BAC Information

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BAC

Clone NameB6Ng01-114F08
Chromosome8 (Build37)
Map Location 103,856,395 - 103,975,456
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042086, LOC100042092, LOC384895
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114F08.bB6Ng01-114F08.g
ACCDH919878DH919879
length9861,210
definitionDH919878|Mus musculus domesticus DNA, BAC clone: B6Ng01-114F08, 5' end.DH919879|Mus musculus domesticus DNA, BAC clone: B6Ng01-114F08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,856,395 - 103,857,378)(103,974,210 - 103,975,456)
sequence
gaattcactcagaaacaacttgagctgtgcttaatcctaggagtatggag
gaaaagagttaaataacacttctcttgctgctgctgtgcccactgatact
tttccaaaaggccagtaccatatgcagataaggaaagaagaagggacatt
gagtggtattagacaatcacacgtaattatatagaatccaggtaaggctt
tatagaaaagccaggaaagacattccttttgctcaggagtttgctttcag
agggaggagaaatggtgtgggttatgaagctcactctcattcaaattaat
ggcttctttcttattgttttcatgtccatatgtttatgagtatacatgta
tatattcctaaatagaacttgctcagggaatgtaatgttactcccatgca
cactttcagtgctgatcctctggtgttggataaacaatgagtgagctcat
ccgagtaagcctgttcctcataccctcagctttcctcacttgcatcctcc
tggtcttgtcccaatgacctttggcatggctttttcagctcataaaccta
gctaattacccagatatagaaaagaaatggatattggaggagagtctgta
gccaccatttaactaaactttcataatccctgactacatcataaatatta
tcccttatgcccagagataggcataatggtcacccctcattaaggaaagt
tttctttaccataaatggagaccattacagaagaccccaactaaaaaaat
gtgtaagtatggagcccagacccaatatacatccagaaaacaactttact
ttatttcatcaaaaagataaattttctacacatttcttacatttatataa
aatgtttttagttattaagggagaaaagacagaaaatattgttagagggg
atccttggataaatagaaatgatacttattaattccccagaaccattctt
agtcagtggattaactcctcttccactttaggatta
gaattccattccattttggatacttatattttttaaaagagcatcactaa
agatgaatttagagaaaaagtaaagaacattttagatagggctctaagga
atctcatttgtaggttattcctgatctattttttgttttgtttttttttt
ttttttaatgtggaaatttgtatctctagcccaaggtacagcgaaatgaa
acaaaggttttttcagtaaacaatatcaggaatatagatatctacaattc
taccgttcattctcatagattgagatttagaaaaaaagctcccaagttat
ataaaatacaatacaaatctcacactgcagattcatattctatacacaga
cacaaaattatacagtataatcaaaggtcaaattgaagaaaaataaagaa
taaattcactggtgcttcagtatgcttctgcccgaccactactgattcca
ctgattgtactgccccttctaataaataactgcagcatagatttttttct
tctaatgcaagaatattcaaactctagtgtatgatttattgatttttgct
gaggaggaaacagaaagctggaagtggaaaaccatcaactggatactgtg
atgctgatagggaacataaatatgttttctttgctttttctttgattttt
gtttgttttattgtttattttcatcttttttatttatatatagataatgc
ttctactttgaggcttctttttttttaatcttatgaattttgttcctttt
tatttggatatacttacacatccaagctctaataattatgactactcatt
aggcattttatttttatatttctacactggctccacgccaaaagcacctt
tatactagttcagttatcatatgtttatagtgatatattgatttcagtcc
ctagcacagtctgacacacttggttagtgtttaactttgttgactaaata
taattcaattataaccacctcagctaaacagtggttactttgttaaaaca
ccactaattctgcctaggtcaccttatctatataattattaaaatatcta
gacaaatattagagtgacaggagttctggatcagtaactgacctcatcta
catctataaccatgctgccttttttcattctgcagaatattagaactatg
tgccgagactacatgagagtatataagaactggaccttgtgcaggtcatt
ccttgatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_103856395_103857378
seq2: B6Ng01-114F08.b_47_1032

seq1  GAATTCACTCAGAAACAACTTGAGCTGTGCTTAATCCTAGGAGTATGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCAGAAACAACTTGAGCTGTGCTTAATCCTAGGAGTATGGAG  50

seq1  GAAAAGAGTTAAATAACACTTCTCTTGCTGCTGCTGTGCCCACTGATACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAGTTAAATAACACTTCTCTTGCTGCTGCTGTGCCCACTGATACT  100

seq1  TTTCCAAAAGGCCAGTACCATATGCAGATAAGGAAAGAAGAAGGGACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAAAAGGCCAGTACCATATGCAGATAAGGAAAGAAGAAGGGACATT  150

seq1  GAGTGGTATTAGACAATCACACGTAATTATATAGAATCCAGGTAAGGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGTATTAGACAATCACACGTAATTATATAGAATCCAGGTAAGGCTT  200

