BAC Information

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BAC

Clone NameB6Ng01-110L10
Chromosome8 (Build37)
Map Location 107,338,015 - 107,489,938
singlet/doubletdoublet
Overlap geneBC015286, Matr3-ps2, Ces2, LOC667754, LOC667760, Ces5, 2310038E17Rik, 2210023G05Rik
Upstream geneLOC100041397, LOC667656, Cdh5, Bean, Tk2, Cklf, Cmtm2a, Cmtm2b, Cmtm3, Cmtm4, Dync1li2, Ccdc79, Appbp1, Car7, LOC628007, 4833426J09Rik, Cdh16, Rrad, 1110019N10Rik, EG637550, LOC382052, LOC100041473, Ces6, LOC628050, 4932416K20Rik
Downstream geneLOC436058, EG436059, Es31, EG13909, LOC667774, BC026374, LOC100042408, Cbfb, D230025D16Rik, C76566, Tradd, Fbxl8, Hsf4, Nol3, 4931428F04Rik, Exoc3l, E2f4, Elmo3, Lrrc29, Hspc171, Fhod1, Slc9a5, Plekhg4, Kctd19, Lrrc36, 2700055K07Rik, Zdhhc1, LOC667837, Hsd11b2, Atp6v0d1, Agrp, EG667846, 2310066E14Rik, LOC546100, Ctcf, EG546101, D130029J02Rik, Acd, Pard6a, E130303B06Rik, 4933405L10Rik, Gfod2, Ranbp10, Tsnaxip1, Cenpt, LOC100041617, Thap11, Nutf2, Edc4, Nrn1l, Pskh1, Ctrl, Psmb10, Lcat, Slc12a4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110L10.bB6Ng01-110L10.g
ACCDH917260DH917261
length8421,149
definitionDH917260|Mus musculus domesticus DNA, BAC clone: B6Ng01-110L10, 5' end.DH917261|Mus musculus domesticus DNA, BAC clone: B6Ng01-110L10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,489,097 - 107,489,938)(107,338,015 - 107,339,186)
sequence
gaattccacaacatgtagaccaggttctcctagacacacagctctcccaa
ccttgctaatagctagaatctcctcttcactcttgcctctcagacagcgc
accagggcctctgaatccatggcctcacaaccagagagcttggccaccgt
ctgcaaagggaacaagcagggagaagagttcttagttctaagtcaatgat
ttttttgcatctaattcccacaccatagtgtgtgttgtgtggattggaac
aagtataaattgttcccattttcctattgctcaaaggtgacatccagaaa
gcagaactctttctgcatacctgctctttttgtttagggtagtattgagt
attgttttctccatcaacttttgtctgtttcatatatgagggaaagagtg
tgttgagttggtgtatgaaggttggattagaggacccccttatttggcag
tgttttttttgttttgttttgttttgttttttctgtgtacactagctgag
ctggtctgtgaattccaattccagggattctttcatctctggttctcact
tgagcccaggaactttgaaattacagatcaatgttgccatttccagtgtt
ttatgaattctggggatttgaacttaagtcctcaggcttgcacaccaagc
actttaaaaaaccagttacccagctctgaacccatacacactcatttctg
ccagtgatggacctttcaagggtacttttgctgtccacataacatattca
tccagtataaaggggatctgtggattccaacccttaagccctcacaaata
aatgttcattatgttccttagctcctcattttacctaatgag
gaattctttgtttagctctaccccatttttcaatagggttatttgatttt
tctggaatccatattcttgagttctttatatatattggatattagttccc
tatctgatttaggattggtaaagaatctttcccaatctgttggtggccct
tttgccttatttacagatgataccaaattcttatttatatctttttattc
tagagtgggctgaaaactacttgtatcaatccaggagttctataaaatca
ttgtcaggaattatgaaatcatcatttcatcaaagcagtgttattacagg
aaagtttatctccatattgatctgcaggaaatttgcccaatgaggtgggc
tgatgcccaggattcattaggccatgtatgggtggcaggaaaggcatacc
aacagagagaagcaatcctgggatcaagtctctggggtccatgtatctca
gagcacacccatgtaaaatggtggactagctccaggtaactcacttgctt
gccatagccttccctgtataggttttgtcacaacctcttgctcatacacc
acaccctaatgaactcattcatcaccccatttccccccaaaagaatgcca
gatctgcttaataaaaataaccaaatgcaaaaagaggataagtgtgtcca
tgtatctttggttcccacagattagtcacaaaatgacaactttctgggat
ggactcagcaaccctcagactaaaagtacatcattgcactaaatgccatt
tcagaggatgaagccatcatggctgtgtcgaagcaggatcacgccacccg
gtttaatctgttgctgtaacagcgtcaggcatcagtggttggctcagtga
gctccatggtcagaaaaaaccatgtggtaacatagaccacatatgcagag
attcactgagacagggagctgagcgtctgttgaccttggaaagatgtaga
taagtgtctgatgctgtatgtgctgctgctctgtctcatagtgttcactt
gtagaaaagatgctagtcacattgatcagaggcatttcagaaatcagttg
atttgagcttaggttcaaatctacacttgtcaatcatgaatgtctcttaa
gtgaggtcaggaaggtgagcttggaatgacaaccctgagagaagagaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_107489097_107489938
seq2: B6Ng01-110L10.b_45_886 (reverse)

