BAC Information

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BAC

Clone NameB6Ng01-112L15
Chromosome8 (Build37)
Map Location 85,365,292 - 85,507,427
singlet/doubletdoublet
Overlap geneRnf150
Upstream geneInpp4b, LOC671182, Il15, EG666564, LOC675800, EG666289, Zfp330
Downstream geneLOC100039688, Tbc1d9, Ucp1, Elmod2, 4933434I20Rik, Clgn, Scoc, LOC546077, LOC675854, Olfr370, Ndufb7, Gpsn2, Dnajb1, Gipc1, Ptger1, Pkn1, Ddx39, Cd97, EG384857, Lphn1, Asf1b, Prkaca
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112L15.bB6Ng01-112L15.g
ACCDH918716DH918717
length1,259655
definitionDH918716|Mus musculus domesticus DNA, BAC clone: B6Ng01-112L15, 5' end.DH918717|Mus musculus domesticus DNA, BAC clone: B6Ng01-112L15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,506,173 - 85,507,427)(85,365,292 - 85,365,946)
sequence
gaattccagtgttagcagagttaacctgctctaagctttgccctggcagt
tgtttgcccgccacccctacccgccacaccactccttccttctggtcctc
ttcagacctgcttttctgattcctctttacccgtgtcccaactagagatt
ctgctagtgctgaagctttccaaatgctacttcctgtctttccatctctc
tctgctcactgatgtcctctgtagcccatcagctcccacttggctcctct
ccttacccagcactcacataccacacgtagaaactctttgcaaaatactc
tttactcctttgttcttctgtttaaccacagaatgccaccccttccccca
tgctgccaactccacctttctaggtctctgcatcaccatgtgaaggaaga
agagacaaaggcttcagaaatcatcagcttccattgaaatccaatatcac
caagctcaaatgagtgctgtatattgtcctattctactcaacctttctcc
cttctcccaaaagatgacttcatacctcctgtctccctgacaacctccca
caccccttcccacccaccttctcaattactgacctcaaccacaagagttc
ttgaagaaaagtagctagcagcaggaaatactctgtcctattatgaaatg
aggtaattcacattgaaccacctggcataggacccatcatagaaaagcca
ctaaatacatgttaacttttattgataccattacatcgatagtgcaaaca
tacaaaccctccaccaccttccttttgttacagtacacatcccttatgct
gaagtggccaaatcctaccatcgagatgagccccacctgtcaccacatag
actgaggcttagactgggcacacagaaagtttgagttttggggaaggtag
aacttggtccccacagcttacctgcacaagttgtccctgtggtcttaaat
gaggactcctgttgaagctaatgtgtgtacttagaactgcaagggacaaa
ggaaactagaacattccctaaatggagaaagccataaaaaaggctgggaa
tagctgacatcagatcagcccatgactgggctgaatctgagaaggctctg
gacttttctcttggctccctccatttaaacatgatcactctcattggcaa
aatcccaatgtctgaaaacaatacagccttcttgctctccacaatggtag
gcctggagctcaacaattttacgagacatccctgatgtctctaacatcat
attttcctt
gaattctttccttccttccttcctgaggaagagagtgatggggcaggcaa
ttctgggaaaaaagcattcattaataaaatataaccccaccatctctaca
ctggtttatttggccgaggggggggggagggtcgtttcttgacaaataaa
caaaatgtcagctaaaagttagttaggaattgattgtgttaatgtttcat
ccactaaaggataagcagtgcaaagttataattcctaaagccttagggaa
tcgacacttgtgaccccacaactactgatgtcatttcccttggaatttta
aactgaatcaagcttggcttggtgaaaagacacattttcctctatgaaca
aatagtgacctccagtgactgaagaagggaaatacagccataaattgatt
ccccctttttaaattttgttttgttttgtttttttaataaattattttat
ttatttacattttaaatgttgccctactcctggtccccccagcagagttc
atcccctcatcccctaccccctttgcctatgagtgcgtggcccccatccc
tgtacattctttggttgatggctcagtctctgagagctcccaggggtcca
ggttagtcgactctgttggtcttcctgtgaagttgccaccccattcagtt
ccttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_85506173_85507427
seq2: B6Ng01-112L15.b_48_1306 (reverse)

seq1  AAGGAAAAT-TGA-GTTAGAGAACACTTAGAGATGTCATGAAAATATGTT  48
      ||||||||| ||| ||||||| ||| | || ||||||  | |||  ||||
seq2  AAGGAAAATATGATGTTAGAG-ACA-TCAGGGATGTCTCGTAAAATTGTT  48

