BAC Information

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BAC

Clone NameB6Ng01-118C23
Chromosome8 (Build37)
Map Location 58,139,519 - 58,293,364
singlet/doubletdoublet
Overlap geneLOC664916
Upstream geneGm392, LOC100040212, Gm1153, EG664808, EG664818, EG664834, EG664859, EG664876, LOC100040356
Downstream geneAdam29, Glra3, LOC664812, Hpgd, LOC664948, BC088983, Fbxo8, LOC100040431, EG624433
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118C23.bB6Ng01-118C23.g
ACCDH922732DH922733
length1,1611,069
definitionDH922732|Mus musculus domesticus DNA, BAC clone: B6Ng01-118C23, 5' end.DH922733|Mus musculus domesticus DNA, BAC clone: B6Ng01-118C23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,292,198 - 58,293,364)(58,139,519 - 58,140,594)
sequence
gaattcccaatcatgaagttttaggaaatttaggtggtttcttaattcat
ttcaaatatacctaactaaaagaaacaaacaaactattacataattcaca
agtgcttaggaaagatggcattccttttaaatgttgaaagataaaacaaa
tccattattaaatacaaactatgaacattaagtgaccttagtattcttac
atttgttaacaaagatatagcttccctaaattaactatgagttaaaactt
tttaaaaagtgaatttgatttagttaagttttgggattgtttgagaccaa
tgcaagattgggctatcactctggctttcagttgaacttcctgccttgca
tttcaccttcctaatatttgttgtctctgttttaagatttaaaaaaaaaa
aagaatctaaaatgtttatcttttatccctttgttttgaatatcactcac
ctcaacatctactttagccaacaattcggtttcctactatttataactca
taaattttatactgcatattgtttcctaatttcaaaaatctgtttgttag
cgtaatttgcttttttaccatacattaccaagttccttcattttagtcca
ccaaatataaactgttgttttagtgttttgtttcctgttttccattttat
ttttttaggggaagcactcaacaatgaatttattatgattggaactactg
ttaattttcaggctgctactttgtattttatatagtttcatattttttta
ttttttatgataaactaccatattttgcatatgatgttagtaattcataa
tatgcatgcatttacatatttatgtcttttatttgttctaataatgtaga
tatttcccccctactaattttcacaagcagttcttatggtggtttgaata
tgctggacccatggaaagtggcactgttaggagttgtggccttgttggaa
gaaatttgaactgtgtaggcaggctttgaggttttcagctctgcccagtg
gtgaatagaccctcatctggcttctgctgtagaaaacctctcttggttgc
cttcaatcaagaatggagaactattcagtccttcttcagcactgtgcatc
ttctgcatgatgataatggactgaatctcttaactggtaagtcatctcaa
atgtgtatgct
gaattccaggtgctattggacctgacattataatgggagaggacgtttga
cctggctactgggctgagtgacctcctccggtgggcaaatgtggcagtac
agtgttatgtttactgggatgtgcagttccaaagctagaggttggcagaa
atcttactcctgcagatcccaggacaatatttccagggtttggacatgcc
tcgatccctcacttgccccaggccatggctcccacttctctcagaccaca
caaggcttcaccacagccctaataacaatgggtctccctacacatatcca
gaacctccagagtaagccaaatgaactccttttctacagaaaagcccctc
tgcgtaaatattcacatcattatttgtatctgtaaatatggtgtgtgtat
ttatacaaatatgagtaggaattatatttttgtgaaacatttcctgaact
attagtctaagttgtgcttcattattttgttgtagtttgtttcttcttta
tttatatctaacattttaattataaatgggcttgatgaattgatgctcaa
gagagcagaagttaaagagtaggtctaatatatgataggaagtctctaac
ccccgaatgagtgaagaaacatagagactatctcagtatgagattaccaa
tgggaggcacaaggagtcattccttaactcagtagtttctcgttatttga
taaagaaaaatcctttagggtaaaaaggaaattttttttataccaaaatt
ttattgcacactgtggtttgtggtttcctgaatattttttcaatatgtaa
tacttcaggctaacactgtaagaagtcattagaaataatatcaactttat
tgtttttatgaaaatatgaaactttctgaagtagctcagaagctgcatag
gtttctgatcacaaatcatattaaggaaggtaccagaaattctagaaatc
ctctccgagtagttcaacctcttataaatatattttatgcatcaaattcc
cttcctatagccttttggggggaattaggagatagtttagatttatccag
gactgctatgcctagacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_58292198_58293364
seq2: B6Ng01-118C23.b_44_1204 (reverse)