seq1  CTCATTAGTAAAAATGAAGAGCTAAGGAACAT-ATGTACATTTATTTGTG  49
      ||||||||  ||||||| |||||||||||||| ||| |||||||||||||
seq2  CTCATTAGGTAAAATGAGGAGCTAAGGAACATAATGAACATTTATTTGTG  50

seq1  AGGGCTTAAGGGTTAGAATCCACAGATCCCCTTTATACTGGATGAATATG  99
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGGGCTTAAGGGTTGGAATCCACAGATCCCCTTTATACTGGATGAATATG  100

seq1  TTATGTGGACAGCAAAGTTGCCCTTAGAAAGGTCCATCACTGGCAGAAAT  149
      ||||||||||||||||  | ||||| ||||||||||||||||||||||||
seq2  TTATGTGGACAGCAAAAGTACCCTT-GAAAGGTCCATCACTGGCAGAAAT  149

seq1  GAGTGTGTATGGGTTCAGAGCTGGGTAACTGGTTTTTTAAAGTGCTTGGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGTATGGGTTCAGAGCTGGGTAACTGGTTTTTTAAAGTGCTTGGT  199

seq1  GTGCAAGCCTGAGGACTTAAGTTCAAATCCCCAGAATTCATAAAACACTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAGCCTGAGGACTTAAGTTCAAATCCCCAGAATTCATAAAACACTG  249

seq1  GAAATGGCAACATTGATCTGTAATTTCAAAGTTCCTGGGCTCAAGTGAGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGCAACATTGATCTGTAATTTCAAAGTTCCTGGGCTCAAGTGAGA  299

seq1  ACCAGAGATGAAAGAATCCCTGGAATTGGAATTCACAGACCAGCTCAGCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAGATGAAAGAATCCCTGGAATTGGAATTCACAGACCAGCTCAGCT  349

seq1  AGTGTACACAGAAAAAACAAAACAAAACAAAACAAAAAAAACACTGCCAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTACACAGAAAAAACAAAACAAAACAAAACAAAAAAAACACTGCCAA  399

seq1  ATAAGGGGGTCCTCTAATCCAACCTTCATACACCAACTCAACACACTCTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGGGGTCCTCTAATCCAACCTTCATACACCAACTCAACACACTCTT  449

seq1  TCCCTCATATATGAAACAGACAAAAGTTGATGGAGAAAACAATACTCAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCATATATGAAACAGACAAAAGTTGATGGAGAAAACAATACTCAAT  499

seq1  ACTACCCTAAACAAAAAGAGCAGGTATGCAGAAAGAGTTCTGCTTTCTGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCCTAAACAAAAAGAGCAGGTATGCAGAAAGAGTTCTGCTTTCTGG  549

seq1  ATGTCACCTTTGAGCAATAGGAAAATGGGAACAATTTATACTTGTTCCAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACCTTTGAGCAATAGGAAAATGGGAACAATTTATACTTGTTCCAA  599

seq1  TCCACACAACACACACTATGGTGTGGGAATTAGATGCAAAAAAATCATTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACAACACACACTATGGTGTGGGAATTAGATGCAAAAAAATCATTG  649

seq1  ACTTAGAACTAAGAACTCTTCTCCCTGCTTGTTCCCTTTGCAGACGGTGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGAACTAAGAACTCTTCTCCCTGCTTGTTCCCTTTGCAGACGGTGG  699

seq1  CCAAGCTCTCTGGTTGTGAGGCCATGGATTCAGAGGCCCTGGTGCGCTGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCTCTCTGGTTGTGAGGCCATGGATTCAGAGGCCCTGGTGCGCTGT  749

seq1  CTGAGAGGCAAGAGTGAAGAGGAGATTCTAGCTATTAGCAAGGTTGGGAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGGCAAGAGTGAAGAGGAGATTCTAGCTATTAGCAAGGTTGGGAG  799

seq1  AGCTGTGTGTCTAGGAGAACCTGGTCTACATGTTGTGGAATTC  842
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGTGTCTAGGAGAACCTGGTCTACATGTTGTGGAATTC  842

seq1: chr8_107338015_107339186
seq2: B6Ng01-110L10.g_70_1218

seq1  GAATTCTTTGTTTAGCTCTACCCCATTTTTCAATAGGGTTATTTGATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTACCCCATTTTTCAATAGGGTTATTTGATTTT  50

seq1  TCTGGAATCCATATTCTTGAGTTCTTTATATATATTGGATATTAGTTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAATCCATATTCTTGAGTTCTTTATATATATTGGATATTAGTTCCC  100

seq1  TATCTGATTTAGGATTGGTAAAGAATCTTTCCCAATCTGTTGGTGGCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGATTTAGGATTGGTAAAGAATCTTTCCCAATCTGTTGGTGGCCCT  150

