BAC Information

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BAC

Clone NameB6Ng01-113L08
Chromosome8 (Build37)
Map Location 115,097,873 - 115,240,255
singlet/doubletdoublet
Overlap geneCntnap4
Upstream geneZnrf1, Ldhd, Zfp1, Ctrb1, Bcar1, Cfdp1, Tmem170, Chst5, 4932417I16Rik, Gabarapl2, Adat1, Kars, Terf2ip, EG627828, LOC672498, LOC100042040
Downstream geneLOC100042061, Mon1b, 4930481F22Rik, Adamts18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113L08.bB6Ng01-113L08.g
ACCDH919432DH919433
length6611,142
definitionDH919432|Mus musculus domesticus DNA, BAC clone: B6Ng01-113L08, 5' end.DH919433|Mus musculus domesticus DNA, BAC clone: B6Ng01-113L08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,239,595 - 115,240,255)(115,097,873 - 115,099,028)
sequence
gaattcctcttggttgacacctgtagtgtggagtccattgttgcatactt
tccagttgccttttgaagacttccagaataatcacaagttctcagactaa
cttataaaaataatgagtaaagtagtaacatgctcaatgacctccactga
tgttgtgtgccttcagggctgaacatcatggcggtgtaagaattgaaata
agcattctctaagaacactaggacctctggcagatccctggggagtggaa
ttgtgagtgagaggcaggttgtgcggatgaggtaatgagtagagcacaga
atcggagatcaacagctctcaccatgaaatggtctttccttctgactgca
ctgagctctttggatgagtagaatgttgattatgtgtgaaacataaaaca
tgggttgccagtaaatttcaaaactggctatttaataacgtaaaagaatt
attatcttttagttttgatcaagaaaggctcttgcttttcagagatttgg
actgaaatactgaagggtgaaatgttattaggtatgaaatatgcttcaaa
ataataataggtggacaagcaatatataaaggaaagacatgggttaagat
tggccataggctgatggttattcaagctggggatgggcaatgggtagtgt
tgttgttgttg
gaattcatgtcacattaaaacaataaaagaccatcagtagactttttttt
cttcaataaaaatagatcagtggaattgcatgtggtcattggaaaggggt
tgtaatatttactcaggtgttggcagaatatggcccatgggacacatctg
cccttacacctgtctttatgtggactatgaactaacagtgggtttgcatc
tttacctgaaaaaaaaaaaaaacaaatttaagtgatttttttttgtggca
gaaaatgacagtgtgaaatttgaatttttgtcacctgtctcacttatgca
acagcatgagcaagatttgtatttacatattattatattttgaatttgat
tggtaagattttgttagaattgtctttattcttgctttataagtatctat
gtaatattctgtattgtctatctgcccctttgtaaaaaaaacccaaaaaa
caaaacaaaaaacctccattgacctctgatgtgtgatgtatggtgcaatg
atgaactataggtgtgcatagattatattaattgattaaaaatgttctta
tgtcattaattacacacatactgaaggagctgttcacccgactggcaagt
atatcaggagatcatattttccctgtttgtttctcctagatgactatttt
tgagaaatctcatttctacaactatgcaatacctccattttattagtaaa
tgtctacagcacttttggtggctaagggggcatttttaatctcgagtaat
tcgattagtatgcagtgcttaataaatatgtgagcaagaaactctgtctc
aaaaacaaaacaaaaacaaaaaataaaataaataaatatgtgagcaatat
caccccagatattttaggatgaaaatcttgctcttaaccttacatggtca
cgagcataaactattctactcttttatgagtcagacttggatttggaatc
aaatgatcatagggaaacggtcttgtttgaagaacgtcttgcttgaatgt
actcgggagcttcctcaaaagcttaaattggcaaactttcagaacaaatt
gaaaaatagattttcatttaaggcacacccactgagaattcacatattta
ggcagtcttctacctactcatggcaaggtaattaattgtatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_115239595_115240255
seq2: B6Ng01-113L08.b_48_708 (reverse)

seq1  CAACAACAACAACACTACCCATTGCCCATCCCCAGCTTGAATAACCATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACAACAACACTACCCATTGCCCATCCCCAGCTTGAATAACCATCA  50