seq1  GAGCTTCAGAGCCTA-CATTGTGGAGCGCAGAAGGGCTGTATGGTTTTCA  97
      ||||| ||| ||||| |||||||||| |||  | |||||||| |||||||
seq2  GAGCTCCAG-GCCTACCATTGTGGAGAGCAAGAAGGCTGTATTGTTTTCA  97

seq1  GCATTTGGGGATTTGCC-ATG-GAGTGATCATG-TTAAATGGA-GGAGGC  143
      |   |||||  |||||| ||| ||||||||||| ||||||||| |||| |
seq2  GACATTGGGATTTTGCCAATGAGAGTGATCATGTTTAAATGGAGGGAGCC  147

seq1  AAGAGAAAAGTCCAGAGCCTTCTGCAGATTCAGCCCAGTCATGGCTGGAT  193
      ||||||||||||||||||||||| ||||||||||||||||||||   |||
seq2  AAGAGAAAAGTCCAGAGCCTTCT-CAGATTCAGCCCAGTCATGGGCTGAT  196

seq1  CTGGATGTCAGCTATTCCCAGCCTTTTTTATGGCTTTCCTCCTTTAGGG-  242
      || |||||||||||||||||||||||||||||||||||  | ||||||| 
seq2  CT-GATGTCAGCTATTCCCAGCCTTTTTTATGGCTTTCTCCATTTAGGGA  245

seq1  ATGTTCTAGTTTCCTTTGTCCCTTGCAGTTCTAAGTACAACACCTTAGCC  292
      |||||||||||||||||||||||||||||||||||||| |||| ||||| 
seq2  ATGTTCTAGTTTCCTTTGTCCCTTGCAGTTCTAAGTAC-ACACATTAGCT  294

seq1  TC-ACAGGAGTCCTCATTTAAGACCACAGGGAC-ACTTGTGCAGGTAAGC  340
      || |||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCAACAGGAGTCCTCATTTAAGACCACAGGGACAACTTGTGCAGGTAAGC  344

seq1  TGTGGGGACCAAGTTCTACCTTCCCCATAACTCAAACTTTCTGTGTGCCC  390
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGTGGGGACCAAGTTCTACCTTCCCCAAAACTCAAACTTTCTGTGTGCCC  394

seq1  AGTCTAAGCCTCAGTCTATGTGGTGACAGGTGGGGCTCATCTCGATGGTA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAAGCCTCAGTCTATGTGGTGACAGGTGGGGCTCATCTCGATGGTA  444

seq1  GGATTTGGCCACTTCAGCATAAGGGATGTGTACTGTAACAAAAGGAAGGT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTGGCCACTTCAGCATAAGGGATGTGTACTGTAACAAAAGGAAGGT  494

seq1  GGTGGAGGGTTTGTATGTTTGCACTATCGATGTAATGGTATCAATAAAAG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAGGGTTTGTATGTTTGCACTATCGATGTAATGGTATCAATAAAAG  544

seq1  TTAACATGTATTTAGTGGCTTTTCTATGATGGGTCCTATGCCAGGTGGTT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATGTATTTAGTGGCTTTTCTATGATGGGTCCTATGCCAGGTGGTT  594

seq1  CAATGTGAATTACCTCATTTCATAATAGGACAGAGTATTTCCTGCTGCTA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTGAATTACCTCATTTCATAATAGGACAGAGTATTTCCTGCTGCTA  644

seq1  GCTACTTTTCTTCAAGAACTCTTGTGGTTGAGGTCAGTAATTGAGAAGGT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTTTCTTCAAGAACTCTTGTGGTTGAGGTCAGTAATTGAGAAGGT  694

seq1  GGGTGGGAAGGGGTGTGGGAGGTTGTCAGGGAGACAGGAGGTATGAAGTC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGGAAGGGGTGTGGGAGGTTGTCAGGGAGACAGGAGGTATGAAGTC  744

seq1  ATCTTTTGGGAGAAGGGAGAAAGGTTGAGTAGAATAGGACAATATACAGC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTGGGAGAAGGGAGAAAGGTTGAGTAGAATAGGACAATATACAGC  794

seq1  ACTCATTTGAGCTTGGTGATATTGGATTTCAATGGAAGCTGATGATTTCT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTTGAGCTTGGTGATATTGGATTTCAATGGAAGCTGATGATTTCT  844

seq1  GAAGCCTTTGTCTCTTCTTCCTTCACATGGTGATGCAGAGACCTAGAAAG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCTTTGTCTCTTCTTCCTTCACATGGTGATGCAGAGACCTAGAAAG  894

seq1  GTGGAGTTGGCAGCATGGGGGAAGGGGTGGCATTCTGTGGTTAAACAGAA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGTTGGCAGCATGGGGGAAGGGGTGGCATTCTGTGGTTAAACAGAA  944

