BAC Information

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BAC

Clone NameB6Ng01-119B11
Chromosome8 (Build37)
Map Location 45,088,001 - 45,271,584
singlet/doubletdoublet
Overlap genenone
Upstream geneTriml1, LOC622082, EG622117, LOC100039417, Zfp42, Adam26b, Adam26a, EG384813, Adam34, EG384814, LOC100039472, LOC547011, LOC622263
Downstream geneLOC100039508, Fat1, LOC100039673, Mtnr1a, EG622523
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119B11.bB6Ng01-119B11.g
ACCDH923395DH923396
length1,1631,104
definitionDH923395|Mus musculus domesticus DNA, BAC clone: B6Ng01-119B11, 5' end.DH923396|Mus musculus domesticus DNA, BAC clone: B6Ng01-119B11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,270,411 - 45,271,584)(45,088,001 - 45,089,114)
sequence
gaattcactttctaggcttcctaatggaagctatgtttttatttccatct
cttcttttctgaaaggatttcagtatatagcaattttaaaaactgtgact
ggattgtactggtttatatcttgtttattttcatatgcatggaacaattt
taaaggctggtgaagtgctaactaaccttgtaacataaattgaaaaaaaa
acagttactttagcatagaacaagatattcttaacagtctcaaggcatag
actaaatatattggccgcaggacattgcagaacagagcagatttagtagg
agtaaaaaacaaacaaacaaacaaacaaacaaacaaacaaacgaaagaaa
gaaagaaggtcttgcttaaagtatgaacttaccagttaaacagcctggat
ataattactgcttaatctcggatggaaacttgaacaatagggagtacaac
tttctctgaaagaacactcataacatttatcttagaagttttaaagatac
aaaatacatataatacatataatacttggcatagcccagatatcaaagac
atgagtgctcagtatttgctctctcagtccttcggtttgactaggcctag
gtctgaattaactaaacaaccaaaaagaggcctcatgtttaccctctggc
gtgttcacactggcagagtaaagacaagatttgtagtgttggctacttgt
ttatgtgctaaaaagttaacagttatgaaacagagaaagatactgtaagc
ataatctttaattcaccaaagcacctgacatagaaacaaagtcacatgta
tgacaaagggacagatgaagagggttgcaatagggtctgcgggagagatg
gctcagtggttaagagcactggttacttttccagaggtcctgagttcaat
tcccagcaaccacatggtggctcacaaccatctataatgggatctgatgc
cctctttgtcacacagtcatatatgcaagtagagcactcatatgtataaa
taaataaatcttttaaatgttaataaaaaagagaagagatcacttctggc
ggactgccatgaatgaaactcagcactataaacatcggttcttgtcccta
agcccgtagtaaaagccaaagaagcctctatcgcgaatgaactcttctga
tgtctaggtgtgc
gaattcatatccatcatctctattttgcagaatttaacttgttttggttt
tggctgtaacaaaggatcctaggaatattcacaatctgggtgctgagaca
tttgaacttttggggaaccctctctggtttccagatggttgcattccagt
ggtacctccatacaatatactagtgtccatagtcaacttatttcggacat
cttttttgtttgttatattttaattgccctttctctcaacagatggcttt
gtgggataaaaaagtttaatattttctgttttgttaattgttctgtataa
ttttatatatgtatacagtataatgcttagcatgcctaaagttggtttat
tatctccattcccagtattgttccagttctcactccaaatatctctacct
atcataatagcagtatgttctctttgtttctcaagtatgaagtaccagaa
aaatctattaacatacatttccaactttttccttttttggttctttttct
gttgacataattgaatccaagtattgtgattggatacttttaattggtcc
ttactccatttatcctttttttttcagatccatatcagtgttatttataa
acatattagctgcatttataaacctggtccctggtcacaaatgttatata
gctcaaaaagatttccttttaaaaatgattctatgaagggctacttttgc
ttgtagattcaaatttttatggaaaactctcttccacagaaaaggaattg
ggtaagaatatcaatgacaagacacaaaacaccattgtatttgtaaatta
catgcttcaagggctacaacattactacatcaaattgctagccagtttct
agactctatgttcatcaggatagtaacagtttgaagacctttacgggctg
tatgccaccctgtgatggactatgtttcagtcatcacaaaacttgctctt
tacaaagcctgaaacactgaatcaatagaggattctaaactatgcagatg
tcgtaccctattatctatgatgaggatctctgggatactgccatgggtgg
gtattcatacctgctgtaaaatgatcctgaagctcagccaagacctgagg
acta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_45270411_45271584
seq2: B6Ng01-119B11.b_49_1211 (reverse)

seq1  GCACAGACTAGACATCAGAAGAGGTGCCATCGCGGAATAGAGGCTTCTTT  50
      |||||  ||||||||||||||| || |  |||||  ||||||||||||||
seq2  GCACA-CCTAGACATCAGAAGA-GTTCATTCGCG--ATAGAGGCTTCTTT  46

