BAC Information

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BAC

Clone NameB6Ng01-108D22
Chromosome8 (Build37)
Map Location 85,068,887 - 85,196,894
singlet/doubletdoublet
Overlap geneEG666564
Upstream geneInpp4b, LOC671182, Il15
Downstream geneLOC675800, EG666289, Zfp330, Rnf150, LOC100039688, Tbc1d9, Ucp1, Elmod2, 4933434I20Rik, Clgn, Scoc, LOC546077, LOC675854, Olfr370, Ndufb7, Gpsn2, Dnajb1, Gipc1, Ptger1, Pkn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108D22.bB6Ng01-108D22.g
ACCDH915479DH915480
length1,0221,064
definitionDH915479|Mus musculus domesticus DNA, BAC clone: B6Ng01-108D22, 5' end.DH915480|Mus musculus domesticus DNA, BAC clone: B6Ng01-108D22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,068,887 - 85,069,901)(85,195,814 - 85,196,894)
sequence
gaattctttcaactacttaaaatgttaaaatattcatacatgggccacat
gaaaacaagatgtttggcttcatgggtgttgtgcacagactcatgaactg
gatcatccagttgaaatttgtagtttataaaatccctgagaagggatagg
aggagttctgaagacagagttaatcaagaactgcaaatgaagtattgtct
tttggctaaataagctatctcatgaataagatattattcaaatgcatgtt
tgtacaagtgaaattagtgaaataagaagtgataaaatctttagtagatt
taataaggtaataaaagttcattaaacaaaatttattccagcggtttctg
aagcattgtttgacactatgtttgttcattgatagcataataattctaaa
ctttagaacaagatgagtccttcaaaggggaaaggaataaagggtgggga
gaaataaaggagggcatcaggtatgaacacacaagctgacagagtaaaag
aacattagctgaaggtagaaatgtgctactgaataaaaataggcatattt
actgatggaataaaacaaagaccagaaggaattccacacatattttatca
ctgggtagttaccaagaatgccaagaatatcacgaagaaatatttcttca
tcagaaatactgagaaaactgatattgtacaaagaacctaattagacccc
tttctgtttcatcacaaaaaattaattcagatggatcaaaattttaacct
gaaagcaggaacctactggaggacatgtccctgtggtatagcagatcatc
ttttgggcatgtgcccaggagcagtatagatgggtcttcaagtagaacta
tttccaattttctgaggaactgccagattggtttgtagagtggttgtatc
attttacactcccttctgcaagagaggagtgctttctacatctttgctaa
catctgctatcacttgattttttatcttagacacaggacacttgttctac
tatgttcatagcagccttgttc
gaattctatggtgttttgttactgggtactttcccaaatacctgtgggga
aagaagtttatttaaagaataatgaaaggaacagaattaagattaagaat
gggaaccaagaaatagaataaaaatagctgagagttgtaactaaaaaaaa
aattaagggaaaattaatctcccaaatatataaatacctgacagacagag
agaacaggtaggctggatttgctgacaaagagccaagatcaaacaattga
tttaggagaaaactattctgataataagtccttaaggagaaactggcaag
ctccaacttagtggtacggaagacctgatatcacgaggagtggatgactc
agagcttacctttacggcccctttctactaaggaagaagcttccagaaca
ggagggctgctttgaagttaacgtctgaaaagaaacacacagcccatctg
cccttactttctgctagcactaagtgcgacaattcatacatatgttcaca
attcctgagaaatgaaatgccccatttaaggagatgttatgaactttcaa
gtagtagaacataaaattacaagtgcacacttgaaaactgtatatctaaa
ttcataatcacatatttttgataaaatataagcaatgtttttcaacttaa
taaggggaattcttctttaaatagtataccaaggatagtacacaaagtat
ttactgaaataaagcacttgaaaaatcagaggaattaatccagaaatata
tctcatctccaagaactagggtaaaccacgggttactgtttatctatcta
tctatctatctatctatctatctatctatctatctatctatctatctatc
tatctatctatcatctgtctgtcttagttagggtttctattcctgcacaa
catcacgaccaagaagcaagttggggaggaaagggtttattcagcttaca
cttccacattgctgttcatcaccaggaagtcagactggactcaagcagtc
agaagcagagtcgatgcaaaggcatggaggatgttctactgcttgctttc
cttgcttgctcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_85068887_85069901
seq2: B6Ng01-108D22.b_41_1053

seq1  GAATTCTTTCAACTACTTAAAATGTTAAAATATTCATACATGGGCCACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAACTACTTAAAATGTTAAAATATTCATACATGGGCCACAT  50

seq1  GAAAACAAGATGTTTGGCTTCATGGGTGTTGTGCACAGACTCATGAACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAAGATGTTTGGCTTCATGGGTGTTGTGCACAGACTCATGAACTG  100

