BAC Information

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BAC

Clone NameB6Ng01-113P06
Chromosome8 (Build37)
Map Location 79,742,260 - 79,922,990
singlet/doubletdoublet
Overlap geneNr3c2, Arhgap10
Upstream geneLOC100039185, EG631594, LOC666226, LOC100039211, LOC384847
Downstream geneLOC100039235, AI931714, Tmem34, Ednra, EG622803, Ttc29
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113P06.bB6Ng01-113P06.g
ACCDH919604DH919605
length1,032212
definitionDH919604|Mus musculus domesticus DNA, BAC clone: B6Ng01-113P06, 5' end.DH919605|Mus musculus domesticus DNA, BAC clone: B6Ng01-113P06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,742,260 - 79,743,295)(79,922,779 - 79,922,990)
sequence
gaattcattgtccaggtttggcttgtagggtttgaatgatagatttctct
actctgagaaggaaaatgctgacagtctcagtggccaagattatagcaat
agtcgtgtagaagcagaagtcagtttctggccctgcagtgttctttcctc
tgggctgttggcccaggaactcaggtcactttctagtgctttgtatgggg
attgctgctttctctgaactttcccaaaaacaaaaggcaagctcctcttc
aggtgagctcagagatgagtagatgtggcattatagtgtgattggaaaca
tcttagaagtgtaaggtgatggttggcaaggctcatgccttaccctgaaa
aacaacacagggggtttagaacaactctcccgtgttcagtgttattttgg
cttattatctgcaagaggtcagatgtgttttccccactaatctcattgaa
atcccttcttattagagataacagttccatcttatagttcattctcagtg
aattctgttaattgtgcaaaggcaaagagcactatcaaatttagtaggtg
gacatggagacatgggtaagagtgttttctaagcaagcatgaagaactga
gttcaaatccccagtgcccacctaatagcgggcatggctatcctcatagg
caggaagcttgttggagcttactaactgccagcccagctctaggttcatg
agagaccctgctttaagggaataagtaagagacagaagagcagggcatcc
aatgtatctcctctgttgtccactgtatctggggaattccctgtgtcatc
caggctgattcgacatatttagtgtcacgggtgttctattatttagatat
tgttgatgtacaataagctgagcacatttaaaatacatagttaagtcttg
aaacagccatacatccagggcattagcacagcaaccaagctagtaccgaa
tccagcttatagatgctttccacagctgaggtgatctctgctctctctgg
ctaggcgttcttcttggcttctgttggaggct
ttttactcaggctgggaaggcctttatccgaggttttcatggctggagag
tgtttggactaaagataaatggtcctctttccccagaatgtgactgttct
aacccagtacgttaaggaaagggcagtagcttagcttccccgttgggcta
ttacagaggaagaacagacaagcatttaaggttttggggaggattggggg
tggggcaggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_79742260_79743295
seq2: B6Ng01-113P06.b_50_1081

seq1  GAATTCATTGTCCAGGTTTGGCTTGTAGGGTTTGAATGATAGATTTCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTCCAGGTTTGGCTTGTAGGGTTTGAATGATAGATTTCTCT  50

seq1  ACTCTGAGAAGGAAAATGCTGACAGTCTCAGTGGCCAAGATTATAGCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGAGAAGGAAAATGCTGACAGTCTCAGTGGCCAAGATTATAGCAAT  100

seq1  AGTCGTGTAGAAGCAGAAGTCAGTTTCTGGCCCTGCAGTGTTCTTTCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGTGTAGAAGCAGAAGTCAGTTTCTGGCCCTGCAGTGTTCTTTCCTC  150

seq1  TGGGCTGTTGGCCCAGGAACTCAGGTCACTTTCTAGTGCTTTGTATGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTGTTGGCCCAGGAACTCAGGTCACTTTCTAGTGCTTTGTATGGGG  200

seq1  ATTGCTGCTTTCTCTGAACTTTCCCAAAAACAAAAGGCAAGCTCCTCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGCTTTCTCTGAACTTTCCCAAAAACAAAAGGCAAGCTCCTCTTC  250

seq1  AGGTGAGCTCAGAGATGAGTAGATGTGGCATTATAGTGTGATTGGAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAGCTCAGAGATGAGTAGATGTGGCATTATAGTGTGATTGGAAACA  300

seq1  TCTTAGAAGTGTAAGGTGATGGTTGGCAAGGCTCATGCCTTACCCTGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGAAGTGTAAGGTGATGGTTGGCAAGGCTCATGCCTTACCCTGAAA  350

