BAC Information

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BAC

Clone NameB6Ng01-118N10
Chromosome8 (Build37)
Map Location 83,927,512 - 84,035,281
singlet/doubletdoublet
Overlap genenone
Upstream geneGypa, Frem3, Smarca5, Gab1, LOC666237, LOC100039496, LOC234501, LOC100039518, Usp38, EG70793, LOC236010, LOC384852
Downstream geneInpp4b, LOC671182, Il15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118N10.bB6Ng01-118N10.g
ACCDH923215DH923216
length1,1371,087
definitionDH923215|Mus musculus domesticus DNA, BAC clone: B6Ng01-118N10, 5' end.DH923216|Mus musculus domesticus DNA, BAC clone: B6Ng01-118N10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,034,116 - 84,035,281)(83,927,512 - 83,928,624)
sequence
gaattcactgctacccttacttaacctgtcatattctggcatctgtacta
gcactgaagtcccatatcaccaccaaccaccagttctgtagttctctgag
catttcaaaatgaggctctagtcagtcataaaagtgtgctcctttatagc
cagccagtagagaaggccagcaagggagcaaattgagtaacacccaggtg
tccaggaaaaaataggtttgctatttcactcttttgttgtaaaattactt
gggaaattacttctccttgcatgatttacgtggtttttataaaagaactt
tcctccagtgaggaagtagataaaacctcagtgtgcagcctgtgcactcc
attgcaggcatttattctcagaatagtaagtcagagggaaccaaacacaa
taggaaacttggagagattccacttttgctttaaaagtctgccagttgta
gtttattagcctgtgacgaacttctaaattcacatcttattcatataata
ttgaagtcacctgtaagcaacctaagttgcgttgttatcaggtatcttgt
ttgtacacacgctttataattccaagaaaagatgacagagggaagatggc
taatgaaaagagatctgtgactgaacatagggcaagtgactccaacattg
ccctcccttgagataatcccatgctaaatccttcaacctcattcctagaa
aaaattgactgtttacatagttgtcacaaataaaagagtctgagtcaact
tggaaagaaaattatatttattagcaagtgaaccaaaatcatactcaaac
caagcaagccacgtgcattttttttttatggtgcaagaggcatgtttatt
ggaaactgaatctttgcagtttatgtgcattttctttttttttccatttt
ttattaggtatttagctcatttacatttccaatgctattaccaaaagtcc
cccataccacccacccccaatccctaccaaccactccccttttggcctgg
cgtcgtgcatttttttttatcatcttctcttaaaccctattagctaggca
aggagttgctcagtgagtgatgcttgcatcagaatgggcagctggatccc
gacttcactccactgacgatgtggtaggactcacatg
gaattcttaacagaggaatctcaaatggcagaggcacttaaagaaatgaa
caaagtccttagtcatcagggaagtgcaaactcaaaacaactctgacagt
gcatcttataccctgcatgagaattcagtttcatgcagggtaatgaccta
atggctaagatcaaaaactcaaataagagctcatgatggggaggatgtgg
aataaggtgtaaccaagttgagctcaaagtcctggtggttgtgatagtcc
ttctacctcagcacccaaaggctggaatttcagatatgagccatcatgat
cagatcattataattaatcttagttgagttccaattactattattatcat
taattacactattattcaattaatactatttttgtagtgaatatttatca
taaatattttagtattttaatacaacagccccaatttgttcccacccttt
aaaaactataatattttattaattatttgagaattttatatatacacaca
tatatacacatacatatatacatatgatatagtcttatcatactcattct
ccagtcctcctaactcaccttccattttattatccagaatcttgcttgtg
ttgcccatatactagtgggtgtgggatcattcagttggagcatgattaat
taattagaggccgcactctttaaaaaacttactttccgtagatagaagct
attaactgtagatagtacctcccattttgtttaatagtgctaacacagga
taatttgataagcagctattaatttaacttagagaataacaattttattc
atactctgacattctagattttacaatgtagattaaattcatctacatac
attttcttttctctttaaacaaacaaataaatttacaaatgaaattcttt
gaccttgtttgaaaaattctttatcactatttcattttctgatagtagtt
tcgttgggtagagaatctagttgtcatttatttcttcaacatctggaata
ctcatttcttctgtttacatgattcagatagaagtgatacagtcttacct
aatttttaaagttaagggtttttgcctctggcatctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_84034116_84035281
seq2: B6Ng01-118N10.b_48_1184 (reverse)