seq1  TATAGAAAAGCCAGGAAAGACATTCCTTTTGCTCAGGAGTTTGCTTTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAAAAGCCAGGAAAGACATTCCTTTTGCTCAGGAGTTTGCTTTCAG  250

seq1  AGGGAGGAGAAATGGTGTGGGTTATGAAGCTCACTCTCATTCAAATTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGAGAAATGGTGTGGGTTATGAAGCTCACTCTCATTCAAATTAAT  300

seq1  GGCTTCTTTCTTATTGTTTTCATGTCCATATGTTTATGAGTATACATGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCTTTCTTATTGTTTTCATGTCCATATGTTTATGAGTATACATGTA  350

seq1  TATATTCCTAAATAGAACTTGCTCAGGGAATGTAATGTTACTCCCATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCCTAAATAGAACTTGCTCAGGGAATGTAATGTTACTCCCATGCA  400

seq1  CACTTTCAGTGCTGATCCTCTGGTGTTGGATAAACAATGAGTGAGCTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTCAGTGCTGATCCTCTGGTGTTGGATAAACAATGAGTGAGCTCAT  450

seq1  CCGAGTAAGCCTGTTCCTCATACCCTCAGCTTTCCTCACTTGCATCCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGTAAGCCTGTTCCTCATACCCTCAGCTTTCCTCACTTGCATCCTCC  500

seq1  TGGTCTTGTCCCAATGACCTTTGGCATGGCTTTTTCAGCTCATAAACCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTGTCCCAATGACCTTTGGCATGGCTTTTTCAGCTCATAAACCTA  550

seq1  GCTAATTACCCAGATATAGAAAAGAAATGGATATTGGAGGAGAGTCTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATTACCCAGATATAGAAAAGAAATGGATATTGGAGGAGAGTCTGTA  600

seq1  GCCACCATTTAACTAAACTTTCATAATCCCTGACTACATCATAAATATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCATTTAACTAAACTTTCATAATCCCTGACTACATCATAAATATTA  650

seq1  TCCCTTATGCCCAGAGATAGGCATAATGGTCACCCCTCATTAAGGAAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTATGCCCAGAGATAGGCATAATGGTCACCCCTCATTAAGGAAAGT  700

seq1  TTTCTTTACCATAAATGGAGACCATTACAGAAGACCCCAACTAAAAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTACCATAAATGGAGACCATTACAGAAGACCCCAACTAAAAAAAT  750

seq1  GTGTAAGTATGGAGCCCAGACCCAATATACATCCAGAAAACAACTTTACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAGTATGGAGCCCAGACCCAATATACATCCAGAAAACAACTTTACT  800

seq1  TTATTTCATCAAAAAGAT-AATTTTCTACACATTTCTTACATTAATATAA  849
      |||||||||||||||||| |||||||||||||||||||||||| ||||||
seq2  TTATTTCATCAAAAAGATAAATTTTCTACACATTTCTTACATTTATATAA  850

seq1  AATGTTTTTAGTTATTAAGGGAGAAAAGACAGAAAAATATTGTCAGAGGG  899
      |||||||||||||||||||||||||||||||| |||||||||| ||||||
seq2  AATGTTTTTAGTTATTAAGGGAGAAAAGACAG-AAAATATTGTTAGAGGG  899

seq1  GATCC-TGGATAAATAGAAATGATACTTATTAATTCCCCAGAACCATTCT  948
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTTGGATAAATAGAAATGATACTTATTAATTCCCCAGAACCATTCT  949

seq1  TAGTCAGTGGATTAACT-CTCTTCCACTTTAGGATTA  984
      ||||||||||||||||| |||||||||||||||||||
seq2  TAGTCAGTGGATTAACTCCTCTTCCACTTTAGGATTA  986

seq1: chr8_103974210_103975456
seq2: B6Ng01-114F08.g_68_1277 (reverse)

seq1  AAAATCAA-GAATGACCACGTGACAAAGGTCCAGTTCTATAATCATCCCC  49
      |||||||| ||||||||   ||   |||||||||||||   ||  || | 
seq2  AAAATCAAGGAATGACC---TGCACAAGGTCCAGTTCTTATATACTCTC-  46

seq1  ATTGTTTGAGTCTCTCTGGCCACATTAGTTCTAATAATCCTGGCCAAGAA  99
        |||   ||||||    | |||| |||||||||| || |||    ||||
seq2  -ATGT---AGTCTC----GGCACA-TAGTTCTAAT-ATTCTG---CAGAA  83

seq1  AATTGGAGAAAAAGGCAGCATGGTTTATTTAGATGGTAGGTATTTGAGTT  149
         ||   ||||||||||||||||   | |||||     |||  |||| |
seq2  ---TG--AAAAAAGGCAGCATGGT---TATAGAT-----GTAGATGAGGT  120

seq1  CCAGTTTACTGATTCAGAACT-CTGTCACTTCCTAATATTTTGTCTAGAT  198
       ||| |||||||| ||||||| ||||||||  |||||| |||||||||| 
seq2  -CAG-TTACTGATCCAGAACTCCTGTCACT--CTAATA-TTTGTCTAGA-  164

