BAC Information

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BAC

Clone NameB6Ng01-115I22
Chromosome8 (Build37)
Map Location 59,004,588 - 59,102,230
singlet/doubletdoublet
Overlap geneBC088983, Fbxo8, LOC100040431
Upstream geneEG664876, LOC100040356, LOC664916, Adam29, Glra3, LOC664812, Hpgd, LOC664948
Downstream geneEG624433, LOC654355, LOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115I22.bB6Ng01-115I22.g
ACCDH920789DH920790
length954796
definitionDH920789|Mus musculus domesticus DNA, BAC clone: B6Ng01-115I22, 5' end.DH920790|Mus musculus domesticus DNA, BAC clone: B6Ng01-115I22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,004,588 - 59,005,281)(59,101,436 - 59,102,230)
sequence
gaattcacttgttaataatgtatggatgaggggcttacctttgaatagca
tttcaagggggtaggagagctgatgagccaccagctttactgactccact
gtagttcaaactaatggttttaaataactacagtatgattactctattaa
ataaatacagtaagtattacagttcattaagaaaaattcctgcctctctc
ccacccctgtgtctccaagaggatgtcctcattcccagacacaccccaaa
ctcccaccctcataccctgctaggtctcaacattccctgggacctcaagt
ctctcaagggttaggtaaatcttctgtcattgaggccagatacagcagtc
ctctgctgtatatgtgtctccggcctcggaccaactagtgtatgctgcct
ggttggtggctcagtgcttgagagatctctggggtccagctttgttgaga
tgaatggtcttcctatgaggttgccctccttcttccagcctttccctaat
tcaaccacaggggaccatgacttcagactaatggttgggtgtatctgctt
ctgtctcagtcagctgctggttggacctctcagagggcagccatgctagg
ctcttgtctgtaagtacatcatgtcatcactaatagtgttaggcctgggg
aactccccttgagatggatcccaatttgggcctgtcactgaacctccttt
ccctcagtattttctcctttttttttttttcctttgtccctgcagtcctt
ttagacaggaacaattctgggtcagactgtggaatggcagcccagtccgt
cccttcacttgatgtcctgtctttctgctggaggtagactctacaagttc
tacaagttccctctccccactgttggacatgtcatctaagtccctccatt
agagtcccgagagtctcttacctctcagatctctggtacattctagaggg
tcct
gaattcctctctatttcagaggtgtaattccccacctcgcttacttcctg
gcctaacgcccctcatcaggtggccttggggccactgcaaaactcgctcc
agcagagtccagagcctctttctgagttctgtggaagttgtttggaccaa
actagaaaatcctgttgtgtctaactccagcaggtcacctccagaatgct
gggatctcgaaagagagtgtcagtattgttgggcagctcaaacaagttca
aagaactacctcttcacttaatctcctccagcaacagtttgaaaattcag
agtgcccgggacgggaagagcgggtaaggcagagccaaggagaatggggg
tgggggtggcgatcaagggagaaagaagtacctggggaccgggaagagaa
gtagggctccaagctttgattttaaaactcagtgaaccagggtagcttga
cactccaccccctgcctatgtctcagcttgatcctggagctagttagaga
gttaaacgggcacgcgggtggggcaattcattaggcaagaaatggattag
ttgtttactatctataaacattccaaccacagcaacggatcataaaaccg
cggaagggcctgtaaaagggaggagcgaggaagcgtccatgtgggccgcg
cggacttagggattgttcccgagtgataaagtgtccattagagagggaga
ggcagggaaggggaaatgatttcccttgtcacgatttctccaagcttcat
gggggcagacagcgttggggtgagttggaaggagatggagagagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_59004588_59005281
seq2: B6Ng01-115I22.b_49_742

seq1  GAATTCACTTGTTAATAATGTATGGATGAGGGGCTTACCTTTGAATAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGTTAATAATGTATGGATGAGGGGCTTACCTTTGAATAGCA  50

seq1  TTTCAAGGGGGTAGGAGAGCTGATGAGCCACCAGCTTTACTGACTCCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGGGGGTAGGAGAGCTGATGAGCCACCAGCTTTACTGACTCCACT  100

seq1  GTAGTTCAAACTAATGGTTTTAAATAACTACAGTATGATTACTCTATTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTCAAACTAATGGTTTTAAATAACTACAGTATGATTACTCTATTAA  150

seq1  ATAAATACAGTAAGTATTACAGTTCATTAAGAAAAATTCCTGCCTCTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATACAGTAAGTATTACAGTTCATTAAGAAAAATTCCTGCCTCTCTC  200

seq1  CCACCCCTGTGTCTCCAAGAGGATGTCCTCATTCCCAGACACACCCCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCTGTGTCTCCAAGAGGATGTCCTCATTCCCAGACACACCCCAAA  250

seq1  CTCCCACCCTCATACCCTGCTAGGTCTCAACATTCCCTGGGACCTCAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACCCTCATACCCTGCTAGGTCTCAACATTCCCTGGGACCTCAAGT  300

seq1  CTCTCAAGGGTTAGGTAAATCTTCTGTCATTGAGGCCAGATACAGCAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAAGGGTTAGGTAAATCTTCTGTCATTGAGGCCAGATACAGCAGTC  350