seq1  GATCATCCAGTTGAAATTTGTAGTTTATAAAATCCCTGAGAAGGGATAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATCCAGTTGAAATTTGTAGTTTATAAAATCCCTGAGAAGGGATAGG  150

seq1  AGGAGTTCTGAAGACAGAGTTAATCAAGAACTGCAAATGAAGTATTGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTCTGAAGACAGAGTTAATCAAGAACTGCAAATGAAGTATTGTCT  200

seq1  TTTGGCTAAATAAGCTATCTCATGAATAAGATATTATTCAAATGCATGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTAAATAAGCTATCTCATGAATAAGATATTATTCAAATGCATGTT  250

seq1  TGTACAAGTGAAATTAGTGAAATAAGAAGTGATAAAATCTTTAGTAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAAGTGAAATTAGTGAAATAAGAAGTGATAAAATCTTTAGTAGATT  300

seq1  TAATAAGGTAATAAAAGTTCATTAAACAAAATTTATTCCAGCGGTTTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGGTAATAAAAGTTCATTAAACAAAATTTATTCCAGCGGTTTCTG  350

seq1  AAGCATTGTTTGACACTATGTTTGTTCATTGATAGCATAATAATTCTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTGTTTGACACTATGTTTGTTCATTGATAGCATAATAATTCTAAA  400

seq1  CTTTAGAACAAGATGAGTCCTTCAAAGGGGAAAGGAATAAAGGGTGGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGAACAAGATGAGTCCTTCAAAGGGGAAAGGAATAAAGGGTGGGGA  450

seq1  GAAATAAAGGAGGGCATCAGGTATGAACACACAAGCTGACAGAGTAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAAGGAGGGCATCAGGTATGAACACACAAGCTGACAGAGTAAAAG  500

seq1  AACATTAGCTGAAGGTAGAAATGTGCTACTGAATAAAAATAGGCATATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTAGCTGAAGGTAGAAATGTGCTACTGAATAAAAATAGGCATATTT  550

seq1  ACTGATGGAATAAAACAAAGACCAGAAGGAATTCCACACATATTTTATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATGGAATAAAACAAAGACCAGAAGGAATTCCACACATATTTTATCA  600

seq1  CTGGGTAGTTACCAAGAATGCCAAGAATATCACGAAGAAATATTTCTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTAGTTACCAAGAATGCCAAGAATATCACGAAGAAATATTTCTTCA  650

seq1  TCAGAAATACTGAGAAAACTGATATTGTACAAAGAACCTAATTAGACCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATACTGAGAAAACTGATATTGTACAAAGAACCTAATTAGACCCC  700

seq1  TTTCTGTTTCATCACAAAAAATTAATTCAGATGGATCAAAATTTTAACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTTCATCACAAAAAATTAATTCAGATGGATCAAAATTTTAACCT  750

seq1  GAAAGCAGGAACCTACTGGAGGACATGTCCCTGTGGTATAGCAGATCATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCAGGAACCTACTGGAGGACATGTCCCTGTGGTATAGCAGATCATC  800

seq1  TTTTGGGCATGTGCCCAGGAGCAGTATAGATGGGTCTTCAAGTAGAACTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGGCATGTGCCCAGGAGCAGTATAGATGGGTCTTCAAGTAGAACTA  850

seq1  TTTCCAATTTTCTGAGGAACTGCCAGATTGGTTTGTAGAGTGGTTGTATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAATTTTCTGAGGAACTGCCAGATTGGTTTGTAGAGTGGTTGTATC  900

seq1  ATTTTACACTCCCTCCTGCAAGAGAGGAGTGCTTTCTACATCTTTGCTAA  950
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATTTTACACTCCCTTCTGCAAGAGAGGAGTGCTTTCTACATCTTTGCTAA  950

seq1  CATCTGCTATCACTTGAATTTTTTATCTTAGACACAAGGACACTTGTTCT  1000
      |||||||||||||||| |||||||||||||||||| ||||||||||||||
seq2  CATCTGCTATCACTTG-ATTTTTTATCTTAGACAC-AGGACACTTGTTCT  998

seq1  ACTATGTTCATAGCA  1015
      |||||||||||||||
seq2  ACTATGTTCATAGCA  1013

seq1: chr8_85195814_85196894
seq2: B6Ng01-108D22.g_64_1127 (reverse)

seq1  GCTGAGCAAGCCAGGGGAAGCAAGCCAGTAAGGAACATCCCTCCATGGCC  50
      |||||||||| || || ||||||| |||||  |||||| ||||||| |||
seq2  GCTGAGCAAG-CAAGGAAAGCAAG-CAGTA--GAACAT-CCTCCAT-GCC  44

