BAC Information

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BAC

Clone NameB6Ng01-116G23
Chromosome8 (Build37)
Map Location 49,677,278 - 49,678,392
singlet/doubletsinglet
Overlap geneOdz3
Upstream geneLOC384819, LOC667422, Ing2, LOC546058, Cdkn2aip, LOC100039801, Cldn22, Wwc2, LOC100040113, Dctd
Downstream gene2900073C17Rik, LOC100039866, 4930555F03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116G23.bB6Ng01-116G23.g
ACCDH921434DH921435
length1,110693
definitionDH921434|Mus musculus domesticus DNA, BAC clone: B6Ng01-116G23, 5' end.DH921435|Mus musculus domesticus DNA, BAC clone: B6Ng01-116G23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccccttctccatttcaagaatgtgaccctccgagttcgcccctt
tgagataagtgcttgttgttggacttaaggcttttctctagggaaatgca
actttccagccgatgagcctaaaaatacccccagctgcccaaaatacagc
ctatatttctgtctgccttttatttatgttttactgtagcatgaagaagt
atctattaaggaatttggaggaaaagccctccgggaggaagagggaataa
attggtgccaagaaatgaaagtttacatagaactgttaattttttttatc
tcctcttttgcaatgatttattagtcataggaaccagaagaagagaacca
cccggccaggctcctatctgctttctgggctctggtcctgttcagggtta
agtttctcacagtaagatagaaaattgagataaaagatgaggcagtgtct
gaaaaggaagtgtaaggtatttgaactcaggagacggtttatagaaacag
gcaggatgttgctgtaacacacaagaggagaatatcaaggtaaatgtata
caagtttacatgcttcttaaccatagaaaggatgtagaaaggctttccag
tgctttggcatcgctgttccactctttatcttttgacaatgatagaagga
agactggagaatgagcaacggacacctaaagacggcatagagcagccaag
gtaagagaaaactaggtcgcttgctgatgatttattgggatgtcttcctg
aaatgatgcgatatattttgaacaaatgtcaatttcattattacaacttt
taaaattcagagtcatatttttatagccttaatatgttccctttggaagt
cttccttcttcctgaaggtcagttgttaacaaaatccattcattcattca
ctcaacaaatgcttgaggtccggggtcccaacaccaatgtcactcggtta
caatgttacgaaaagtacaacaacatgacatttccttttctgttagaatg
acattatttaaagattcgaactacttactactagcttttctttatagagc
cttcaagggtcacgcttcctgtaaattgttatttttgacattatttgaat
aattagctgc

gaattccaaagaaattctggaaaattttcaagtctggactatggcattta
gacccagaaatgacaaatgtgtctggaaacgctgctctccatgaaaggaa
tatataggtttcttttggttttatatatatgtgtgtgtatatatatatat
atatatatatatatatatatatatatatatataaaaaaaaaaaatatcta
ttttgtggaggcatgggtgtttagacacatatgaattttttgtgtgtgtg
tgtgtgagtctagatctatatatttattattatatttttttgtttttgtc
tgtgtctccttctagtgtgacatatatatatggaggggggggcggggggg
cgccacactcgcctattcgtccgagaaaacatagaatttatacaaatgta
aatgcttaggtttgagatgaccaaaacaaaaagtactttgagatttgaca
attatgggacatctaagtaatggcaattagatcccatcggcgtcttctgg
ggtgctggaagcaccaccctctgcttttcgatacttctccagtttagcaa
tcagttctttcgcaggattgaaaaccccatgggtctgttgctcacaaaca
taacatcgtggagtggttcggaaatgctgcagtgcacaggtctcacagaa
ataatgtttacacttgggttgacaaccggattctggaaggttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_49677278_49678392
seq2: B6Ng01-116G23.b_41_1150

seq1  GAATTCCCCCTTCTCCATTTCAAGAATGTGACCCTCCGAGTTCGCCCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCCTTCTCCATTTCAAGAATGTGACCCTCCGAGTTCGCCCCTT  50

seq1  TGAGATAAGTGCTTGTTGTTGGACTTAAGGCTTTTCTCTAGGGAAATGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATAAGTGCTTGTTGTTGGACTTAAGGCTTTTCTCTAGGGAAATGCA  100

seq1  ACTTTCCAGCCGATGAGCCTAAAAATACCCCCAGCTGCCCAAAATACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCAGCCGATGAGCCTAAAAATACCCCCAGCTGCCCAAAATACAGC  150

seq1  CTATATTTCTGTCTGCCTTTTATTTATGTTTTACTGTAGCATGAAGAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTTCTGTCTGCCTTTTATTTATGTTTTACTGTAGCATGAAGAAGT  200

