTGTCCTGTGCTTAAATGCGCAAAAGGAAAGAATACTTGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGGATCTGTCCTGTGCTTAAATGCGCAAAAGGAAAGAATACTTGG  882

seq1  AGTGGGTGGCACAGGCATGAGAGAGTGGATTCACAAGGCTTAGCTGAGCG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTGGCACAGGCATGAGAGAGTGGATTCACAAGGCTTAGCTGAGCG  932

seq1  AAGGTGAGAGGCTCAGGATGCTGGCTCAGATCACAGTCAACTCCCAGTTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGAGAGGCTCAGGATGCTGGCTCAGATCACAGTCAACTCCCAGTTC  982

seq1  ATGCTGGAATGCAGTGCTAATATTGGAAAATGTTTAAATGCATGCTAATA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGAATGCAGTGCTAATATTGGAAAATGTTTAAATGCATGCTAATA  1032

seq1  GAGCTGACCCTCTCAAGCAGCCACTTTTCATTTTTATTAAAAACTAACTG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGACCCTCTCAAGCAGCCACTTTTCATTTTTATTAAAAACTAACTG  1082

seq1  ACTGCAATAAAAATCACAGAGCATTTTATTCTTCCCGTGTATCATTTATG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAATAAAAATCACAGAGCATTTTATTCTTCCCGTGTATCATTTATG  1132

seq1  TTTAATTTTTACAACCAAAGAAAAATCAAAGACTGAATTC  1189
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTTTACAACCAAAGAAAAATCAAAGACTGAATTC  1172