seq1  AACAACACAGGGGGTTTAGAACAACTCTCCCGTGTTCAGTGTTATTTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACACAGGGGGTTTAGAACAACTCTCCCGTGTTCAGTGTTATTTTGG  400

seq1  CTTATTATCTGCAAGAGGTCAGATGTGTTTTCCCCACTAATCTCATTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTATCTGCAAGAGGTCAGATGTGTTTTCCCCACTAATCTCATTGAA  450

seq1  ATCCCTTCTTATTAGAGATAACAGTTCCATCTTATAGTTCATTCTCAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTTCTTATTAGAGATAACAGTTCCATCTTATAGTTCATTCTCAGTG  500

seq1  AATTCTGTTAATTGTGCAAAGGCAAAGAGCACTATCAAATTTAGTAGGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGTTAATTGTGCAAAGGCAAAGAGCACTATCAAATTTAGTAGGTG  550

seq1  GACATGGAGACATGGGTAAGAGTGTTTTCTAAGCAAGCATGAAGAACTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGGAGACATGGGTAAGAGTGTTTTCTAAGCAAGCATGAAGAACTGA  600

seq1  GTTCAAATCCCCAGTGCCCACCTAATAGCGGGCATGGCTATCCTCATAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAATCCCCAGTGCCCACCTAATAGCGGGCATGGCTATCCTCATAGG  650

seq1  CAGGAAGCTTGTTGGAGCTTACTAACTGCCAGCCCAGCTCTAGGTTCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGCTTGTTGGAGCTTACTAACTGCCAGCCCAGCTCTAGGTTCATG  700

seq1  AGAGACCCTGCTTTAAGGGAATAAGTAAGAGACAGAAGAGCAGGGCATCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACCCTGCTTTAAGGGAATAAGTAAGAGACAGAAGAGCAGGGCATCC  750

seq1  AATGTATCTCCTCTGTTGTCCACTGTATCTGGGGAATT-CCTGTGTCATC  799
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AATGTATCTCCTCTGTTGTCCACTGTATCTGGGGAATTCCCTGTGTCATC  800

seq1  CAGGCTGATTCGACATAATTTAGTGTCAC-GGTGTTCTATTATTTAGATA  848
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  CAGGCTGATTCGACAT-ATTTAGTGTCACGGGTGTTCTATTATTTAGATA  849

seq1  TAGTTGATGTACAATAAGCTGAGCACA-TTAAAATACATAGTTTAAGTCT  897
      | ||||||||||||||||||||||||| ||||||||||||| ||||||||
seq2  TTGTTGATGTACAATAAGCTGAGCACATTTAAAATACATAG-TTAAGTCT  898

seq1  TGAAACAGCCATACATCCAGGGCACTAGCACAGCAACCAAGCTAGTACCG  947
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGAAACAGCCATACATCCAGGGCATTAGCACAGCAACCAAGCTAGTACCG  948

seq1  TATCCAGC-TATAGATGCTTTCCCACAGCCTGAGGTGATCTTCTGCTCTC  996
       ||||||| |||||||||||| |||||| ||||||||||| |||||||||
seq2  AATCCAGCTTATAGATGCTTT-CCACAG-CTGAGGTGATC-TCTGCTCTC  995

seq1  TCCTGGCTAGGCGTTCTCTTTGGCTTCCTGTTGGCAGGCT  1036
      | |||||||||||||||  ||||||| ||||||| |||||
seq2  T-CTGGCTAGGCGTTCTTCTTGGCTT-CTGTTGG-AGGCT  1032

seq1: chr8_79922779_79922990
seq2: B6Ng01-113P06.g_75_286 (reverse)

seq1  TCTCCTGCCCCACCCCCAATCCTCCCCAAAACCTTAAATGCTTGTCTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGCCCCACCCCCAATCCTCCCCAAAACCTTAAATGCTTGTCTGTT  50

seq1  CTTCCTCTGTAATAGCCCAACGGGGAAGCTAAGCTACTGCCCTTTCCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCTGTAATAGCCCAACGGGGAAGCTAAGCTACTGCCCTTTCCTTA  100

seq1  ACGTACTGGGTTAGAACAGTCACATTCTGGGGAAAGAGGACCATTTATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTACTGGGTTAGAACAGTCACATTCTGGGGAAAGAGGACCATTTATCT  150

seq1  TTAGTCCAAACACTCTCCAGCCATGAAAACCTCGGATAAAGGCCTTCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCCAAACACTCTCCAGCCATGAAAACCTCGGATAAAGGCCTTCCCA  200

seq1  GCCTGAGTAAAA  212
      ||||||||||||
seq2  GCCTGAGTAAAA  212