seq1  AGCATACA-ATTTGAGATGACTTACAGTTTAAGAGATTCAGTCCATTATC  49
      |||||||| ||||||||||||||||   ||||||||||||||||||||||
seq2  AGCATACACATTTGAGATGACTTACCAGTTAAGAGATTCAGTCCATTATC  50

seq1  ATCATGGCAGGAAGGATGGCACAGTGCTGGAGAAGGAACTG-ATAGTTCT  98
      ||||| ||||  | ||| ||||||||||| |||||| |||| ||||||||
seq2  ATCAT-GCAG--AAGAT-GCACAGTGCTGAAGAAGG-ACTGAATAGTTCT  95

seq1  CCA-TCTTGATTGGAAGGCAACCAAGAGAGGTTATCTACAGCAGGAAGCC  147
      ||| |||||||| |||||||||||||||||||| ||||||||| ||||||
seq2  CCATTCTTGATT-GAAGGCAACCAAGAGAGGTTTTCTACAGCA-GAAGCC  143

seq1  AGGATGAGGGTCTTATTCA-CACTGGGCAGAGCTTGAAAACCTCAAAGCC  196
      | |||||||||| |||||| ||||||||||||| ||||||||||||||||
seq2  A-GATGAGGGTC-TATTCACCACTGGGCAGAGC-TGAAAACCTCAAAGCC  190

seq1  TGCCTACACAGTTCAAATTTCTTCCAACAAGGCCACAACTCCTAACAGTG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACACAGTTCAAATTTCTTCCAACAAGGCCACAACTCCTAACAGTG  240

seq1  CCACTTTCCATGGGTCCAGCATATTCAAACCACCATAAGAACTGCTTGTG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTTCCATGGGTCCAGCATATTCAAACCACCATAAGAACTGCTTGTG  290

seq1  AAAATTAGTAGGGGGGAAATATCTACATTATTAGAACAAATAAAAGACAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAGTAGGGGGGAAATATCTACATTATTAGAACAAATAAAAGACAT  340

seq1  AAATATGTAAATGCATGCATATTATGAATTACTAACATCATATGCAAAAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGTAAATGCATGCATATTATGAATTACTAACATCATATGCAAAAT  390

seq1  ATGGTAGTTTATCATAAAAAATAAAAAAATATGAAACTATATAAAATACA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAGTTTATCATAAAAAATAAAAAAATATGAAACTATATAAAATACA  440

seq1  AAGTAGCAGCCTGAAAATTAACAGTAGTTCCAATCATAATAAATTCATTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGCAGCCTGAAAATTAACAGTAGTTCCAATCATAATAAATTCATTG  490

seq1  TTGAGTGCTTCCCCTAAAAAAATAAAATGGAAAACAGGAAACAAAACACT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGCTTCCCCTAAAAAAATAAAATGGAAAACAGGAAACAAAACACT  540

seq1  AAAACAACAGTTTATATTTGGTGGACTAAAATGAAGGAACTTGGTAATGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAACAGTTTATATTTGGTGGACTAAAATGAAGGAACTTGGTAATGT  590

seq1  ATGGTAAAAAAGCAAATTACGCTAACAAACAGATTTTTGAAATTAGGAAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAAAAAAGCAAATTACGCTAACAAACAGATTTTTGAAATTAGGAAA  640

