BAC Information

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BAC

Clone NameB6Ng01-109E09
Chromosome8 (Build37)
Map Location 36,701,911 - 36,702,313
singlet/doubletsinglet
Overlap geneMfhas1
Upstream geneDusp4, LOC675578, Tnks, LOC666792, LOC666797, LOC666804, Ppp1r3b, Thex1
Downstream geneLOC100041572, Gm501, Cldn23, LOC671641, D8Ertd82e, Lonrf1, EG544878, 6430573F11Rik, Dlc1, LOC100042892
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109E09.g
ACCDH916225
length440
definitionDH916225|Mus musculus domesticus DNA, BAC clone: B6Ng01-109E09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
agttttctcaaattaaaaaaaaaagtgccttggttgggctgcacacagca
gaggggaagcccctattgctttctcgtttctgctttcctaaggacatgaa
ccccatcagagcagcgtgtactcttactacctcacttagctttacttgct
ttgtggcaggccatccacacacagtcatattgtaggctagggctctgagg
ggcacacaggatagaagcagagtacgcttctaacctgagaagcagaagtg
cttttgaaaaagacatttgatcaaaggggaaaaattaaaatatgctctct
ctagaatactacccaacctcagactttattgtaaagctacagaaatgaaa
gtgactagccatatgttcaaattatagagaccaaacagaattaagaaata
tacaaacacaagaatggttggttggttgatttttgagaaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_36701911_36702313
seq2: B6Ng01-109E09.g_35_439 (reverse)

seq1  TTCTCAAAAATCAACCAACCAACCATTCTTGTGTTTGTATATTTCTTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAAAAATCAACCAACCAACCATTCTTGTGTTTGTATATTTCTTAAT  50

seq1  TCTGTTTGGTCTCTTTGATTTGAACATATGGCTAGTCACTTTCATTTCTG  100
      |||||||||||||| | |||||||||||||||||||||||||||||||||
seq2  TCTGTTTGGTCTCTATAATTTGAACATATGGCTAGTCACTTTCATTTCTG  100

seq1  TAGCTTTACAATAAAGTCTGAGGTTGGGTAGTATTCTAGAGAGAGCATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTTACAATAAAGTCTGAGGTTGGGTAGTATTCTAGAGAGAGCATAT  150

seq1  TTTAATTTTTCCCCTTTGATCAAATGTCTTTTTCAAAAGCACTTCTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTTTCCCCTTTGATCAAATGTCTTTTTCAAAAGCACTTCTGCTT  200

seq1  CTCAGGTTAGAAGCGTACTCTGCTTCTATCCTGTGTGCCCCTCAGAGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTTAGAAGCGTACTCTGCTTCTATCCTGTGTGCCCCTCAGAGCCC  250

seq1  TAGCCTCCAATATGACTGTGTGTGGATGGCCTGCCACAAAGCAAGTAAAG  300
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTACAATATGACTGTGTGTGGATGGCCTGCCACAAAGCAAGTAAAG  300

seq1  CTAAGTGAGGTAGTAAGAGTACACGCTGCTCTGATGGGGTTCATGTCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTGAGGTAGTAAGAGTACACGCTGCTCTGATGGGGTTCATGTCCTT  350

seq1  AGGAAAGCAGAAACGAGAAAGC--TTCCAGCTTCCCCTCTGCTGTGTGCA  398
      ||||||||||||||||||||||  |    |||||||||||||||||||||
seq2  AGGAAAGCAGAAACGAGAAAGCAATAGGGGCTTCCCCTCTGCTGTGTGCA  400

seq1  GCCCA  403
      |||||
seq2  GCCCA  405