seq1  GCCTTTTTACTAACGGGCTTTAGGGACAGAAACCGATGTTTATAGTGCTG  100
      | | ||||||| |||||| |||||||||  ||||||||||||||||||||
seq2  GGC-TTTTACT-ACGGGC-TTAGGGACAAGAACCGATGTTTATAGTGCTG  93

seq1  GGTTTTCATTCAATGGCAGTCCGCCAGAAGTGATCTCTTCTCTTTTTTAT  150
       | |||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AG-TTTCATTC-ATGGCAGTCCGCCAGAAGTGATCTCTTCTCTTTTTTAT  141

seq1  TAACATTTAAAAAGATTTATTTATTTATACATATGAGTGCTCTACTTGCA  200
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTT-AAAAGATTTATTTATTTATACATATGAGTGCTCTACTTGCA  190

seq1  TATATGACTGTGTGACAAAAGAGGGCATCAGATCCCATTATAGATGGTTG  250
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TATATGACTGTGTGAC-AAAGAGGGCATCAGATCCCATTATAGATGGTTG  239

seq1  TGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAAAGT  289

seq1  AACCAGTGCTCTTAACCACTGAGCCATCTCTCCCGCAGACCCTATTGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGTGCTCTTAACCACTGAGCCATCTCTCCCGCAGACCCTATTGCAA  339

seq1  CCCTCTTCATCTGTCCCTTTGTCATACATGTGACTTTGTTTCTATGTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTCATCTGTCCCTTTGTCATACATGTGACTTTGTTTCTATGTCAG  389

seq1  GTGCTTTGGTGAATTAAAGATTATGCTTACAGTATCTTTCTCTGTTTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTTGGTGAATTAAAGATTATGCTTACAGTATCTTTCTCTGTTTCAT  439

seq1  AACTGTTAACTTTTTAGCACATAAACAAGTAGCCAACACTACAAATCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTTAACTTTTTAGCACATAAACAAGTAGCCAACACTACAAATCTTG  489

seq1  TCTTTACTCTGCCAGTGTGAACACGCCAGAGGGTAAACATGAGGCCTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACTCTGCCAGTGTGAACACGCCAGAGGGTAAACATGAGGCCTCTT  539

seq1  TTTGGTTGTTTAGTTAATTCAGACCTAGGCCTAGTCAAACCGAAGGACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTGTTTAGTTAATTCAGACCTAGGCCTAGTCAAACCGAAGGACTG  589

seq1  AGAGAGCAAATACTGAGCACTCATGTCTTTGATATCTGGGCTATGCCAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGCAAATACTGAGCACTCATGTCTTTGATATCTGGGCTATGCCAAG  639

seq1  TATTATATGTATTATATGTATTTTGTATCTTTAAAACTTCTAAGATAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATATGTATTATATGTATTTTGTATCTTTAAAACTTCTAAGATAAAT  689

seq1  GTTATGAGTGTTCTTTCAGAGAAAGTTGTACTCCCTATTGTTCAAGTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGAGTGTTCTTTCAGAGAAAGTTGTACTCCCTATTGTTCAAGTTTC  739

seq1  CATCCGAGATTAAGCAGTAATTATATCCAGGCTGTTTAACTGGTAAGTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCGAGATTAAGCAGTAATTATATCCAGGCTGTTTAACTGGTAAGTTC  789

seq1  ATACTTTAAGCAAGACCTTCTTTCTTTCTTTCGTTTGTTTGTTTGTTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTAAGCAAGACCTTCTTTCTTTCTTTCGTTTGTTTGTTTGTTTGT  839

seq1  TTGTTTGTTTGTTTGTTTTTTACTCCTACTAAATCTGCTCTGTTCTGCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTGTTTGTTTTTTACTCCTACTAAATCTGCTCTGTTCTGCAA  889

seq1  TGTCCTGCGGCCAATATATTTAGTCTATGCCTTGAGACTGTTAAGAATAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGCGGCCAATATATTTAGTCTATGCCTTGAGACTGTTAAGAATAT  939

seq1  CTTGTTCTATGCTAAAGTAACTGTTTTTTTTTCAATTTATGTTACAAGGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCTATGCTAAAGTAACTGTTTTTTTTTCAATTTATGTTACAAGGT  989

seq1  TAGTTAGCACTTCACCAGCCTTTAAAATTGTTCCATGCATATGAAAATAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAGCACTTCACCAGCCTTTAAAATTGTTCCATGCATATGAAAATAA  1039

seq1  ACAAGATATAAACCAGTACAATCCAGTCACAGTTTTTAAAATTGCTATAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATATAAACCAGTACAATCCAGTCACAGTTTTTAAAATTGCTATAT  1089

