BAC Information

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BAC

Clone NameB6Ng01-108H10
Chromosome8 (Build37)
Map Location 25,296,866 - 25,414,731
singlet/doubletdoublet
Overlap genenone
Upstream geneAgpat6, Gins4, Golga7, Sfrp1, LOC100040931, Zmat4
Downstream gene1810011O10Rik, Indol1, Indo, Adam18, Adam3, Adam5, Adam32, Adam9, Tm2d2, Htra4, Plekha2, LOC100042390, Tacc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108H10.bB6Ng01-108H10.g
ACCDH915642DH915643
length8431,135
definitionDH915642|Mus musculus domesticus DNA, BAC clone: B6Ng01-108H10, 5' end.DH915643|Mus musculus domesticus DNA, BAC clone: B6Ng01-108H10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,296,866 - 25,297,705)(25,413,585 - 25,414,731)
sequence
gaattctttcttcaacattctcctgagggccagctgagacttggagatga
tgccctctaacctaaagggaactgcagcctctgacagaagatccatatgg
gatgaccgatcaattggatcaattccttgcatccaaatctaatgttcata
ctaatgtcaacactactattgtcttctttggtgaagaaagggagacagta
aggaaggatgcagtgctgtttggggcagatagcacccatctgcccatctg
cactgtgtgtaatgatagcaaatgaaacactccccaggtacaaccagaac
tggaagtaacactgggacccactgaggccacatgtgggttcatagcaact
tggtcctaagagggactagggaatcagcactccaggaccaggacatcaat
aaaaccttcagtgtacagaagagaaagaagcaagacctgcagagttgcta
ggaggctgatggactggatggaaaggcacctggcattagatgcagtagag
ccttccagacaaaggatgctaaaattacatgctgtaactaacagttgtcc
aggcataggggagagttatagaaagttgagggtgaattgggagggaagag
aaattacattactggctaacagggctgtatattcttctctgttctagcta
gaaaaaagaagaataaatgtcttctgttatctaaaaactttaattgcagg
gttaacttttaaagtttgggtgttctatgtgtagtttcctttacacacat
agtttacaaagaatgttcccctcttcaaggtcattgataatgtgtgaaga
ctcttgctaaaattgtatagttttttctaaatttttagctctc
gaattcttaaaagaagaaataaaaatggccaaaagtaatcttcgagtgtg
cagagaaatgcaaattaaaactactttgggatttcctttcaccccattga
taatgggagaatggttaacattggaaaagcaactgatgagaaatgtttgc
aaagataggggaggggatctcttttgactcacaggaaaggaaagatgtgg
agagactaatatgataatgttttatcaaggactatgtggacagcttatat
aatgtgactggggtcatcctcacaccagggagaccttgtgcctgttcaga
aagactgagccaacatcaaaccccttgattgccaggcttgagctatatga
tctgtgctgatacctcttgcttgatagcttcaatctctgctgttcccttt
tgggagagtcaaggcgttctgtgctttaaagaaagaatagcaggaaactg
ttacatgcctggctacagaattatcagaaagcacagactctgaactgacc
tgcttacctaaaaatgctgaacaaatgaaggagtaagtcatgtgacaaac
aaggccccctgtgacagccacacagcactccagtgttaattttgcttgca
gaacaccaaagtctttaaagcaaagaattgtttaaattggtagactgtct
tctgattttccaattatagaatggttcacgtgagcacctatcaaaattaa
agaaacaggtcatgaatccaagtttgtagccatgctaatttcatgtatgt
cttctcaccagtcatactttattaaatatttttatgacacacagagtgct
aagtttattaaggcacatgcttgttatgttgctccatcactcttggcctc
cctctccatctccatctgtcatacccttccactcccattcatcctgtttc
tgtttccatggataccttccattgtcctcacctccttcctcagctgctct
ttttgtccctctgttcacccatctagtacacatgtacacacatgcattca
tcaattcatcaactctctcccctctctcttctctgtctattttctgatga
tagcatccttcctgggtgaaatgaatctcagagtagtttcatctcatcca
tcttacttctccttttggacagaaagcagccctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_25296866_25297705
seq2: B6Ng01-108H10.b_43_885

seq1  GAATTCTTTCTTCAACATTCTCCTGAGGGCCAGCTGAGACTTGGAGATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTCAACATTCTCCTGAGGGCCAGCTGAGACTTGGAGATGA  50

seq1  TGCCCTCTAACCTAAAGGGAACTGCAGCCTCTGACAGAAGATCCATATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCTAACCTAAAGGGAACTGCAGCCTCTGACAGAAGATCCATATGG  100

