BAC Information

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BAC

Clone NameB6Ng01-115D12
Chromosome8 (Build37)
Map Location 59,220,820 - 59,222,014
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC664916, Adam29, Glra3, LOC664812, Hpgd, LOC664948, BC088983, Fbxo8, LOC100040431, EG624433
Downstream geneLOC654355, LOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115D12.bB6Ng01-115D12.g
ACCDH920540DH920541
length1,1761,165
definitionDH920540|Mus musculus domesticus DNA, BAC clone: B6Ng01-115D12, 5' end.DH920541|Mus musculus domesticus DNA, BAC clone: B6Ng01-115D12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccataggagcgaccactcactggcacacaagaatatcagtaagtg
ataggactataaaaacacattccttactacctaactgaactagcgaacac
caaggacagaatctcacagaagcagtagcaaatgccttccaggtttttat
tctgagcaggcactattggaatgaagtgaagcaaagatttgtgcctcact
gtttattatgcaaataatgatagtgataataataataataatcagcaata
gttggagtttgttcctttagatgagacaattaggcagagacttattagaa
aatatgctgatccattgtctgttttaaagaaagcaaagacgtcgaattat
ttgctaatgtgcactgagggagtcatactcacaaataaggcatggcagtg
ttacagaattctggttcaaatgtacatttcacctaatggtctaagaagga
actggaggattttcttcacatggccttttcttagcaaacatgtggtttgg
cttccataatatatctacttaaaagaaacttggaactagaagctagaagg
actttaatctggaagtgaagatcctataaaagatgctttctactttgcat
actttcagtattagcttcaagaagaaaccagaagaaagcctctaattaga
ggaccttgattgggtctaaaatgtggacacaatgggatatgttggaattt
ttattactattatggtaaagaggcattgatggggtgatgcataaccagga
gaaacatggatagtatgtccagtagccctgacccaccatcaccccatcca
gtagctagcaggaacatttcctttatatactaccgctgcaggaacaggag
gtttccattgtagactatgtaagagaaggccatagcatagaatgaagtag
aatagaagtttttagcaaacaaaatcacagaggtttagtggctattagtg
atggattgcattgaaacagaaaggaagaaacaaagacatacattgatttt
ttcttaagcaaatgagtggctgctgctaaggctagcaagagagggtttga
atttactcatgacattcttcaagttagtacttatgaggacagtatattca
gagaggattcattttagaaaacaatttcacaaggataaattcagatctgt
gaatggccgataaaactgatgctttg
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggctaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctc
agagaattggacatagtactaccggaggatccagcaatacctttcctggg
catatatccagaagatgccccaactggtaagaaggacacatgctccacta
tgttcatagcagccttgtttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagataatgtggtacatttacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctaggca
aatggatggacctggaaggcatcatcctgagtgaggtaaccaaatcacaa
aggaactcacacaatatgtactcactgataagtggatattagctgagaaa
cttaggatacccaagatataagatacaatttgctaaacgcatgaaactca
agaagaaagaagaccaaagtgtggacactttgccccttcctagaaatggg
aacaaaacacccatggaaggagttacagagacaaaatttggagctgtgac
gaaaggatggaccatctagtgattgccatatccagggatccatcccataa
tcagcctccaaatgctgacaccattgcatacactagcaagattttgctat
aaggacccagatatagctgtctcttgtgagactatgccagggcctagcaa
acacagaagtggatgctcacagtcagctattggatcggtcacacggctcc
caatggagagctagagctagaagaaagtaccaaaggagctaaagggactg
caccctatatgtgacaacaatatgactaacagtaccccggagctcttgtc
tctagctgcatatgtatcaaagatgctagtcagcatcactgaaggaagcc
cgtgacttgcaacttatatgcccagtacggacaccaagtaaaagggatgg
gtgtgataagggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_59220820_59222014
seq2: B6Ng01-115D12.b_44_1219 (reverse)

seq1  CAAAGCATCAGTTTTTATCTGTGCCATCTACAGATTCTGAAATTTTATCT  50
      ||||||||||| |||||||   |||||  ||||| ||||||  |||||| 
seq2  CAAAGCATCAG-TTTTATC--GGCCATTCACAGA-TCTGAA--TTTATCC  44

seq1  TTGTTGATATTTGTTTTCTAAAAATGGAATTCCTCTTCCTG-ATATACTG  99
      ||| ||| | ||||||||| ||||||  | ||||||  ||| ||||||||
seq2  TTG-TGA-AATTGTTTTCT-AAAATG--AATCCTCT--CTGAATATACTG  87

seq1  T-CTCATAGGTACTTAAACTTGGAGGAATGTCATGAGTAAATTCAAACCC  148
      | |||||| |||||  ||||| || |||||||||||||||||||||||||
seq2  TCCTCATAAGTACT--AACTT-GAAGAATGTCATGAGTAAATTCAAACCC  134