seq1  CTCTGCTGTATATGTGTCTCCGGCCTCGGACCAACTAGTGTATGCTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTGTATATGTGTCTCCGGCCTCGGACCAACTAGTGTATGCTGCCT  400

seq1  GGTTGGTGGCTCAGTGCTTGAGAGATCTCTGGGGTCCAGCTTTGTTGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGTGGCTCAGTGCTTGAGAGATCTCTGGGGTCCAGCTTTGTTGAGA  450

seq1  TGAATGGTCTTCCTATGAGGTTGCCCTCCTTCTTCCAGCCTTTCCCTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGGTCTTCCTATGAGGTTGCCCTCCTTCTTCCAGCCTTTCCCTAAT  500

seq1  TCAACCACAGGGGACCATGACTTCAGACTAATGGTTGGGTGTATCTGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCACAGGGGACCATGACTTCAGACTAATGGTTGGGTGTATCTGCTT  550

seq1  CTGTCTCAGTCAGCTGCTGGTTGGACCTCTCAGAGGGCAGCCATGCTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCAGTCAGCTGCTGGTTGGACCTCTCAGAGGGCAGCCATGCTAGG  600

seq1  CTCTTGTCTGTAAGTACATCATGTCATCACTAATAGTGTTAGGCCTGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTCTGTAAGTACATCATGTCATCACTAATAGTGTTAGGCCTGGGG  650

seq1  AACTCCCCTTGAGATGGATCCCAATTTGGGCCTGTCACTGAACC  694
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCCCTTGAGATGGATCCCAATTTGGGCCTGTCACTGAACC  694

seq1: chr8_59101436_59102230
seq2: B6Ng01-115I22.g_64_859 (reverse)

seq1  TTCTCTCTCCATCTCCTTCCAACTCACCCCAACGCTGTCTGCCCCCATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTCCATCTCCTTCCAACTCACCCCAACGCTGTCTGCCCCCATGA  50

seq1  AGCTTGGAGAAATCGTGACAA-GGAAATCATTTCCCCTTCCCTGCCTCTC  99
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGCTTGGAGAAATCGTGACAAGGGAAATCATTTCCCCTTCCCTGCCTCTC  100

seq1  CCTCTCTAATGGACACTTTATCACTCGGGAACAATCCCTAAGTCCGCGCG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTAATGGACACTTTATCACTCGGGAACAATCCCTAAGTCCGCGCG  150

seq1  GCCCACATGGACGCTTCCTCGCTCCTCCCTTTTACAGGCCCTTCCGCGGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACATGGACGCTTCCTCGCTCCTCCCTTTTACAGGCCCTTCCGCGGT  200

seq1  TTTATGATCCGTTGCTGTGGTTGGAATGTTTATAGATAGTAAACAACTAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGATCCGTTGCTGTGGTTGGAATGTTTATAGATAGTAAACAACTAA  250

seq1  TCCATTTCTTGCCTAATGAATTGCCCCACCCGCGTGCCCGTTTAACTCTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTCTTGCCTAATGAATTGCCCCACCCGCGTGCCCGTTTAACTCTC  300

seq1  TAACTAGCTCCAGGATCAAGCTGAGACATAGGCAGGGGGTGGAGTGTCAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAGCTCCAGGATCAAGCTGAGACATAGGCAGGGGGTGGAGTGTCAA  350

seq1  GCTACCCTGGTTCACTGAGTTTTAAAATCAAAGCTTGGAGCCCTACTTCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCCTGGTTCACTGAGTTTTAAAATCAAAGCTTGGAGCCCTACTTCT  400

seq1  CTTCCCGGTCCCCAGGTACTTCTTTCTCCCTTGATCGCCACCCCCACCCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCGGTCCCCAGGTACTTCTTTCTCCCTTGATCGCCACCCCCACCCC  450

seq1  CATTCTCCTTGGCTCTGCCTTACCCGCTCTTCCCGTCCCGGGCACTCTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCCTTGGCTCTGCCTTACCCGCTCTTCCCGTCCCGGGCACTCTGA  500

seq1  ATTTTCAAACTGTTGCTGGAGGAGATTAAGTGAAGAGGTAGTTCTTTGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAAACTGTTGCTGGAGGAGATTAAGTGAAGAGGTAGTTCTTTGAA  550

seq1  CTTGTTTGAGCTGCCCAACAATACTGACACTCTCTTTCGAGATCCCAGCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTGAGCTGCCCAACAATACTGACACTCTCTTTCGAGATCCCAGCA  600

seq1  TTCTGGAGGTGACCTGCTGGAGTTAGACACAACAGGATTTTCTAGTTTGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGGTGACCTGCTGGAGTTAGACACAACAGGATTTTCTAGTTTGG  650

seq1  TCCAAACAACTTCCACAGAACTCAGAAAGAGGCTCTGGACTCTGCTGGAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAACAACTTCCACAGAACTCAGAAAGAGGCTCTGGACTCTGCTGGAG  700

seq1  CGAGTTTTGCAGTGGCCCCAAGGCCACCTGATGAGGGGCGTTAGGCCAGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTTTTGCAGTGGCCCCAAGGCCACCTGATGAGGGGCGTTAGGCCAGG  750

seq1  AAGTAAGCGAGGTGGGGAATTACACCTCTGAAATAGAGAGGAATTC  795
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGCGAGGTGGGGAATTACACCTCTGAAATAGAGAGGAATTC  796