BAC Information

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BAC

Clone NameB6Ng01-107P16
Chromosome8 (Build37)
Map Location 117,929,282 - 117,930,144
singlet/doubletsinglet
Overlap genenone
Upstream geneClec3a, Wwox
Downstream geneMaf
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107P16.bB6Ng01-107P16.g
ACCDH915288DH915289
length8651,169
definitionDH915288|Mus musculus domesticus DNA, BAC clone: B6Ng01-107P16, 5' end.DH915289|Mus musculus domesticus DNA, BAC clone: B6Ng01-107P16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgaaggtcatggtagtttggctcataagataatcctgtatgac
agtctatctatctatctatctatctatctatctatctatctatctatcta
tctatctgtcatctatctatttatattaggatatatgttttgtccatagt
gcacacattcacacacacacacacacacacacacacacacaaacacacag
atgataggagatgaatgcaaacaaaatacaataacatctatgtataaaat
tatcctaacaaaaacttaaaacatgcaattagaaaacaaatgtaaaatat
aatttatagagcaacttccaccacttctagcatggaaggtcacacatgcc
tagtcagctaggttaaccttttttggattttcttcagtgtaattttctcc
ctgatcaatgaaagccaaaaatcactgttggttaacagagcagcttaaga
caacttcagggtcttcctgtggcctcatcactggcaacatcacagcatca
tcttcagatgaactgccctacagtgaaaggatggcagagtctactaagcc
tctatttcacagccaagtctttgaccacccctgaggcccctacagcatcc
tgagtgagccttttctttataacattttccaaatcagtgtgatttaggtg
accttcacatgaagatggcactggaattcccccacattgtcccatgctct
ggctcgacaaaaggcaggtcttcacaggggttttgggtgcaaaagtccag
agtctttctaagaatgggggagagcctgaggcagccacgggatgctaata
tcagagacagaggtgagggtgcctaatcccaaagaggctgtgcttgtggg
atggggggggagggg
gaattcttcccccacctgatagtcaatcaactgatgtgccaaaaaacggg
tcatcgggccctcggtcccagggccctcaaagatatgggaaccggtttgt
caggacccaggaagcagtcagagaggcgacccaggaagacccacaagggt
ggacctgcgtgccgcctccgacttcctattaatgcctcaaatgagtattc
agccggtgccagtggagcctataccatccttgcccccgggaaccatgggc
cttattctcggccggggttcactcaccttgcagggcttagtagtccaccc
tggagttatggattgtcaacattcccctgaaatacaggtcctgtgctcaa
gccctaaaggcgttttttctattagtaaaggagataggatagctcagctg
ctgctcctccctgataataccagggaaaaatctgcaggacctgagataaa
gaaaatgggctcctcaggaaatgattctgcctatttggttgtatctttaa
atgatagacctaagctccgccttaagattaatggaaaagagtttgaaggc
atccttgataccggagcagataaaagtataatctctacacattggtggcc
caaagcatggcccaccacagagtcatctcattcattacagggcctaggat
atcaatcatgtcccactataagctccattgccttgacgtgggaatcctct
gaaggacagcaagggaaattcataccttatgtgctcccactcccggttaa
cctctggggaagggatattatgcagcatttgggccttattttgtccaatg
aaaacgccccatcgggagggtattcaactaaagcaaaaaatatcatggca
aagatgggttataaagaggaaaagggttaggacatcaagaacagggaagg
atagagcccatctcactaatggaaccaagacagacagggtctgggttttc
cttagtgtcattgggcagcacgactcataccatgaaacagggaccagtgt
ggttcctcaatgcactatcctctgaaaactagagcttgtgattcactgta
gagaacataaactagcctattgagccatctactcacctggatccttcatt
tttgtatttagaaagtcgaagtgaactggctcatgacctcaaaccattat
tggacaaaattaccttaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_117929282_117930144
seq2: B6Ng01-107P16.b_44_908 (reverse)

seq1  CCCCT--CCCCCCATCCCACAAGCACAGCCTCTTTGGGATTAGGCACCCT  48
      |||||  |||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCCCCCCCATCCCACAAGCACAGCCTCTTTGGGATTAGGCACCCT  50

seq1  CACCTCTGTCTCTGATATTAGCATCCCGTGGCTGCCTCAGGCTCTCCCCC  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCTGTCTCTGATATTAGCATCCCGTGGCTGCCTCAGGCTCTCCCCC  100

seq1  ATTCTTAGAAAGACTCTGGACTTTTGCACCCAAAACCCCTGTGAAGACCT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTAGAAAGACTCTGGACTTTTGCACCCAAAACCCCTGTGAAGACCT  150

seq1  GCCTTTTGTCGAGCCAGAGCATGGGACAATGTGGGGGAATTCCAGTGCCA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTTGTCGAGCCAGAGCATGGGACAATGTGGGGGAATTCCAGTGCCA  200

seq1  TCTTCATGTGAAGGTCACCTAAATCACACTGATTTGGAAAATGTTATAAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATGTGAAGGTCACCTAAATCACACTGATTTGGAAAATGTTATAAA  250

seq1  GAAAAGGCTCACTCAGGATGCTGTAGGGGCCTCAGGGGTGGTCAAAGACT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGCTCACTCAGGATGCTGTAGGGGCCTCAGGGGTGGTCAAAGACT  300

seq1  TGGCTGTGAAATAGAGGCTTAGTAGACTCTGCCATCCTTTCACTGTAGGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTGAAATAGAGGCTTAGTAGACTCTGCCATCCTTTCACTGTAGGG  350

seq1  CAGTTCATCTGAAGATGATGCTGTGATGTTGCCAGTGATGAGGCCACAGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCATCTGAAGATGATGCTGTGATGTTGCCAGTGATGAGGCCACAGG  400

seq1  AAGACCCTGAAGTTGTCTTAAGCTGCTCTGTTAACCAACAGTGATTTTTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCCTGAAGTTGTCTTAAGCTGCTCTGTTAACCAACAGTGATTTTTG  450

seq1  GCTTTCATTGATCAGGGAGAAAATTACACTGAAGAAAATCCAAAAAAGGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCATTGATCAGGGAGAAAATTACACTGAAGAAAATCCAAAAAAGGT  500

seq1  TAACCTAGCTGACTAGGCATGTGTGACCTTCCATGCTAGAAGTGGTGGAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTAGCTGACTAGGCATGTGTGACCTTCCATGCTAGAAGTGGTGGAA  550

seq1  GTTGCTCTATAAATTATATTTTACATTTGTTTTCTAATTGCATGTTTTAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTCTATAAATTATATTTTACATTTGTTTTCTAATTGCATGTTTTAA  600

seq1  GTTTTTGTTAGGATAATTTTATACATAGATGTTATTGTATTTTGTTTGCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGTTAGGATAATTTTATACATAGATGTTATTGTATTTTGTTTGCA  650

seq1  TTCATCTCCTATCATCTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTCCTATCATCTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTG  700

seq1  TGTGTGAATGTGTGCACTATGGACAAAACATATATCCTAATATAAATAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGAATGTGTGCACTATGGACAAAACATATATCCTAATATAAATAGA  750

seq1  TAGATGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG  800

seq1  ATAGATAGATAGACTGTCATACAGGATTATCTTATGAGCCAAACTACCAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAGATAGACTGTCATACAGGATTATCTTATGAGCCAAACTACCAT  850

seq1  GACCTTCATGAATTC  863
      |||||||||||||||
seq2  GACCTTCATGAATTC  865