seq1  CAATATGCAGTATAAAATTTATGAGTTATAAATAGTAGGAAACCGAATTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATGCAGTATAAAATTTATGAGTTATAAATAGTAGGAAACCGAATTG  690

seq1  TTGGCTAAAGTAGATGTTGAGGTGAGTGATATTCAAAACAAAGGGATAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTAAAGTAGATGTTGAGGTGAGTGATATTCAAAACAAAGGGATAAA  740

seq1  AGATAAACATTTTAGATTCTTTTTTTTTTTTAAATCTTAAAACAGAGACA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAACATTTTAGATTCTTTTTTTTTTTTAAATCTTAAAACAGAGACA  790

seq1  ACAAATATTAGGAAGGTGAAATGCAAGGCAGGAAGTTCAACTGAAAGCCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATATTAGGAAGGTGAAATGCAAGGCAGGAAGTTCAACTGAAAGCCA  840

seq1  GAGTGATAGCCCAATCTTGCATTGGTCTCAAACAATCCCAAAACTTAACT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGATAGCCCAATCTTGCATTGGTCTCAAACAATCCCAAAACTTAACT  890

seq1  AAATCAAATTCACTTTTTAAAAAGTTTTAACTCATAGTTAATTTAGGGAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAAATTCACTTTTTAAAAAGTTTTAACTCATAGTTAATTTAGGGAA  940

seq1  GCTATATCTTTGTTAACAAATGTAAGAATACTAAGGTCACTTAATGTTCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATATCTTTGTTAACAAATGTAAGAATACTAAGGTCACTTAATGTTCA  990

seq1  TAGTTTGTATTTAATAATGGATTTGTTTTATCTTTCAACATTTAAAAGGA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTGTATTTAATAATGGATTTGTTTTATCTTTCAACATTTAAAAGGA  1040

seq1  ATGCCATCTTTCCTAAGCACTTGTGAATTATGTAATAGTTTGTTTGTTTC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCATCTTTCCTAAGCACTTGTGAATTATGTAATAGTTTGTTTGTTTC  1090

seq1  TTTTAGTTAGGTATATTTGAAATGAATTAAGAAACCACCTAAATTTCCTA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTTAGGTATATTTGAAATGAATTAAGAAACCACCTAAATTTCCTA  1140

seq1  AAACTTCATGATTGGGAATTC  1167
      |||||||||||||||||||||
seq2  AAACTTCATGATTGGGAATTC  1161

seq1: chr8_58139519_58140594
seq2: B6Ng01-118C23.g_66_1134

seq1  GAATTCCAGGTGCTATTGGACCTGACATTATAATGGGAGAGGACGTTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTGCTATTGGACCTGACATTATAATGGGAGAGGACGTTTGA  50

seq1  CCTGGCTACTGGGCTGAGTGACCTCCTCCGGTGGGCAAATGTGGCAGTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTACTGGGCTGAGTGACCTCCTCCGGTGGGCAAATGTGGCAGTAC  100

seq1  AGTGTTATGTTTACTGGGATGTGCAGTTCCAAAGCTAGAGGTTGGCAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTATGTTTACTGGGATGTGCAGTTCCAAAGCTAGAGGTTGGCAGAA  150

seq1  ATCTTACTCCTGCAGATCCCAGGACAATATTTCCAGGGTTTGGACATGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTACTCCTGCAGATCCCAGGACAATATTTCCAGGGTTTGGACATGCC  200

seq1  TCGATCCCTCACTTGCCCCAGGCCATGGCTCCCACTTCTCTCAGACCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATCCCTCACTTGCCCCAGGCCATGGCTCCCACTTCTCTCAGACCACA  250

seq1  CAAGGCTTCACCACAGCCCTAATAACAATGGGTCTCCCTACACATATCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTTCACCACAGCCCTAATAACAATGGGTCTCCCTACACATATCCA  300

