BAC Information

Click to search

BAC

Clone NameB6Ng01-114O24
Chromosome8 (Build37)
Map Location 103,710,173 - 103,711,304
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042086, LOC100042092, LOC384895
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114O24.bB6Ng01-114O24.g
ACCDH920330DH920331
length1,1071,124
definitionDH920330|Mus musculus domesticus DNA, BAC clone: B6Ng01-114O24, 5' end.DH920331|Mus musculus domesticus DNA, BAC clone: B6Ng01-114O24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaacactgaatggctgagaagcacctcaagaaatg
ttgatcatcctgagtcatcagcgaaatgcaaatcaaaacaacactgagat
tctagctcacaccagacataacggctaaggtcaaaaactcaggtgaacag
cagatgttggaaaggatgtggagaaagaggaacacttcttcattgctcat
tgctggtagaattacaagcttgtactaccactcttgaaatcagttaggct
gttcctcagaaagttgaacatagttctactggaagacccagcaataccac
tctttggcatatacccagaagatgctctaacttgtaaaaacgacacatgc
tcctctattttcatagcagccttacatataatagcaaaaagctgggaaaa
aaaaacagatatccctcaacagaggaatggatatagaaaatgtggtacat
ttacacaatggagtactatgcacctattaaaaacaattaatttatgaaat
tcttaggcaaatagatgaatctggtccatatcttcctgagtgaggtagct
tagtcatgaaagaatacacctgatatgcacttacttataagtggatattg
gtccagaatctctcaatatccaagatacaattcacaaaacacatgaaact
caaaaagaaggatacctcaatccttcttagaagggggaacaaaataccca
tcgaaggagttacaaagtgtgaaacagagattgaagggatcactatccaa
agtctgcccgacctgggagccaactgatatacaaccaccaaacccagaca
ctcgtggattaaaagagcttgttgtcaagagcctgatatagctgtcttct
gagatgctctgtcagtgcctcacaaatacagaagtggatgtttacagcta
tccattgaaatgtgcacaggatccccattgaggaggtagagaaatgactg
aagagatgaatgtttccggccctgtagagaacaacagtatgaactaccag
tacctacagagctcctggactaaccaccaaccaagaaaacacatagtaga
ctcatggctctagctgcatatgtttgcagaggattggcccttagtttgga
tcactca
gaattcataaaaatacattttaaaaataaggaactactgatgcatgagac
acattggataaatgctagaaacttgctgaaagtttttaaataaaaacata
aatacttacaatctaggtctatggaattgtgaatagtatgaggataggaa
cacctcatggtaaagtgacattctgagttgcgccttcattgactcaggag
tgatgagagaaataatactgaaatgtatctgcactatgtagaatcatgca
acgtaagaatttgagaaagatgatgcatttccagatggcagctatgcatt
gtctttctattcttgaaatatataggcaaattccagagtgagttctcgct
tgtctataaattagagagtcatgagcattaaatgagaaatataactatgg
gagtggatgagatcacccatttggagatatttgaaataggaaagaaacta
cctgggaacacttataaccataggtatttatggaatagacagaggaagcc
cattctctgaagaaggcacagaaagtttaaagagtaatgaagaaaaaaaa
aagataaatcactaaagtcaacagaatagagacctttcagaaaggcagca
tcaatggcaccaaatgcaagcttagcataagtgtccatttaaattgaaac
acctttattagatttggcactgaaaattggcattggctggggtcaaggaa
aaaaaaacatgaacttaaacttggatatttacatatatgttcaatcactt
gctagctgctgtgcagcacatgataaatcactttacacccttaccccatg
aatttatacaccctattttcaaagaagatgataatgttcaggttttaaga
ggtattcaataatatacattaaacattacttacatatgacatgtatcctt
tttgtatgctctttaatgaagtagtctattttgtggacgttcaaacttac
ataaacataagtattacttttagcaacattggttaattgcttcagtagca
ataatattacccactctttgtttttactaattaggtatctatctatgtac
atatgcagcctcagttgcttggtatatatgtttcagtcattcatgatgct
atctaattaatgccttgggaatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_103710173_103711304
seq2: B6Ng01-114O24.g_69_1192

seq1  GAATTCATAAAAATACATTTTAAAAATAAGGAACTACTGATGCATGAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAAAATACATTTTAAAAATAAGGAACTACTGATGCATGAGAC  50

seq1  ACATTGGATAAATGCTAGAAACTTGCTGAAAGTTTTTAAATAAAAACATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGGATAAATGCTAGAAACTTGCTGAAAGTTTTTAAATAAAAACATA  100

seq1  AATACTTACAATCTAGGTCTATGGAATTGTGAATAGTATGAGGATAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTACAATCTAGGTCTATGGAATTGTGAATAGTATGAGGATAGGAA  150