seq1  GAACAAAGGAGTAAAGAGTATTTTGCAAAGAGTTTCTACGTGTGGTATGT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAAGGAGTAAAGAGTATTTTGCAAAGAGTTTCTACGTGTGGTATGT  994

seq1  GAGTGCTGGGTAAGGAGAGGAGCCAAGTGGGAGCTGATGGGCTACAGAGG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCTGGGTAAGGAGAGGAGCCAAGTGGGAGCTGATGGGCTACAGAGG  1044

seq1  ACATCAGTGAGCAGAGAGAGATGGAAAGACAGGAAGTAGCATTTGGAAAG  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAGTGAGCAGAGAGAGATGGAAAGACAGGAAGTAGCATTTGGAAAG  1094

seq1  CTTCAGCACTAGCAGAATCTCTAGTTGGGACACGGGTAAAGAGGAATCAG  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCACTAGCAGAATCTCTAGTTGGGACACGGGTAAAGAGGAATCAG  1144

seq1  AAAAGCAGGTCTGAAGAGGACCAGAAGGAAGGAGTGGTGTGGCGGGTAGG  1190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAGGTCTGAAGAGGACCAGAAGGAAGGAGTGGTGTGGCGGGTAGG  1194

seq1  GGTGGCGGGCAAACAACTGCCAGGGCAAAGCTTAGAGCAGGTTAACTCTG  1240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCGGGCAAACAACTGCCAGGGCAAAGCTTAGAGCAGGTTAACTCTG  1244

seq1  CTAACACTGGAATTC  1255
      |||||||||||||||
seq2  CTAACACTGGAATTC  1259

seq1: chr8_85365292_85365946
seq2: B6Ng01-112L15.g_69_723

seq1  GAATTCTTTCCTTCCTTCCTTCCTGAGGAAGAGAGTGATGGGGCAGGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCTTCCTTCCTTCCTGAGGAAGAGAGTGATGGGGCAGGCAA  50

seq1  TTCTGGGAAAAAAGCATTCATTAATAAAATATAACCCCACCATCTCTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGAAAAAAGCATTCATTAATAAAATATAACCCCACCATCTCTACA  100

seq1  CTGGTTTATTTGGCCGAGGGGGGGGGGAGGGTCGTTTCTTGACAAATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTATTTGGCCGAGGGGGGGGGGAGGGTCGTTTCTTGACAAATAAA  150

seq1  CAAAATGTCAGCTAAAAGTTAGTTAGGAATTGATTGTGTTAATGTTTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGTCAGCTAAAAGTTAGTTAGGAATTGATTGTGTTAATGTTTCAT  200

seq1  CCACTAAAGGATAAGCAGTGCAAAGTTATAATTCCTAAAGCCTTAGGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTAAAGGATAAGCAGTGCAAAGTTATAATTCCTAAAGCCTTAGGGAA  250

seq1  TCGACACTTGTGACCCCACAACTACTGATGTCATTTCCCTTGGAATTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGACACTTGTGACCCCACAACTACTGATGTCATTTCCCTTGGAATTTTA  300

seq1  AACTGAATCAAGCTTGGCTTGGTGAAAAGACACATTTTCCTCTATGAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAATCAAGCTTGGCTTGGTGAAAAGACACATTTTCCTCTATGAACA  350

seq1  AATAGTGACCTCCAGTGACTGAAGAAGGGAAATACAGCCATAAATTGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTGACCTCCAGTGACTGAAGAAGGGAAATACAGCCATAAATTGATT  400

seq1  CCCCCTTTTTAAATTTTGTTTTGTTTTGTTTTTTTAATAAATTATTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTTTTTAAATTTTGTTTTGTTTTGTTTTTTTAATAAATTATTTTAT  450

seq1  TTATTTACATTTTAAATGTTGCCCTACTCCTGGTCCCCCCAGCAGAGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTACATTTTAAATGTTGCCCTACTCCTGGTCCCCCCAGCAGAGTTC  500

seq1  ATCCCCTCATCCCCTACCCCCTTTGCCTATGAGTGCGTGGCCCCCATCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTCATCCCCTACCCCCTTTGCCTATGAGTGCGTGGCCCCCATCCC  550

seq1  TGTACATTCTTTGGTTGATGGCTCAGTCTCTGAGAGCTCCCAGGGGTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATTCTTTGGTTGATGGCTCAGTCTCTGAGAGCTCCCAGGGGTCCA  600

seq1  GGTTAGTCGACACTGTTGGTCTTCCTGTGAAGTTGCCACCCCATTCAGTT  650
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGTCGACTCTGTTGGTCTTCCTGTGAAGTTGCCACCCCATTCAGTT  650

seq1  CCTTC  655
      |||||
seq2  CCTTC  655