seq1  GATGACCGATCAATTGGATCAATTCCTTGCATCCAAATCTAATGTTCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACCGATCAATTGGATCAATTCCTTGCATCCAAATCTAATGTTCATA  150

seq1  CTAATGTCAACACTACTATTGTCTTCTTTGGTGAAGAAAGGGAGACAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGTCAACACTACTATTGTCTTCTTTGGTGAAGAAAGGGAGACAGTA  200

seq1  AGGAAGGATGCAGTGCTGTTTGGGGCAGATAGCACCCATCTGCCCATCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGATGCAGTGCTGTTTGGGGCAGATAGCACCCATCTGCCCATCTG  250

seq1  CACTGTGTGTAATGATAGCAAATGAAACACTCCCCAGGTACAACCAGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGTGTAATGATAGCAAATGAAACACTCCCCAGGTACAACCAGAAC  300

seq1  TGGAAGTAACACTGGGACCCACTGAGGCCACATGTGGGTTCATAGCAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTAACACTGGGACCCACTGAGGCCACATGTGGGTTCATAGCAACT  350

seq1  TGGTCCTAAGAGGGACTAGGGAATCAGCACTCCAGGACCAGGACATCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCTAAGAGGGACTAGGGAATCAGCACTCCAGGACCAGGACATCAAT  400

seq1  AAAACCTTCAGTGTACAGAAGAGAAAGAAGCAAGACCTGCAGAGTTGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTTCAGTGTACAGAAGAGAAAGAAGCAAGACCTGCAGAGTTGCTA  450

seq1  GGAGGCTGATGGACTGGATGGAAAGGCACCTGGCATTAGATGCAGTAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCTGATGGACTGGATGGAAAGGCACCTGGCATTAGATGCAGTAGAG  500

seq1  CCTTCCAGACAAAGGATGCTAAAATTACATGCTGTAACTAACAGTTGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCAGACAAAGGATGCTAAAATTACATGCTGTAACTAACAGTTGTCC  550

seq1  AGGCATAGGGGAGAGTTATAGAAAGTTGAGGGTGAATTGGGAGGGAAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATAGGGGAGAGTTATAGAAAGTTGAGGGTGAATTGGGAGGGAAGAG  600

seq1  AAATTACATTACTGGCTAACAGGGCTGTATATTCTTCTCTGTTCTAGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACATTACTGGCTAACAGGGCTGTATATTCTTCTCTGTTCTAGCTA  650

seq1  GAAAAAAGAAGAATAAATGTCTTCTGTTATCT-AAAACTTTAATTGCAGG  699
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GAAAAAAGAAGAATAAATGTCTTCTGTTATCTAAAAACTTTAATTGCAGG  700

seq1  GTTAACTTTTAAAGTTTGGGTGTTCTATGTGTAGTTTCC-TTACACACAT  748
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GTTAACTTTTAAAGTTTGGGTGTTCTATGTGTAGTTTCCTTTACACACAT  750

seq1  AGTTTACAAAGAATGTTCCCCATCTTCAA-GTCATTGATAATGTGTGAAG  797
      ||||||||||||||||||||| ||||||| ||||||||||||||||||||
seq2  AGTTTACAAAGAATGTTCCCC-TCTTCAAGGTCATTGATAATGTGTGAAG  799

seq1  ACTCTTGCTAAAATTGTATAG-TTTTTCTAATTCTTGAGCTCTC  840
      ||||||||||||||||||||| ||||||||| | || |||||||
seq2  ACTCTTGCTAAAATTGTATAGTTTTTTCTAAATTTTTAGCTCTC  843

seq1: chr8_25413585_25414731
seq2: B6Ng01-108H10.g_68_1202 (reverse)

seq1  TCAGGGCTTGCTGTCCTGTTCAAAA-GAGAAGT-AGATGGGATGAGATGG  48
      ||||||| |||| | |||| ||||| ||||||| |||| |||||||||| 
seq2  TCAGGGC-TGCT-TTCTGTCCAAAAGGAGAAGTAAGAT-GGATGAGATGA  47

seq1  AACTACTCTGAGATTCCATCTCAACCCAGGAAGGATAGCTATCATCAAGA  98
      ||||||||||||||| ||| || ||||||||||||| ||||||||| |||
seq2  AACTACTCTGAGATT-CATTTC-ACCCAGGAAGGAT-GCTATCATC-AGA  93

seq1  AAATAGACAGGAGGAGGAGGAGAGGGGGAGGAG-GAGTTGATGAATTGAT  147
      |||||||||       ||| |||| | | |||| ||||||||||||||||
seq2  AAATAGACA-------GAGAAGAGAGAGGGGAGAGAGTTGATGAATTGAT  136