seq1  GCCTATGGCCAATCTTAACCCATGTCTTTCCTTTATATATTGCTTGTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATGGCCAATCTTAACCCATGTCTTTCCTTTATATATTGCTTGTCCA  100

seq1  CCTATTATTATTTTGAAGCATATTTCATACCTAATAACATTTCACCCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTATTATTTTGAAGCATATTTCATACCTAATAACATTTCACCCTTC  150

seq1  AGTATTTCAGTCCAAATCTCTGAAAAGCAAGAGCCTTTCTTGATCAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTCAGTCCAAATCTCTGAAAAGCAAGAGCCTTTCTTGATCAAAAC  200

seq1  TAAAAGATAATAATTCTTTTACGTTATTAAATAGCCAGTTTTGAAATTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGATAATAATTCTTTTACGTTATTAAATAGCCAGTTTTGAAATTTA  250

seq1  CTGGCAACCCATGTTTTATGTTTCACACATAATCAACATTCTACTCATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAACCCATGTTTTATGTTTCACACATAATCAACATTCTACTCATCC  300

seq1  AAAGAGCTCAGTGCAGTCAGAAGGAAAGACCATTTCATGGTGAGAGCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCTCAGTGCAGTCAGAAGGAAAGACCATTTCATGGTGAGAGCTGT  350

seq1  TGATCTCCGATTCTGTGCTCTACTCATTACCTCATCCGCACAACCTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTCCGATTCTGTGCTCTACTCATTACCTCATCCGCACAACCTGCCT  400

seq1  CTCACTCACAATTCCACTCCCCAGGGATCTGCCAGAGGTCCTAGTGTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCACAATTCCACTCCCCAGGGATCTGCCAGAGGTCCTAGTGTTCT  450

seq1  TAGAGAATGCTTATTTCAATTCTTACACCGCCATGATGTTCAGCCCTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAATGCTTATTTCAATTCTTACACCGCCATGATGTTCAGCCCTGAA  500

seq1  GGCACACAACATCAGTGGAGGTCATTGAGCATGTTACTACTTTACTCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACACAACATCAGTGGAGGTCATTGAGCATGTTACTACTTTACTCATT  550

seq1  ATTTTTATAAGTTAGTCTGAGAACTTGTGATTATTCTGGAAGTCTTCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATAAGTTAGTCTGAGAACTTGTGATTATTCTGGAAGTCTTCAAA  600

seq1  AGGCAACTGGAAAGTATGCAACAATGGACTCCACACTACAGGTGTCAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACTGGAAAGTATGCAACAATGGACTCCACACTACAGGTGTCAACC  650

seq1  AAGAGGAATTC  661
      |||||||||||
seq2  AAGAGGAATTC  661

seq1: chr8_115097873_115099028
seq2: B6Ng01-113L08.g_70_1211

seq1  GAATTCATGTCACATTAAAACAATAAAAGACCATCAGTAGACTTTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTCACATTAAAACAATAAAAGACCATCAGTAGACTTTTTTTT  50

seq1  CTTCAATAAAAATAGATCAGTGGAATTGCATGTGGTCATTGGAAAGGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAATAAAAATAGATCAGTGGAATTGCATGTGGTCATTGGAAAGGGGT  100

seq1  TGTAATATTTACTCAGGTGTTGGCAGAATATGGCCCATGGGACACATCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATATTTACTCAGGTGTTGGCAGAATATGGCCCATGGGACACATCTG  150

seq1  CCCTTACACCTGTCTTTATGTGGACTATGAACTAACAGTGGGTTTGCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTACACCTGTCTTTATGTGGACTATGAACTAACAGTGGGTTTGCATC  200

seq1  TTTACCTGAAAAAAAAAAAAAACAAATTTAAGTGATTTTTTTTTGTGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTGAAAAAAAAAAAAAACAAATTTAAGTGATTTTTTTTTGTGGCA  250

seq1  GAAAATGACAGTGTGAAATTTGAATTTTTGTCACCTGTCTCACTTATGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGACAGTGTGAAATTTGAATTTTTGTCACCTGTCTCACTTATGCA  300

seq1  ACAGCATGAGCAAGATTTGTATTTACATATTATTATATTTTGAATTTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATGAGCAAGATTTGTATTTACATATTATTATATTTTGAATTTGAT  350

