BAC Information

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BAC

Clone NameB6Ng01-116F04
Chromosome8 (Build37)
Map Location 85,068,270 - 85,069,470
singlet/doubletsinglet
Overlap genenone
Upstream geneInpp4b, LOC671182, Il15
Downstream geneEG666564, LOC675800, EG666289, Zfp330, Rnf150, LOC100039688, Tbc1d9, Ucp1, Elmod2, 4933434I20Rik, Clgn, Scoc, LOC546077, LOC675854, Olfr370
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116F04.bB6Ng01-116F04.g
ACCDH921349DH921350
length1,1841,170
definitionDH921349|Mus musculus domesticus DNA, BAC clone: B6Ng01-116F04, 5' end.DH921350|Mus musculus domesticus DNA, BAC clone: B6Ng01-116F04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttctggtctttgttttattccatcagtaaatatgcctattttt
attcagtagcacatttctaccttcagctaatgttcttttactctgtcagc
ttgtgtgttcatacctgatgccctcctttatttctccccaccctttattc
ctttcccctttgaaggactcatcttgttctaaagtttagaattattatgc
tatcaatgaacaaacatagtgtcaaacaatgcttcagaaaccgctggaat
aaattttgtttaatgaacttttattaccttattaaatctactaaagattt
tatcacttcttatttcactaatttcacttgtacaaacatgcatttgaata
atatcttattcatgagatagcttatttagccaaaagacaatacttcattt
gcagttcttgattaactctgtcttcagaactcctcctatcccttctcagg
gattttataaactacaaatttcaactggatgatccagttcatgagtctgt
gcacaacacccatgaagccaaacatcttgttttcatgtggcccatgtatg
aatattttaacattttaagtagttgaaagaattcaagaccagtattttct
gattcaataagattatgtaaagtcaaatttcaatgccataattcaagttt
actgggaacatattattgtatagtatctgtggattcaacaatgaaaacct
agagagtagactaatgtgtctgcaaaacctatcatctacatctggatctt
ataggtaatgcttgccagttccttacttaggctctgctgtaagaataaga
aacattaactgtatatgggatgtatcccccaggtggggcagtctatggat
ggcttttccttaagtctctgttccacactttgtctctgtatctcctccca
tgggtattttgtttcctcttctaagaaggacagaagcatccatactttgg
gcttcattcttcttgagcttcatgtggtcttcatgtatcttgggcatttt
gagcttctgggctaatatcacttatcagtgggtacataccatgtgttttc
ttttgtgattgggtactcatcagatgatatttttctagtcatcatttgtc
tagatttcatgagtcattgtttttaatagtgagtagtactcaatatgtgt
aatgtacacattctgtatgcatcctctgtaaagg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
aggtgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtaccaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
aagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaagtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatttgaa
aggacccagatgtagctgtctctttgtgagactatgccggggcctagcaa
acacagaagtgggatgctcacagtcagctaatggattgatcatagggctc
ccaatagaggagctggagaagtagccaaggagctaaagggatctgcaacc
ctatagtgacacattatgaactaccagtactcggactctgacttctagct
ggcattatatcaaaagaatggctagtcgccatccattgtaagagaaggcc
attggaactgcacttttatgtccagtacaggtaatcaggcaaaagtgaat
gtggtgggctgggagtgtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_85068270_85069470
seq2: B6Ng01-116F04.b_45_1228 (reverse)

seq1  CCTTTAACAGAGGAATGCATACAGAAAATGTGGTACATTTACACATATTG  50
      ||||| ||||||| ||||||||||  ||||| ||||| ||||||||||||
seq2  CCTTT-ACAGAGG-ATGCATACAG--AATGT-GTACA-TTACACATATTG  44

seq1  AGTACTACTCAACTATTAAAAACAATGACTTCATGAAATTCTTAGACAAA  100
      |||||||||| |||||||||||||||||| |||||||||   ||||||||
seq2  AGTACTACTC-ACTATTAAAAACAATGAC-TCATGAAAT--CTAGACAAA  90

seq1  TGGATGGAACTAG-AAAATATCATCCTGATTGAGGTAACCCAATCACAAA  149
      | ||||  ||||| |||||||||| |||| ||||   |||||||||||||
seq2  T-GATG--ACTAGAAAAATATCAT-CTGA-TGAG--TACCCAATCACAAA  133

seq1  AGAAAACACATGGTATGTACCCACTGATAAGTGGATATTAGCCCAGAAGC  199
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGAAAACACATGGTATGTACCCACTGATAAGT-GATATTAGCCCAGAAGC  182