seq1  TCTCTTTGCTTAGCCTTAGCAGCAGCCACTCATTTGCTTAAG-AAAAATC  197
      |||| |||| |||||||||||||||||||||||||||||||| |||||||
seq2  TCTC-TTGC-TAGCCTTAGCAGCAGCCACTCATTTGCTTAAGAAAAAATC  182

seq1  AATGTATTGTCTTTGTTTCTTCCTTTCTGTTTTCAATGCAATCCATCACT  247
      |||||| |||||||||||||||||||||| ||||||||||||||||||||
seq2  AATGTA-TGTCTTTGTTTCTTCCTTTCTG-TTTCAATGCAATCCATCACT  230

seq1  AATAGCCACTAAACCTCTGTGATTTTTGTTTGCTAAAAAACTTCTATTCT  297
      |||||||||||||||||||||| ||||||||||| |||||||||||||||
seq2  AATAGCCACTAAACCTCTGTGA-TTTTGTTTGCT-AAAAACTTCTATTCT  278

seq1  ACTTCATTCTATGCTATGGCCTTCTCTTACATAGTCTACAATGGAAACCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCATTCTATGCTATGGCCTTCTCTTACATAGTCTACAATGGAAACCT  328

seq1  CCTGTTCCTGCAGCGGTAGTATATAAAGGAAATGTTCCTGCTAGCTACTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTCCTGCAGCGGTAGTATATAAAGGAAATGTTCCTGCTAGCTACTG  378

seq1  GATGGGGTGATGGTGGGTCAGGGCTACTGGACATACTATCCATGTTTCTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGGTGATGGTGGGTCAGGGCTACTGGACATACTATCCATGTTTCTC  428

seq1  CTGGTTATGCATCACCCCATCAATGCCTCTTTACCATAATAGTAATAAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTATGCATCACCCCATCAATGCCTCTTTACCATAATAGTAATAAAA  478

seq1  ATTCCAACATATCCCATTGTGTCCACATTTTAGACCCAATCAAGGTCCTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAACATATCCCATTGTGTCCACATTTTAGACCCAATCAAGGTCCTC  528

seq1  TAATTAGAGGCTTTCTTCTGGTTTCTTCTTGAAGCTAATACTGAAAGTAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAGAGGCTTTCTTCTGGTTTCTTCTTGAAGCTAATACTGAAAGTAT  578

seq1  GCAAAGTAGAAAGCATCTTTTATAGGATCTTCACTTCCAGATTAAAGTCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGTAGAAAGCATCTTTTATAGGATCTTCACTTCCAGATTAAAGTCC  628

seq1  TTCTAGCTTCTAGTTCCAAGTTTCTTTTAAGTAGATATATTATGGAAGCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGCTTCTAGTTCCAAGTTTCTTTTAAGTAGATATATTATGGAAGCC  678

seq1  AAACCACATGTTTGCTAAGAAAAGGCCATGTGAAGAAAATCCTCCAGTTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACATGTTTGCTAAGAAAAGGCCATGTGAAGAAAATCCTCCAGTTC  728

seq1  CTTCTTAGACCATTAGGTGAAATGTACATTTGAACCAGAATTCTGTAACA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTAGACCATTAGGTGAAATGTACATTTGAACCAGAATTCTGTAACA  778

seq1  CTGCCATGCCTTATTTGTGAGTATGACTCCCTCAGTGCACATTAGCAAAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATGCCTTATTTGTGAGTATGACTCCCTCAGTGCACATTAGCAAAT  828

seq1  AATTCGACGTCTTTGCTTTCTTTAAAACAGACAATGGATCAGCATATTTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCGACGTCTTTGCTTTCTTTAAAACAGACAATGGATCAGCATATTTT  878

seq1  CTAATAAGTCTCTGCCTAATTGTCTCATCTAAAGGAACAAACTCCAACTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAAGTCTCTGCCTAATTGTCTCATCTAAAGGAACAAACTCCAACTA  928

seq1  TTGCTGATTATTATTATTATTATCACTATCATTATTTGCATAATAAACAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGATTATTATTATTATTATCACTATCATTATTTGCATAATAAACAG  978

seq1  TGAGGCACAAATCTTTGCTTCACTTCATTCCAATAGTGCCTGCTCAGAAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCACAAATCTTTGCTTCACTTCATTCCAATAGTGCCTGCTCAGAAT  1028

seq1  AAAAACCTGGAAGGCATTTGCTACTGCTTCTGTGAGATTCTGTCCTTGGT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCTGGAAGGCATTTGCTACTGCTTCTGTGAGATTCTGTCCTTGGT  1078

seq1  GTTCGCTAGTTCAGTTAGGTAGTAAGGAATGTGTTTTTATAGTCCTATCA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGCTAGTTCAGTTAGGTAGTAAGGAATGTGTTTTTATAGTCCTATCA  1128

seq1  CTTACTGATATTCTTGTGTGCCAGTGAGTGGTCGCTCCTATGGAATTC  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTGATATTCTTGTGTGCCAGTGAGTGGTCGCTCCTATGGAATTC  1176