seq1  TATTTTAATTATTATATAGATAAGGTGACCCTAGGCAGAATTAGTGGTGT  248
      ||||||||| |||||||||||||||||| |||||||||||||||||||| 
seq2  TATTTTAATAATTATATAGATAAGGTGA-CCTAGGCAGAATTAGTGGTG-  212

seq1  TTTTAACAAAGTAACCACTGTTTAGCTGA-GTGGTTATTAATTGAATTAT  297
      ||||||||||||||||||||||||||||| ||||||| ||||||||||||
seq2  TTTTAACAAAGTAACCACTGTTTAGCTGAGGTGGTTA-TAATTGAATTAT  261

seq1  ATTTAGTCAACAAAGTTAAACACTAACCAAGTGTGTCAGAACTGTGCTAG  347
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATTTAGTCAACAAAGTTAAACACTAACCAAGTGTGTCAG-ACTGTGCTAG  310

seq1  GGACTGAAATCAATATATCACTATAAACATATGATAACTGAACTAGTATA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGAAATCAATATATCACTATAAACATATGATAACTGAACTAGTATA  360

seq1  AAGGTGCTTTTGGCGTGGAGCCAGTGTAGAAATATAAAAATAAAATGCCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGCTTTTGGCGTGGAGCCAGTGTAGAAATATAAAAATAAAATGCCT  410

seq1  AATGAGTAGTCATAATTATTAGAGCTTGGATGTGTAAGTATATCCAAATA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTAGTCATAATTATTAGAGCTTGGATGTGTAAGTATATCCAAATA  460

seq1  AAAAGGAACAAAATTCATAAGATTAAAAAAAAAGAAGCCTCAAAGTAGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAACAAAATTCATAAGATTAAAAAAAAAGAAGCCTCAAAGTAGAA  510

seq1  GCATTATCTATATATAAATAAAAAAGATGAAAATAAACAATAAAACAAAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTATCTATATATAAATAAAAAAGATGAAAATAAACAATAAAACAAAC  560

seq1  AAAAATCAAAGAAAAAGCAAAGAAAACATATTTATGTTCCCTATCAGCAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCAAAGAAAAAGCAAAGAAAACATATTTATGTTCCCTATCAGCAT  610

seq1  CACAGTATCCAGTTGATGGTTTTCCACTTCCAGCTTTCTGTTTCCTCCTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTATCCAGTTGATGGTTTTCCACTTCCAGCTTTCTGTTTCCTCCTC  660

seq1  AGCAAAAATCAATAAATCATACACTAGAGTTTGAATATTCTTGCATTAGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAATCAATAAATCATACACTAGAGTTTGAATATTCTTGCATTAGA  710

seq1  AGAAAAAAATCTATGCTGCAGTTATTTATTAGAAGGGGCAGTACAATCAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAATCTATGCTGCAGTTATTTATTAGAAGGGGCAGTACAATCAG  760

seq1  TGGAATCAGTAGTGGTCGGGCAGAAGCATACTGAAGCACCAGTGAATTTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATCAGTAGTGGTCGGGCAGAAGCATACTGAAGCACCAGTGAATTTA  810

seq1  TTCTTTATTTTTCTTCAATTTGACCTTTGATTATACTGTATAATTTTGTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTATTTTTCTTCAATTTGACCTTTGATTATACTGTATAATTTTGTG  860

seq1  TCTGTGTATAGAATATGAATCTGCAGTGTGAGATTTGTATTGTATTTTAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTATAGAATATGAATCTGCAGTGTGAGATTTGTATTGTATTTTAT  910

seq1  ATAACTTGGGAGCTTTTTTTCTAAATCTCAATCTATGAGAATGAACGGTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTGGGAGCTTTTTTTCTAAATCTCAATCTATGAGAATGAACGGTA  960

seq1  GAATTGTAGATATCTATATTCCTGATATTGTTTACTGAAAAAACCTTTGT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGTAGATATCTATATTCCTGATATTGTTTACTGAAAAAACCTTTGT  1010

seq1  TTCATTTCGCTGTACCTTGGGCTAGAGATACAAATTTCCACATTAAAAAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTCGCTGTACCTTGGGCTAGAGATACAAATTTCCACATTAAAAAA  1060

seq1  AAAAAAAAAACAAAACAAAAAATAGATCAGGAATAACCTACAAATGAGAT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAACAAAACAAAAAATAGATCAGGAATAACCTACAAATGAGAT  1110

seq1  TCCTTAGAGCCCTATCTAAAATGTTCTTTACTTTTTCTCTAAATTCATCT  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGAGCCCTATCTAAAATGTTCTTTACTTTTTCTCTAAATTCATCT  1160

seq1  TTAGTGATGCTCTTTTAAAAAATATAAGTATCCAAAATGGAATGGAATTC  1247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGATGCTCTTTTAAAAAATATAAGTATCCAAAATGGAATGGAATTC  1210