seq1  ATCTATTAAGGAATTTGGAGGAAAAGCCCTCCGGGAGGAAGAGGGAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTAAGGAATTTGGAGGAAAAGCCCTCCGGGAGGAAGAGGGAATAA  250

seq1  ATTGGTGCCAAGAAATGAAAGTTTACATAGAACTGTTAATTTTTTTTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTGCCAAGAAATGAAAGTTTACATAGAACTGTTAATTTTTTTTATC  300

seq1  TCCTCTTTTGCAATGATTTATTAGTCATAGGAACCAGAAGAAGAGAACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTTTGCAATGATTTATTAGTCATAGGAACCAGAAGAAGAGAACCA  350

seq1  CCCGGCCAGGCTCCTATCTGCTTTCTGGGCTCTGGTCCTGTTCAGGGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGCCAGGCTCCTATCTGCTTTCTGGGCTCTGGTCCTGTTCAGGGTTA  400

seq1  AGTTTCTCACAGTAAGATAGAAAATTGAGATAAAAGATGAGGCAGTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTCACAGTAAGATAGAAAATTGAGATAAAAGATGAGGCAGTGTCT  450

seq1  GAAAAGGAAGTGTAAGGTATTTGAACTCAGGAGACGGTTTATAGAAACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGAAGTGTAAGGTATTTGAACTCAGGAGACGGTTTATAGAAACAG  500

seq1  GCAGGATGTTGCTGTAACACACAAGAGGAGAATATCAAGGTAAATGTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGATGTTGCTGTAACACACAAGAGGAGAATATCAAGGTAAATGTATA  550

seq1  CAAGTTTACATGCTTCTTAACCATAGAAAGGATGTAGAAAGGCTTTCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTACATGCTTCTTAACCATAGAAAGGATGTAGAAAGGCTTTCCAG  600

seq1  TGCTTTGGCATCGCTGTTCCACTCTTTATCTTTTGACAATGATAGAAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGGCATCGCTGTTCCACTCTTTATCTTTTGACAATGATAGAAGGA  650

seq1  AGACTGGAGAATGAGCAACGGACACCTAAAGACGGCATAGAGCAGCCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGGAGAATGAGCAACGGACACCTAAAGACGGCATAGAGCAGCCAAG  700

seq1  GTAAGAGAAAACTAGGTCGCTTGCTGATGATTTATTGGGATGTCTTCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAGAAAACTAGGTCGCTTGCTGATGATTTATTGGGATGTCTTCCTG  750

seq1  AAATGATGCGATATATTTTGAACAAATGTCAATTTCATTATTACAACTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGATGCGATATATTTTGAACAAATGTCAATTTCATTATTACAACTTT  800

seq1  TAAAATTCAGAGTCATA-TTTTATAGCCTTAATATGTTCCCTTTGGAAGT  849
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TAAAATTCAGAGTCATATTTTTATAGCCTTAATATGTTCCCTTTGGAAGT  850

seq1  CTTCCTTCTTCCTGAAGGTCAGTTGTTAACAAAATCCATTCATTCATTCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCTTCCTGAAGGTCAGTTGTTAACAAAATCCATTCATTCATTCA  900

seq1  CTCAACAAATGCTTGAGGTCCGGGGTCCCAACACCAATGTCACTCGGTTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACAAATGCTTGAGGTCCGGGGTCCCAACACCAATGTCACTCGGTTA  950

seq1  CAATGTTACGAAAAGTAACAAACAACATGACATTTCCTTTCTTGTTAGAA  999
      |||||||||||||||||   ||||||||||||||||||||  ||||||||
seq2  CAATGTTACGAAAAGTA--CAACAACATGACATTTCCTTTTCTGTTAGAA  998

seq1  TGACATTATTTAAAAGATTCGAACTACTTACTACTAGCTTTTCCTTTATA  1049
      ||||||||||| |||||||||||||||||||||||||||||| |||||||
seq2  TGACATTATTT-AAAGATTCGAACTACTTACTACTAGCTTTT-CTTTATA  1046

seq1  GAGGCTTCAAGGGGTCACGCTTCCCTGTAATATGTTA-TTTTGACATATT  1098
      ||| |||||| ||||||||||| |||||||  ||||| |||||||||  |
seq2  GAGCCTTCAA-GGGTCACGCTT-CCTGTAAATTGTTATTTTTGACATTAT  1094

seq1  TTGATAAATTTAGCTGC  1115
      |||| | | ||||||||
seq2  TTGA-ATAATTAGCTGC  1110


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