seq1  CATGTGAGTCCTACCACAT--TCAGTTCCATGTGAGTGAGTTCTGGGGAT  48
      |||||||||||||||||||  |||||       ||||||  ||  |||||
seq2  CATGTGAGTCCTACCACATCGTCAGT------GGAGTGAAGTC--GGGAT  42

seq1  CCAAGCTAGACCCCCATTCCTGAATGGCAAGCATTCCACTCACTGAGCCA  98
      || ||||     |||||| ||||   ||||||||  ||||||||||| ||
seq2  CC-AGCT----GCCCATT-CTGA--TGCAAGCAT--CACTCACTGAG-CA  81

seq1  ACTCCTTTGCCCTAGCTAAATAAGGGTTTTAAGAGAAGATGAATTAAAAA  148
      |||||||   ||||||| ||||  || |||||||||||||||  ||||||
seq2  ACTCCTT--GCCTAGCT-AATA--GGGTTTAAGAGAAGATGA--TAAAAA  124

seq1  AAAATGCACGACGCCAGGGCCAAAAAGGGGGAGTGGGTGGGTAGGGGATT  198
      |||||||||||||||| ||||||||  ||||||| ||| |||| ||||||
seq2  AAAATGCACGACGCCA-GGCCAAAA--GGGGAGT-GGTTGGTA-GGGATT  169

seq1  GGGGGTGGGTGGGTATGGGGGACTTTTGGT-ATAGCATTGGAAATGTAAA  247
      |||||||||| ||||||||||||||||||| |||||||||||||||||||
seq2  GGGGGTGGGT-GGTATGGGGGACTTTTGGTAATAGCATTGGAAATGTAAA  218

seq1  TGAGCTAAATACCTAATAAAAAATGGAAAAAAAAAGAAAATGCACATAAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTAAATACCTAATAAAAAATGGAAAAAAAAAGAAAATGCACATAAA  268

seq1  CTGCAAAGATTCAGTTTCCAATAAACATGCCTCTTGCACCATAAAAAAAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAAGATTCAGTTTCCAATAAACATGCCTCTTGCACCATAAAAAAAA  318

seq1  AATGCACGTGGCTTGCTTGGTTTGAGTATGATTTTGGTTCACTTGCTAAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCACGTGGCTTGCTTGGTTTGAGTATGATTTTGGTTCACTTGCTAAT  368

seq1  AAATATAATTTTCTTTCCAAGTTGACTCAGACTCTTTTATTTGTGACAAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAATTTTCTTTCCAAGTTGACTCAGACTCTTTTATTTGTGACAAC  418

seq1  TATGTAAACAGTCAATTTTTTCTAGGAATGAGGTTGAAGGATTTAGCATG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAAACAGTCAATTTTTTCTAGGAATGAGGTTGAAGGATTTAGCATG  468

seq1  GGATTATCTCAAGGGAGGGCAATGTTGGAGTCACTTGCCCTATGTTCAGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTATCTCAAGGGAGGGCAATGTTGGAGTCACTTGCCCTATGTTCAGT  518

seq1  CACAGATCTCTTTTCATTAGCCATCTTCCCTCTGTCATCTTTTCTTGGAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATCTCTTTTCATTAGCCATCTTCCCTCTGTCATCTTTTCTTGGAA  568

seq1  TTATAAAGCGTGTGTACAAACAAGATACCTGATAACAACGCAACTTAGGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAGCGTGTGTACAAACAAGATACCTGATAACAACGCAACTTAGGT  618