seq1  TCAAAATGCCCAAGATACATGAAGACCACATGAAGCTCAAGAAGAATGAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATGCCCAAGATACATGAAGACCACATGAAGCTCAAGAAGAATGAA  232

seq1  GCCCAAAGTATGGATGCTTCTGTCCTTCTTAGAAGAGGAAACAAAATACC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAAGTATGGATGCTTCTGTCCTTCTTAGAAGAGGAAACAAAATACC  282

seq1  CATGGGAGGAGATACAGAGACAAAGTGTGGAACAGAGACTTAAGGAAAAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGAGGAGATACAGAGACAAAGTGTGGAACAGAGACTTAAGGAAAAG  332

seq1  CCATCCATAGACTGCCCCACCTGGGGGATACATCCCATATACAGTTAATG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCATAGACTGCCCCACCTGGGGGATACATCCCATATACAGTTAATG  382

seq1  TTTCTTATTCTTACAGCAGAGCCTAAGTAAGGAACTGGCAAGCATTACCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTATTCTTACAGCAGAGCCTAAGTAAGGAACTGGCAAGCATTACCT  432

seq1  ATAAGATCCAGATGTAGATGATAGGTTTTGCAGACACATTAGTCTACTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGATCCAGATGTAGATGATAGGTTTTGCAGACACATTAGTCTACTCT  482

seq1  CTAGGTTTTCATTGTTGAATCCACAGATACTATACAATAATATGTTCCCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTTTTCATTGTTGAATCCACAGATACTATACAATAATATGTTCCCA  532

seq1  GTAAACTTGAATTATGGCATTGAAATTTGACTTTACATAATCTTATTGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACTTGAATTATGGCATTGAAATTTGACTTTACATAATCTTATTGAA  582

seq1  TCAGAAAATACTGGTCTTGAATTCTTTCAACTACTTAAAATGTTAAAATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAATACTGGTCTTGAATTCTTTCAACTACTTAAAATGTTAAAATA  632

seq1  TTCATACATGGGCCACATGAAAACAAGATGTTTGGCTTCATGGGTGTTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATACATGGGCCACATGAAAACAAGATGTTTGGCTTCATGGGTGTTGT  682

seq1  GCACAGACTCATGAACTGGATCATCCAGTTGAAATTTGTAGTTTATAAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGACTCATGAACTGGATCATCCAGTTGAAATTTGTAGTTTATAAAA  732

seq1  TCCCTGAGAAGGGATAGGAGGAGTTCTGAAGACAGAGTTAATCAAGAACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGAGAAGGGATAGGAGGAGTTCTGAAGACAGAGTTAATCAAGAACT  782

seq1  GCAAATGAAGTATTGTCTTTTGGCTAAATAAGCTATCTCATGAATAAGAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGAAGTATTGTCTTTTGGCTAAATAAGCTATCTCATGAATAAGAT  832

seq1  ATTATTCAAATGCATGTTTGTACAAGTGAAATTAGTGAAATAAGAAGTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCAAATGCATGTTTGTACAAGTGAAATTAGTGAAATAAGAAGTGA  882

seq1  TAAAATCTTTAGTAGATTTAATAAGGTAATAAAAGTTCATTAAACAAAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCTTTAGTAGATTTAATAAGGTAATAAAAGTTCATTAAACAAAAT  932

seq1  TTATTCCAGCGGTTTCTGAAGCATTGTTTGACACTATGTTTGTTCATTGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCCAGCGGTTTCTGAAGCATTGTTTGACACTATGTTTGTTCATTGA  982

seq1  TAGCATAATAATTCTAAACTTTAGAACAAGATGAGTCCTTCAAAGGGGAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATAATAATTCTAAACTTTAGAACAAGATGAGTCCTTCAAAGGGGAA  1032

seq1  AGGAATAAAGGGTGGGGAGAAATAAAGGAGGGCATCAGGTATGAACACAC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATAAAGGGTGGGGAGAAATAAAGGAGGGCATCAGGTATGAACACAC  1082

seq1  AAGCTGACAGAGTAAAAGAACATTAGCTGAAGGTAGAAATGTGCTACTGA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGACAGAGTAAAAGAACATTAGCTGAAGGTAGAAATGTGCTACTGA  1132

seq1  ATAAAAATAGGCATATTTACTGATGGAATAAAACAAAGACCAGAAGGAAT  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATAGGCATATTTACTGATGGAATAAAACAAAGACCAGAAGGAAT  1182

seq1  TC  1201
      ||
seq2  TC  1184