seq1  GAACCTCCAGAGTAAGCCAAATGAACTCCTTTTCTACAGAAAAGCCCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTCCAGAGTAAGCCAAATGAACTCCTTTTCTACAGAAAAGCCCCTC  350

seq1  TGCGTAAATATTCACATCATTATTTGTATCTGTAAATATGGTGTGTGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTAAATATTCACATCATTATTTGTATCTGTAAATATGGTGTGTGTAT  400

seq1  TTATACAAATATGAGTAGGAATTATATTTTTGTGAAACATTTCCTGAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACAAATATGAGTAGGAATTATATTTTTGTGAAACATTTCCTGAACT  450

seq1  ATTAGTCTAAGTTGTGCTTCATTATTTTGTTGTAGTTTGTTTCTTCTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTCTAAGTTGTGCTTCATTATTTTGTTGTAGTTTGTTTCTTCTTTA  500

seq1  TTTATATCTAACATTTTAATTATAAATGGGCTTGATGAATTGATGCTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATCTAACATTTTAATTATAAATGGGCTTGATGAATTGATGCTCAA  550

seq1  GAGAGCAGAAGTTAAAGAGTAGGTCTAATATATGATAGGAAGTCTCTAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCAGAAGTTAAAGAGTAGGTCTAATATATGATAGGAAGTCTCTAAC  600

seq1  CCCCGAATGAGTGAAGAAACATAGAGACTATCTCAGTATGAGATTACCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGAATGAGTGAAGAAACATAGAGACTATCTCAGTATGAGATTACCAA  650

seq1  TGGGAGGCACAAGGAGTCATTCCTTAACTCAGTAGTTTCTCGTTATTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGCACAAGGAGTCATTCCTTAACTCAGTAGTTTCTCGTTATTTGA  700

seq1  TAAAGAAAAATCCTTTAGGGTAAAAAGGAAATTTTTTTTATACCAAAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAAAATCCTTTAGGGTAAAAAGGAAATTTTTTTTATACCAAAATT  750

seq1  TTATTGCACACTGTGGTTTGTGGTTTCCTGAATATTTTTTCAATATGTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGCACACTGTGGTTTGTGGTTTCCTGAATATTTTTTCAATATGTAA  800

seq1  TACTTCAGGCTAACACTGTAAGAAAGTCATTAGAAATAATATCAACTTTA  850
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TACTTCAGGCTAACACTGTAAG-AAGTCATTAGAAATAATATCAACTTTA  849

seq1  TTGTTTTTATGAAAAATATGAAACTTTCTGAAGTAGCTCAGAAGCTGCAT  900
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTATG-AAAATATGAAACTTTCTGAAGTAGCTCAGAAGCTGCAT  898

seq1  AGGTTTCTGAATCACAAATCATATTAAGGAAGGTACCAGAAATTCTAGAA  950
      ||||||||| |||||||||||||||||||||||||||||||||||||| |
seq2  AGGTTTCTG-ATCACAAATCATATTAAGGAAGGTACCAGAAATTCTAG-A  946

seq1  AATCCTCTCCGAGTAGTTCAACCTCTTATAAATATATTTTATGCATCAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCTCCGAGTAGTTCAACCTCTTATAAATATATTTTATGCATCAAA  996

seq1  TTCCCTTCCTATAGCCTTTTGGGGGGAATTA-GAGATAAGTTTAAGATTT  1049
      ||||||||||||||||||||||||||||||| ||||| ||||| ||||||
seq2  TTCCCTTCCTATAGCCTTTTGGGGGGAATTAGGAGAT-AGTTT-AGATTT  1044

seq1  AATCCA-GACTGCTATTGCCTAAGACAA  1076
       ||||| |||||||| ||||| ||||||
seq2  -ATCCAGGACTGCTA-TGCCT-AGACAA  1069