seq1  TGCTTACAGGTGACTTCAATATTATATGAATAAGATGTGAATTTAGAAGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTACAGGTGACTTCAATATTATATGAATAAGATGTGAATTTAGAAGT  668

seq1  TCGTCACAGGCTAATAAACTACAACTGGCAGACTTTTAAAGCAAAAGTGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCACAGGCTAATAAACTACAACTGGCAGACTTTTAAAGCAAAAGTGG  718

seq1  AATCTCTCCAAGTTTCCTATTGTGTTTGGTTCCCTCTGACTTACTATTCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTCCAAGTTTCCTATTGTGTTTGGTTCCCTCTGACTTACTATTCT  768

seq1  GAGAATAAATGCCTGCAATGGAGTGCACAGGCTGCACACTGAGGTTTTAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATAAATGCCTGCAATGGAGTGCACAGGCTGCACACTGAGGTTTTAT  818

seq1  CTACTTCCTCACTGGAGGAAAGTTCTTTTATAAAAACCACGTAAATCATG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTCCTCACTGGAGGAAAGTTCTTTTATAAAAACCACGTAAATCATG  868

seq1  CAAGGAGAAGTAATTTCCCAAGTAATTTTACAACAAAAGAGTGAAATAGC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGAAGTAATTTCCCAAGTAATTTTACAACAAAAGAGTGAAATAGC  918

seq1  AAACCTATTTTTTCCTGGACACCTGGGTGTTACTCAATTTGCTCCCTTGC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTATTTTTTCCTGGACACCTGGGTGTTACTCAATTTGCTCCCTTGC  968

seq1  TGGCCTTCTCTACTGGCTGGCTATAAAGGAGCACACTTTTATGACTGACT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTTCTCTACTGGCTGGCTATAAAGGAGCACACTTTTATGACTGACT  1018

seq1  AGAGCCTCATTTTGAAATGCTCAGAGAACTACAGAACTGGTGGTTGGTGG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTCATTTTGAAATGCTCAGAGAACTACAGAACTGGTGGTTGGTGG  1068

seq1  TGATATGGGACTTCAGTGCTAGTACAGATGCCAGAATATGACAGGTTAAG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATGGGACTTCAGTGCTAGTACAGATGCCAGAATATGACAGGTTAAG  1118

seq1  TAAGGGTAGCAGTGAATTC  1166
      |||||||||||||||||||
seq2  TAAGGGTAGCAGTGAATTC  1137

seq1: chr8_83927512_83928624
seq2: B6Ng01-118N10.g_68_1154

seq1  GAATTCTTAACAGAGGAATCTCAAATGGCAGAGGCACTTAAAGAAATGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAACAGAGGAATCTCAAATGGCAGAGGCACTTAAAGAAATGAA  50

seq1  CAAAGTCCTTAGTCATCAGGGAAGTGCAAACTCAAAACAACTCTGACAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTCCTTAGTCATCAGGGAAGTGCAAACTCAAAACAACTCTGACAGT  100

seq1  GCATCTTATACCCTGCATGAGAATTCAGTTTCATGCAGGGTAATGACCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTTATACCCTGCATGAGAATTCAGTTTCATGCAGGGTAATGACCTA  150

seq1  ATGGCTAAGATCAAAAACTCAAATAAGAGCTCATGATGGGGAGGATGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTAAGATCAAAAACTCAAATAAGAGCTCATGATGGGGAGGATGTGG  200

seq1  AATAAGGTGTAACCAAGTTGAGCTCAAAGTCCTGGTGGTTGTGATAGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGGTGTAACCAAGTTGAGCTCAAAGTCCTGGTGGTTGTGATAGTCC  250

seq1  TTCTACCTCAGCACCCAAAGGCTGGAATTTCAGATATGAGCCATCATGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACCTCAGCACCCAAAGGCTGGAATTTCAGATATGAGCCATCATGAT  300