seq1  CACCTCATGGTAAAGTGACATTCTGAGTTGCGCCTTCATTGACTCAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCATGGTAAAGTGACATTCTGAGTTGCGCCTTCATTGACTCAGGAG  200

seq1  TGATGAGAGAAATAATACTGAAATGTATCTGCACTATGTAGAATCATGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAGAGAAATAATACTGAAATGTATCTGCACTATGTAGAATCATGCA  250

seq1  ACGTAAGAATTTGAGAAAGATGATGCATTTCCAGATGGCAGCTATGCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTAAGAATTTGAGAAAGATGATGCATTTCCAGATGGCAGCTATGCATT  300

seq1  GTCTTTCTATTCTTGAAATATATAGGCAAATTCCAGAGTGAGTTCTCGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTCTATTCTTGAAATATATAGGCAAATTCCAGAGTGAGTTCTCGCT  350

seq1  TGTCTATAAATTAGAGAGTCATGAGCATTAAATGAGAAATATAACTATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATAAATTAGAGAGTCATGAGCATTAAATGAGAAATATAACTATGG  400

seq1  GAGTGGATGAGATCACCCATTTGGAGATATTTGAAATAGGAAAGAAACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGATGAGATCACCCATTTGGAGATATTTGAAATAGGAAAGAAACTA  450

seq1  CCTGGGAACACTTATAACCATAGGTATTTATGGAATAGACAGAGGAAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGAACACTTATAACCATAGGTATTTATGGAATAGACAGAGGAAGCC  500

seq1  CATTCTCTGAAGAAGGCACAGAAAGTTTAAAGAGTAATGAAGAAAAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCTGAAGAAGGCACAGAAAGTTTAAAGAGTAATGAAGAAAAAAAA  550

seq1  AAGATAAATCACTAAAGTCAACAGAATAGAGACCTTTCAGAAAGGCAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAAATCACTAAAGTCAACAGAATAGAGACCTTTCAGAAAGGCAGCA  600

seq1  TCAATGGCACCAAATGCAAGCTTAGCATAAGTGTCCATTTAAATTGAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGCACCAAATGCAAGCTTAGCATAAGTGTCCATTTAAATTGAAAC  650

seq1  ACCTTTATTAGATTTGGCACTGAAAATTGGCATTGGCTGGGGTCAAGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTATTAGATTTGGCACTGAAAATTGGCATTGGCTGGGGTCAAGGAA  700

seq1  AAAAAAACATGAACTTAAACTTGGATATTTACATATATGTTCAATCACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACATGAACTTAAACTTGGATATTTACATATATGTTCAATCACTT  750

seq1  GCTAGCTGCTGTGCAGCACATGATAAATCACTTTACACCCTTACCCCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCTGCTGTGCAGCACATGATAAATCACTTTACACCCTTACCCCATG  800

seq1  AATTTATACACCCTATTTTCAAAGAAGATGATAATGTTCAGGTTTTAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATACACCCTATTTTCAAAGAAGATGATAATGTTCAGGTTTTAAGA  850

seq1  GGTATTCAATAATATACATTAAACATTACTTACATATGACATGTATCC-T  899
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GGTATTCAATAATATACATTAAACATTACTTACATATGACATGTATCCTT  900

seq1  TTTGTATGCTCTTTAATGAAGTAGTCTATTTTGTGGACGTTCAAAACTTA  949
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTTGTATGCTCTTTAATGAAGTAGTCTATTTTGTGGACGTTC-AAACTTA  949

seq1  CATAAACATAAGTATTACTTTTAGCAACATTGGTTAATTGCTTCAGTAGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAACATAAGTATTACTTTTAGCAACATTGGTTAATTGCTTCAGTAGC  999

seq1  AATAATATTACCCACTCTTTGTTTTTACTAAATTAAGTTTATTTTCTTAT  1049
      ||||||||||||||||||||||||||||| ||||| || |       |||
seq2  AATAATATTACCCACTCTTTGTTTTTACT-AATTAGGTAT------CTAT  1042

seq1  CTATGTACATATGCAGCCTCAGTTTGCTGTGTATATATG-TTCAGTCATT  1098
      |||||||||||||||||||||| |||||  ||||||||| ||||||||||
seq2  CTATGTACATATGCAGCCTCAG-TTGCTTGGTATATATGTTTCAGTCATT  1091

seq1  CATGGTATGCTATCATATT-ATGCCTTGAGAATGC  1132
      ||||  ||||||||  ||| |||||||| ||||||
seq2  CATG--ATGCTATCTAATTAATGCCTTGGGAATGC  1124