seq1  GAATGCATGTGTGTACATGTGTACTAGATGGGTGAACAGAGGGGACAAAA  197
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAATGCATGTGTGTACATGTGTACTAGATGGGTGAACAGA-GGGACAAAA  185

seq1  AGAGCAGCTGAGGAAGGAGGTGAGGACAATGGAAGGTATCCATGGAAACA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGCTGAGGAAGGAGGTGAGGACAATGGAAGGTATCCATGGAAACA  235

seq1  GAAACAGGATGAATGGGAGTGGAAGGGTATGACAGATGGAGATGGAGAGG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGGATGAATGGGAGTGGAAGGGTATGACAGATGGAGATGGAGAGG  285

seq1  GAGGCCAAGAGTGATGGAGCAACATAACAAGCATGTGCCTTAATAAACTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCAAGAGTGATGGAGCAACATAACAAGCATGTGCCTTAATAAACTT  335

seq1  AGCACTCTGTGTGTCATAAAAATATTTAATAAAGTATGACTGGTGAGAAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCTGTGTGTCATAAAAATATTTAATAAAGTATGACTGGTGAGAAG  385

seq1  ACATACATGAAATTAGCATGGCTACAAACTTGGATTCATGACCTGTTTCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATGAAATTAGCATGGCTACAAACTTGGATTCATGACCTGTTTCT  435

seq1  TTAATTTTGATAGGTGCTCACGTGAACCATTCTATAATTGGAAAATCAGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTGATAGGTGCTCACGTGAACCATTCTATAATTGGAAAATCAGA  485

seq1  AGACAGTCTACCAATTTAAACAATTCTTTGCTTTAAAGACTTTGGTGTTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGTCTACCAATTTAAACAATTCTTTGCTTTAAAGACTTTGGTGTTC  535

seq1  TGCAAGCAAAATTAACACTGGAGTGCTGTGTGGCTGTCACAGGGGGCCTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGCAAAATTAACACTGGAGTGCTGTGTGGCTGTCACAGGGGGCCTT  585

seq1  GTTTGTCACATGACTTACTCCTTCATTTGTTCAGCATTTTTAGGTAAGCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTCACATGACTTACTCCTTCATTTGTTCAGCATTTTTAGGTAAGCA  635

seq1  GGTCAGTTCAGAGTCTGTGCTTTCTGATAATTCTGTAGCCAGGCATGTAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGTTCAGAGTCTGTGCTTTCTGATAATTCTGTAGCCAGGCATGTAA  685

seq1  CAGTTTCCTGCTATTCTTTCTTTAAAGCACAGAACGCCTTGACTCTCCCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCCTGCTATTCTTTCTTTAAAGCACAGAACGCCTTGACTCTCCCA  735

seq1  AAAGGGAACAGCAGAGATTGAAGCTATCAAGCAAGAGGTATCAGCACAGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAACAGCAGAGATTGAAGCTATCAAGCAAGAGGTATCAGCACAGA  785

seq1  TCATATAGCTCAAGCCTGGCAATCAAGGGGTTTGATGTTGGCTCAGTCTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAGCTCAAGCCTGGCAATCAAGGGGTTTGATGTTGGCTCAGTCTT  835

seq1  TCTGAACAGGCACAAGGTCTCCCTGGTGTGAGGATGACCCCAGTCACATT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAACAGGCACAAGGTCTCCCTGGTGTGAGGATGACCCCAGTCACATT  885

seq1  ATATAAGCTGTCCACATAGTCCTTGATAAAACATTATCATATTAGTCTCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGCTGTCCACATAGTCCTTGATAAAACATTATCATATTAGTCTCT  935

seq1  CCACATCTTTCCTTTCCTGTGAGTCAAAAGAGATCCCCTCCCCTATCTTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATCTTTCCTTTCCTGTGAGTCAAAAGAGATCCCCTCCCCTATCTTT  985

seq1  GCAAACATTTCTCATCAGTTGCTTTTCCAATGTTAACCATTCTCCCATTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACATTTCTCATCAGTTGCTTTTCCAATGTTAACCATTCTCCCATTA  1035

seq1  TCAATGGGGTGAAAGGAAATCCCAAAGTAGTTTTAATTTGCATTTCTCTG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGGGTGAAAGGAAATCCCAAAGTAGTTTTAATTTGCATTTCTCTG  1085

seq1  CACACTCGAAGATTACTTTTGGCCATTTTTATTTCTTCTTTTAAGAATTC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTCGAAGATTACTTTTGGCCATTTTTATTTCTTCTTTTAAGAATTC  1135