seq1  CAGATCATTATAATTAATCTTAGTTGAGTTCCAATTACTATTATTATCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCATTATAATTAATCTTAGTTGAGTTCCAATTACTATTATTATCAT  350

seq1  TAATTACACTATTATTCAATTAATACTATTTTTGTAGTGAATATTTATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACACTATTATTCAATTAATACTATTTTTGTAGTGAATATTTATCA  400

seq1  TAAATATTTTAGTATTTTAATACAACAGCCCCAATTTGTTCCCACCCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTTTAGTATTTTAATACAACAGCCCCAATTTGTTCCCACCCTTT  450

seq1  AAAAACTATAATATTTTATTAATTATTTGAGAATTTTATATATACACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTATAATATTTTATTAATTATTTGAGAATTTTATATATACACACA  500

seq1  TATATACACATACATATATACATATGATATAGTCTTATCATACTCATTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACACATACATATATACATATGATATAGTCTTATCATACTCATTCT  550

seq1  CCAGTCCTCCTAACTCACCTTCCATTTTATTATCCAGAATCTTGCTTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCCTCCTAACTCACCTTCCATTTTATTATCCAGAATCTTGCTTGTG  600

seq1  TTGCCCATATACTAGTGGGTGTGGGATCATTCAGTTGGAGCATGATTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCATATACTAGTGGGTGTGGGATCATTCAGTTGGAGCATGATTAAT  650

seq1  TAATTAGAGGCCGCACTCTTTAAAAAACTTACTTTCCGTAGATAGAAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAGAGGCCGCACTCTTTAAAAAACTTACTTTCCGTAGATAGAAGCT  700

seq1  ATTAACTGTAGATAGTACCTCCCATTTTGTTTAATAGTGCTAACACAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTGTAGATAGTACCTCCCATTTTGTTTAATAGTGCTAACACAGGA  750

seq1  TAATTTGATAAGCAGCTATTAATTTAACTTAGAGAATAACAATTTTATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGATAAGCAGCTATTAATTTAACTTAGAGAATAACAATTTTATTC  800

seq1  ATACTCTGACATTCTAGATTTTACAATGTAGATTAAATTCATCTACATAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCTGACATTCTAGATTTTACAATGTAGATTAAATTCATCTACATAC  850

seq1  ATTTTCTTTTCTCTTTAAACAAAACAAATAAATTTACAAATGAAATTCTT  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ATTTTCTTTTCTCTTTAAAC-AAACAAATAAATTTACAAATGAAATTCTT  899

seq1  TGACCTTTGTTTGAGAAATTCTTTATCACTATTTCATTTTCTTGGATAGT  950
      ||||| |||||||| |||||||||||||||||||||||||||  ||||||
seq2  TGACC-TTGTTTGAAAAATTCTTTATCACTATTTCATTTTCT--GATAGT  946

seq1  AGTTTCGTTGGGTAGAGAATTCTAGGTTTGTCATTTTATTTTCCTTCCAA  1000
      ||||||||||||||||||| |||||  |||||| |||||||  ||| |||
seq2  AGTTTCGTTGGGTAGAGAA-TCTAG--TTGTCA-TTTATTT--CTT-CAA  989

seq1  CATCTGGAATACTTCATTTCCTTCTTGTTTACATGATTTCAGATTAGAAA  1050
      |||||||||||| |||||| |||| ||||||||||| |||||| ||||| 
seq2  CATCTGGAATAC-TCATTT-CTTC-TGTTTACATGA-TTCAGA-TAGAA-  1033

seq1  TTTGATACAGTTCTTACTCTTATTTTTTTAAAGGTATAAGGTGTTTTTGC  1100
        |||||||| |||||| || |  |||||||||   ||||| ||||||||
seq2  -GTGATACAG-TCTTAC-CTAA--TTTTTAAAG--TTAAGG-GTTTTTGC  1075

seq1  TCTCTGGCATCTC  1113
       ||||||||||||
seq2  -CTCTGGCATCTC  1087