BAC Information

Click to search

BAC

Clone NameB6Ng01-115J21
Chromosome8 (Build37)
Map Location 31,236,665 - 31,237,774
singlet/doubletsinglet
Overlap genenone
Upstream geneUnc5d, LOC100041237
Downstream geneEG628189, LOC547008, Dusp26, Rnf122
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115J21.bB6Ng01-115J21.g
ACCDH920835DH920836
length1,0901,183
definitionDH920835|Mus musculus domesticus DNA, BAC clone: B6Ng01-115J21, 5' end.DH920836|Mus musculus domesticus DNA, BAC clone: B6Ng01-115J21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaccctcaaatgaactttattatcgaagtagaagtctctactg
tgatatctgaaattgattcacatggaaaaaaatgaggcagtgtgttttct
ctctctctctgaaaagaggtattcttaaggacaccacctcaggaaaggcc
attcagaatgtctgttggtaaagctaagctggaatgctagcactgatctg
ggagctgttcagacatgactcagttacattgtatttacaatcttggagtg
gcctatgtatttctactttcaaaattttcccagtcctagaacttttctgt
taattttgtgctccaggtaataaaggctctgattaatccttatattatta
ttaattattattattttttcagaagagctcgtaaatatacaattttgtca
agctagattttaaccttttcccttttttaacctgaaaccctgaaacataa
ccagcccagtgaacatgaaagttctcaaaacctgtgaatcatcaaagaaa
tgccatcctgcacaaggaaaacctaaagcaaatctttgtcctcatttcag
gcatgaatttcttagcacaggaaactgttttgctctttctgttagtcatt
ttaccactcctgtgataaaagcagcatgaacaaagtaagttaaagagtga
agagggtttttgagtccacagttctagctggataagaatccatcatggct
gggaagttaggcaggtagtgcatagctgtaaatcacatagaggctgagct
aaagctgagagaacatatcttgaacctcaactatgaagcagagagatgaa
actagaaaaggcacaagggcttgaaactctcaaagccttcctccagtaat
gttcttcctcccacaaggctgtgcttctcaaaccttccaaagagtaccaa
caactgagtactaagtgttcacgataagacctatggggaacgtctcattc
aaacatcttgctggatccagagttcaagctatacctttctgtgtcagctc
atctctgtagatctttatatgatccatcttcacaatttataacaaatgtc
atcagagcagactttctagtatcccaccaggagtcagtca
gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgcggagtccccgccctgcgtagtgcgtcagca
atgcgcagagagatgcgcagagaggcaatgcgcagagagatgcgcagaga
ggcaatgcgcagagagatgcgcagagaggcaatgcgcagagaggcaatgc
gcagagaggcagtgcgcagagaggcagtgcgcagagaggcagtgcgcaga
ctcattcattcccagagaggaacaaaggaaaatacaacaggcatttccag
tctttgaaggagccgagggtgggcgtgtccacgctccggtagaatacgta
cagattaaagaactcgccgagtcggtccgtaaatatggaaccaatgctaa
ttttaccttggtgcagttagacaggctcgccggcatggcactaactcctg
ctgactggcaaatgattgtaaaagccgctctccctagtatgggcaaatat
atggaatggagagctctttggcatgaaactgcacaagcgcaggcccgagc
aaacgcagctgctttgactccagagcagagagattggacttttgacttgt
taatgggtcagggagcttattctgctgatcagacaaactaccattgggga
gtttatgcccagatttcttccacggctattagggcctggaaggcgctctc
ccgagcaggtgaaaccactgggcagttaacaaagataatccagggacctc
aggaatccttctcagattttgtggccagaatgacagaggcagcagagcgt
atttttggagagtcagagcagctgcgcctctgatagacagctcatctatg
agcaagcacaaagagtgccgagcgcatagccccagaaagaacaaagctta
cagactggctcagtctgtcgagagctgggacctctcacatgcagcttagc
gccgcatcctccattctcagaaccgcctcatgagcagaaatgatcgagac
tgttttactgcggaagcctggcattttagaaggattgccactcggattac
agggagaaactctctctacctctttcggcatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_31236665_31237774
seq2: B6Ng01-115J21.b_48_1137 (reverse)

seq1  TGACTGACTCCTGGTGGG-TACTAGAAAGTCTGCTCTGGAATGACATTTT  49
      |||||||||||||||||| |||||||||||||||||||  |||||| |||
seq2  TGACTGACTCCTGGTGGGATACTAGAAAGTCTGCTCTG--ATGACA-TTT  47

seq1  GTTATAAAATTGTGAAAGATGGGATCATATTAAAGATTCTTACAGAGATT  99
      ||||| |||||||| ||||| |||||||| |||||||   |||||||| |
seq2  GTTAT-AAATTGTG-AAGAT-GGATCATA-TAAAGAT--CTACAGAGA-T  90