seq1  TCTGCATCGGCTCCTGCTTTCTGACCTGCTTGAGTTCCAGTCCTGACTTC  100
      | ||||||| || |||| |||||| ||||||||| |||||| ||||||||
seq2  TTTGCATCGACT-CTGC-TTCTGA-CTGCTTGAG-TCCAGT-CTGACTTC  89

seq1  CTTGGTGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTTCCT  150
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-TGGTGATGAACAGCAATGTGGAAGTGTAAGCTGAATAAACCCTTTCCT  138

seq1  CCCCAACTTGCTTCTTGGTCGTGATGTTTGTGCAGGAATAGAAACCCTAA  200
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCCCAACTTGCTTCTTGGTCGTGATG-TTGTGCAGGAATAGAAACCCTAA  187

seq1  CTAAGACAGACAGATGATAGATAGATAGATAGATAGATAGATAGATAGAT  250
      |||||||||||||||    |||||||||||||||||||||||||||||||
seq2  CTAAGACAGACAGAT----GATAGATAGATAGATAGATAGATAGATAGAT  233

seq1  AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAAACAGTAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAAACAGTAAC  283

seq1  CCGTGGTTTACCCTAGTTCTTGGAGATGAGATATATTTCTGGATTAATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGGTTTACCCTAGTTCTTGGAGATGAGATATATTTCTGGATTAATTC  333

seq1  CTCTGATTTTTCAAGTGCTTTATTTCAGTAAATACTTTGTGTACTATCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATTTTTCAAGTGCTTTATTTCAGTAAATACTTTGTGTACTATCCT  383

seq1  TGGTATACTATTTAAAGAAGAATTCCCCTTATTAAGTTGAAAAACATTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATACTATTTAAAGAAGAATTCCCCTTATTAAGTTGAAAAACATTGC  433

seq1  TTATATTTTATCAAAAATATGTGATTATGAATTTAGATATACAGTTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTTATCAAAAATATGTGATTATGAATTTAGATATACAGTTTTCA  483

seq1  AGTGTGCACTTGTAATTTTATGTTCTACTACTTGAAAGTTCATAACATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGCACTTGTAATTTTATGTTCTACTACTTGAAAGTTCATAACATCT  533

seq1  CCTTAAATGGGGCATTTCATTTCTCAGGAATTGTGAACATATGTATGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAATGGGGCATTTCATTTCTCAGGAATTGTGAACATATGTATGAAT  583

seq1  TGTCGCACTTAGTGCTAGCAGAAAGTAAGGGCAGATGGGCTGTGTGTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGCACTTAGTGCTAGCAGAAAGTAAGGGCAGATGGGCTGTGTGTTTC  633

seq1  TTTTCAGACGTTAACTTCAAAGCAGCCCTCCTGTTCTGGAAGCTTCTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGACGTTAACTTCAAAGCAGCCCTCCTGTTCTGGAAGCTTCTTCC  683

seq1  TTAGTAGAAAGGGGCCGTAAAGGTAAGCTCTGAGTCATCCACTCCTCGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAGAAAGGGGCCGTAAAGGTAAGCTCTGAGTCATCCACTCCTCGTG  733

seq1  ATATCAGGTCTTCCGTACCACTAAGTTGGAGCTTGCCAGTTTCTCCTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAGGTCTTCCGTACCACTAAGTTGGAGCTTGCCAGTTTCTCCTTAA  783

seq1  GGACTTATTATCAGAATAGTTTTCTCCTAAATCAATTGTTTGATCTTGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTATTATCAGAATAGTTTTCTCCTAAATCAATTGTTTGATCTTGGC  833

seq1  TCTTTGTCAGCAAATCCAGCCTACCTGTTCTCTCTGTCTGTCAGGTATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTCAGCAAATCCAGCCTACCTGTTCTCTCTGTCTGTCAGGTATTT  883

seq1  ATATATTTGGGAGATTAATTTTCCCTTAATTTTTTTTTTAGTTACAACTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTGGGAGATTAATTTTCCCTTAATTTTTTTTTTAGTTACAACTC  933

seq1  TCAGCTATTTTTATTCTATTTCTTGGTTCCCATTCTTAATCTTAATTCTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTATTTTTATTCTATTTCTTGGTTCCCATTCTTAATCTTAATTCTG  983

seq1  TTCCTTTCATTATTCTTTAAATAAACTTCTTTCCCCACAGGTATTTGGGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCATTATTCTTTAAATAAACTTCTTTCCCCACAGGTATTTGGGA  1033

seq1  AAGTACCCAGTAACAAAACACCATAGAATTC  1081
      |||||||||||||||||||||||||||||||
seq2  AAGTACCCAGTAACAAAACACCATAGAATTC  1064