seq1  TTTGCCTTATTTACAGATGATACCAAATTCTTATTTATATCTTTTTATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTTATTTACAGATGATACCAAATTCTTATTTATATCTTTTTATTC  200

seq1  TAGAGTGGGCTGAAAACTACTTGTATCAATCCAGGAGTTCTATAAAATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTGGGCTGAAAACTACTTGTATCAATCCAGGAGTTCTATAAAATCA  250

seq1  TTGTCAGGAATTATGAAATCATCATTTCATCAAAGCAGTGTTATTACAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGGAATTATGAAATCATCATTTCATCAAAGCAGTGTTATTACAGG  300

seq1  AAAGTTTATCTCCATATTGATCTGCAGGAAATTTGCCCAATGAGGTGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTATCTCCATATTGATCTGCAGGAAATTTGCCCAATGAGGTGGGC  350

seq1  TGATGCCCAGGATTCATTAGGCCATGTATGGGTGGCAGGAAAGGCATACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCCCAGGATTCATTAGGCCATGTATGGGTGGCAGGAAAGGCATACC  400

seq1  AACAGAGAGAAGCAATCCTGGGATCAAGTCTCTGGGGTCCATGTATCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGAGAAGCAATCCTGGGATCAAGTCTCTGGGGTCCATGTATCTCA  450

seq1  GAGCACACCCATGTAAAATGGTGGACTAGCTCCAGGTAACTCACTTGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACACCCATGTAAAATGGTGGACTAGCTCCAGGTAACTCACTTGCTT  500

seq1  GCCATAGCCTTCCCTGTATAGGTTTTGTCACAACCTCTTGCTCATACACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATAGCCTTCCCTGTATAGGTTTTGTCACAACCTCTTGCTCATACACC  550

seq1  ACACCCTAATGAACTCATTCATCACCCCATTTCCCCCCAAAAGAATGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCTAATGAACTCATTCATCACCCCATTTCCCCCCAAAAGAATGCCA  600

seq1  GATCTGCTTAATAAAAATAACCAAATGCAAAAAGAGGATAAGTGTGTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCTTAATAAAAATAACCAAATGCAAAAAGAGGATAAGTGTGTCCA  650

seq1  TGTATCTTTGGTTCCCACAGATTAGTCACAAAATGACAACTTTCTGGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCTTTGGTTCCCACAGATTAGTCACAAAATGACAACTTTCTGGGAT  700

seq1  GGACTCAGCAACCCTCAGACTAAAAGTACATCATTGCACTAAATGCCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCAGCAACCCTCAGACTAAAAGTACATCATTGCACTAAATGCCATT  750

seq1  TCAGAGGATGAAGCCATCATGGCTGTGTCGAAGCAGGATCACGCCACCCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGATGAAGCCATCATGGCTGTGTCGAAGCAGGATCACGCCACCCG  800

seq1  GTTTAATCTGTTGCTGTAACAGCGTCAGGCATCAGTGGTTGGCTCAGTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAATCTGTTGCTGTAACAGCGTCAGGCATCAGTGGTTGGCTCAGTGA  850

seq1  GCTCCATGGTCAG-AAAAACCATGTGGTAACATAGACCACATATGCAGAG  899
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GCTCCATGGTCAGAAAAAACCATGTGGTAACATAGACCACATATGCAGAG  900

seq1  ATTCACTGAGGACAGGGAGCTGAGCGTCTGTTGACCTTGGAAAGATGTAG  949
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTGA-GACAGGGAGCTGAGCGTCTGTTGACCTTGGAAAGATGTAG  949

seq1  ATAAAGTTGTCTGATGCTTGTATGTGCTGCTGCTCTGTCCTCATTAGTG-  998
      ||||   |||||||||| |||||||||||||||||||| |||| ||||| 
seq2  ATAA--GTGTCTGATGC-TGTATGTGCTGCTGCTCTGT-CTCA-TAGTGT  994

seq1  TCACTTGGTAGAAAAGATGCTAGTCCACATGGATCAGAGGGCATTTCAGG  1048
      |||||| ||||||||||||||||| ||||| ||||||| |||||||||| 
seq2  TCACTT-GTAGAAAAGATGCTAGT-CACATTGATCAGA-GGCATTTCAG-  1040

seq1  AACATCAGGGTGATTTGAAGCTTAGGTTTTCCAAATTCTACAC-TGTCAA  1097
       | |||| | ||||||| ||||||||||   |||| ||||||| |||| |
seq2  -AAATCA-GTTGATTTG-AGCTTAGGTT---CAAA-TCTACACTTGTC-A  1082

seq1  ATCATGATGCTCTATAAGGTGAGGTGCCAGGGAGGTGGGAGCTTGTGGAA  1147
      |||||||   ||| | | |||||||  |||| ||||  ||||||   | |
seq2  ATCATGAATGTCTCTTAAGTGAGGT--CAGGAAGGT--GAGCTT---GGA  1125

seq1  ATGACAAACCCTGAGGAGAGAGAAG  1172
      ||||| |||||||||   |||||||
seq2  ATGAC-AACCCTGAGAGAAGAGAAG  1149