seq1  GAGCTTAAACACAGAAAAGAAATATAAGCTTGAACTCTTGGATCCAGCAA  149
      |||||   ||||||||| |   ||| ||||||||||| ||||||||||||
seq2  GAGCT--GACACAGAAAGG---TAT-AGCTTGAACTC-TGGATCCAGCAA  133

seq1  GATGGTTTGAATGAGAACGTTCCCCATAGGTTCTTATCGTTGAACACTTA  199
      ||| ||||||||||| |||||||||||||| |||||||| ||||||||||
seq2  GAT-GTTTGAATGAG-ACGTTCCCCATAGG-TCTTATCG-TGAACACTTA  179

seq1  GTACTCAGTTGTTGGTACTCTTTGGAAGGTTTGAGAAGCACAGCCTTGTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCAGTTGTTGGTACTCTTTGGAAGGTTTGAGAAGCACAGCCTTGTG  229

seq1  GGAGGAAGAACATTACTGGAGGAAGGCTTTGAGAGTTTCAAGCCCTTGTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAGAACATTACTGGAGGAAGGCTTTGAGAGTTTCAAGCCCTTGTG  279

seq1  CCTTTTCTAGTTTCATCTCTCTGCTTCATAGTTGAGGTTCAAGATATGTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCTAGTTTCATCTCTCTGCTTCATAGTTGAGGTTCAAGATATGTT  329

seq1  CTCTCAGCTTTAGCTCAGCCTCTATGTGATTTACAGCTATGCACTACCTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGCTTTAGCTCAGCCTCTATGTGATTTACAGCTATGCACTACCTG  379

seq1  CCTAACTTCCCAGCCATGATGGATTCTTATCCAGCTAGAACTGTGGACTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACTTCCCAGCCATGATGGATTCTTATCCAGCTAGAACTGTGGACTC  429

seq1  AAAAACCCTCTTCACTCTTTAACTTACTTTGTTCATGCTGCTTTTATCAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCCTCTTCACTCTTTAACTTACTTTGTTCATGCTGCTTTTATCAC  479

seq1  AGGAGTGGTAAAATGACTAACAGAAAGAGCAAAACAGTTTCCTGTGCTAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTGGTAAAATGACTAACAGAAAGAGCAAAACAGTTTCCTGTGCTAA  529

seq1  GAAATTCATGCCTGAAATGAGGACAAAGATTTGCTTTAGGTTTTCCTTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCATGCCTGAAATGAGGACAAAGATTTGCTTTAGGTTTTCCTTGT  579

seq1  GCAGGATGGCATTTCTTTGATGATTCACAGGTTTTGAGAACTTTCATGTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGATGGCATTTCTTTGATGATTCACAGGTTTTGAGAACTTTCATGTT  629

seq1  CACTGGGCTGGTTATGTTTCAGGGTTTCAGGTTAAAAAAGGGAAAAGGTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGCTGGTTATGTTTCAGGGTTTCAGGTTAAAAAAGGGAAAAGGTT  679

seq1  AAAATCTAGCTTGACAAAATTGTATATTTACGAGCTCTTCTGAAAAAATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTAGCTTGACAAAATTGTATATTTACGAGCTCTTCTGAAAAAATA  729

seq1  ATAATAATTAATAATAATATAAGGATTAATCAGAGCCTTTATTACCTGGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATTAATAATAATATAAGGATTAATCAGAGCCTTTATTACCTGGA  779

seq1  GCACAAAATTAACAGAAAAGTTCTAGGACTGGGAAAATTTTGAAAGTAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAAATTAACAGAAAAGTTCTAGGACTGGGAAAATTTTGAAAGTAGA  829

seq1  AATACATAGGCCACTCCAAGATTGTAAATACAATGTAACTGAGTCATGTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATAGGCCACTCCAAGATTGTAAATACAATGTAACTGAGTCATGTC  879

seq1  TGAACAGCTCCCAGATCAGTGCTAGCATTCCAGCTTAGCTTTACCAACAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAGCTCCCAGATCAGTGCTAGCATTCCAGCTTAGCTTTACCAACAG  929

seq1  ACATTCTGAATGGCCTTTCCTGAGGTGGTGTCCTTAAGAATACCTCTTTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTGAATGGCCTTTCCTGAGGTGGTGTCCTTAAGAATACCTCTTTT  979

seq1  CAGAGAGAGAGAGAAAACACACTGCCTCATTTTTTTCCATGTGAATCAAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGAGAGAGAAAACACACTGCCTCATTTTTTTCCATGTGAATCAAT  1029

seq1  TTCAGATATCACAGTAGAGACTTCTACTTCGATAATAAAGTTCATTTGAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATATCACAGTAGAGACTTCTACTTCGATAATAAAGTTCATTTGAG  1079

seq1  GGTGTGAATTC  1110
      |||||||||||
seq2  GGTGTGAATTC  1090