seq1  TGGTAAGATTTTGTTAGAATTGTCTTTATTCTTGCTTTATAAGTATCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAGATTTTGTTAGAATTGTCTTTATTCTTGCTTTATAAGTATCTAT  400

seq1  GTAATATTCTGTATTGTCTATCTGCCCCTTTGTAAAAAAAACCCAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATATTCTGTATTGTCTATCTGCCCCTTTGTAAAAAAAACCCAAAAAA  450

seq1  CAAAACAAAAAACCTCCATTGACCTCTGATGTGTGATGTATGGTGCAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAAAAACCTCCATTGACCTCTGATGTGTGATGTATGGTGCAATG  500

seq1  ATGAACTATAGGTGTGCATAGATTATATTAATTGATTAAAAATGTTCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTATAGGTGTGCATAGATTATATTAATTGATTAAAAATGTTCTTA  550

seq1  TGTCATTAATTACACACATACTGAAGGAGCTGTTCACCCGACTGGCAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTAATTACACACATACTGAAGGAGCTGTTCACCCGACTGGCAAGT  600

seq1  ATATCAGGAGATCATATTTTCCCTGTTTGTTTCTCCTAGATGACTATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAGGAGATCATATTTTCCCTGTTTGTTTCTCCTAGATGACTATTTT  650

seq1  TGAGAAATCTCATTTCTACAACTATGCAATACCTCCATTTTATTAGTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAATCTCATTTCTACAACTATGCAATACCTCCATTTTATTAGTAAA  700

seq1  TGTCTACAGCACTTTTGGTGGCTAAGGGGGCATTTTTAATCTCGAGTAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTACAGCACTTTTGGTGGCTAAGGGGGCATTTTTAATCTCGAGTAAT  750

seq1  TCGATTAGTATGCAGTGCTTAATAAATATGTGAGCAAGAAACTCTGTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATTAGTATGCAGTGCTTAATAAATATGTGAGCAAGAAACTCTGTCTC  800

seq1  AAAAAACAAAACAAAAACAAAAAATAAAATAAATAAATATGTGAGCAATA  850
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -AAAAACAAAACAAAAACAAAAAATAAAATAAATAAATATGTGAGCAATA  849

seq1  TCACCCCAGATA-TTTAGGATGAAAATCCTGCTCTTAACCTTACATGGTC  899
      |||||||||||| ||||||||||||||| |||||||||||||||||||||
seq2  TCACCCCAGATATTTTAGGATGAAAATCTTGCTCTTAACCTTACATGGTC  899

seq1  ACGAGCATAAACTATTCTACTCTTTTATGAGTCAGAACTTGGATTTGGAA  949
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ACGAGCATAAACTATTCTACTCTTTTATGAGTCAG-ACTTGGATTTGGAA  948

seq1  TCAAATTGATCATAGGGAAAACGGTCTTGTTTGAAGAACGTTCTTGCTTT  999
      ||||| ||||||||||| |||||||||||||||||||||| |||||| ||
seq2  TCAAA-TGATCATAGGG-AAACGGTCTTGTTTGAAGAACG-TCTTGC-TT  994

seq1  GAATGTAACTCGGGAGCTTCCTCAAAAAGCTCAAATTGGCAAACTTTCTA  1049
      |||||| |||||||||||||||| ||||||| |||||||||||||||| |
seq2  GAATGT-ACTCGGGAGCTTCCTC-AAAAGCTTAAATTGGCAAACTTTC-A  1041

seq1  GAACAAATTGAAAAAATAGATTTTCATTTAA-GCACAACCCACTGAGAAT  1098
      |||||||||| |||||||||||||||||||| |||| |||||||||||||
seq2  GAACAAATTG-AAAAATAGATTTTCATTTAAGGCAC-ACCCACTGAGAAT  1089

seq1  TCACAATAATTAAGCAAGTGCTTTCTACCTACTCATGCCAGCGTAATTAA  1148
      |||| ||| ||| |||   |  ||||||||||||||| ||  ||||||||
seq2  TCAC-ATATTTAGGCA---GTCTTCTACCTACTCATGGCAAGGTAATTAA  1135

seq1  TTTGTATG  1156
       |||||||
seq2  -TTGTATG  1142