seq1  ACTGAAATCCTTTCAGAAAAGAAGAGATGGAAATAAAAACATAGCTTCCA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAATCCTTTCAGAAAAGAAGAGATGGAAATAAAAACATAGCTTCCA  1139

seq1  TTAGGAAGCCTAGAAAGTGAATTC  1174
      ||||||||||||||||||||||||
seq2  TTAGGAAGCCTAGAAAGTGAATTC  1163

seq1: chr8_45088001_45089114
seq2: B6Ng01-119B11.g_70_1173

seq1  GAATTCATATCCATCATCTCTATTTTGCAGAATTTAACTTGTTTTGGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATCCATCATCTCTATTTTGCAGAATTTAACTTGTTTTGGTTT  50

seq1  TGGCTGTAACAAAGGATCCTAGGAATATTCACAATCTGGGTGCTGAGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTAACAAAGGATCCTAGGAATATTCACAATCTGGGTGCTGAGACA  100

seq1  TTTGAACTTTTGGGGAACCCTCTCTGGTTTCCAGATGGTTGCATTCCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAACTTTTGGGGAACCCTCTCTGGTTTCCAGATGGTTGCATTCCAGT  150

seq1  GGTACCTCCATACAATATACTAGTGTCCATAGTCAACTTATTTCGGACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCTCCATACAATATACTAGTGTCCATAGTCAACTTATTTCGGACAT  200

seq1  CTTTTTTGTTTGTTATATTTTAATTGCCCTTTCTCTCAACAGATGGCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTGTTTGTTATATTTTAATTGCCCTTTCTCTCAACAGATGGCTTT  250

seq1  GTGGGATAAAAAAGTTTAATATTTTCTGTTTTGTTAATTGTTCTGTATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGATAAAAAAGTTTAATATTTTCTGTTTTGTTAATTGTTCTGTATAA  300

seq1  TTTTATATATGTATACAGTATAATGCTTAGCATGCCTAAAGTTGGTTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATATATGTATACAGTATAATGCTTAGCATGCCTAAAGTTGGTTTAT  350

seq1  TATCTCCATTCCCAGTATTGTTCCAGTTCTCACTCCAAATATCTCTACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCCATTCCCAGTATTGTTCCAGTTCTCACTCCAAATATCTCTACCT  400

seq1  ATCATAATAGCAGTATGTTCTCTTTGTTTCTCAAGTATGAAGTACCAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAATAGCAGTATGTTCTCTTTGTTTCTCAAGTATGAAGTACCAGAA  450

seq1  AAATCTATTAACATACATTTCCAACTTTTTCCTTTTTTGGTTCTTTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTATTAACATACATTTCCAACTTTTTCCTTTTTTGGTTCTTTTTCT  500

seq1  GTTGACATAATTGAATCCAAGTATTGTGATTGGATACTTTTAATTGGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACATAATTGAATCCAAGTATTGTGATTGGATACTTTTAATTGGTCC  550

seq1  TTACTCCATTTATCCTTTTTTTTTCAGATCCATATCAGTGTTATTTATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCCATTTATCCTTTTTTTTTCAGATCCATATCAGTGTTATTTATAA  600

seq1  ACATATTAGCTGCATTTATAAACCTGGTCCCTGGTCACAAATGTTATATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTAGCTGCATTTATAAACCTGGTCCCTGGTCACAAATGTTATATA  650

seq1  GCTCAAAAAGATTTCCTTTTAAAAATGATTCTATGAAGGGCTACTTTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAAAAGATTTCCTTTTAAAAATGATTCTATGAAGGGCTACTTTTGC  700

seq1  TTGTAGATTCAAATTTTTATGGAAAACTCTCTTCCACAGAAAAGGAATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGATTCAAATTTTTATGGAAAACTCTCTTCCACAGAAAAGGAATTG  750

seq1  GGTAAGAATATCAATGACAAGACACAAAACACCATTGTATTTGTAAATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGAATATCAATGACAAGACACAAAACACCATTGTATTTGTAAATTA  800

seq1  CATGCTTCAAGGGCTACAACATTACTACATCAAATTGCTAGCCAGTTTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTCAAGGGCTACAACATTACTACATCAAATTGCTAGCCAGTTTCT  850

seq1  AGACTCTTATGTTCATCAGGGATAGTAACAGTTTGAAGACCTTTACGGTC  900
      |||||| ||||||||||| ||||||||||||||||||||||||||||| |
seq2  AGACTC-TATGTTCATCA-GGATAGTAACAGTTTGAAGACCTTTACGGGC  898

seq1  TGTATGCCACCCTGTGAATGGACTATGTTTCAGTCATCACAAAACTTGCT  950
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGTATGCCACCCTGTG-ATGGACTATGTTTCAGTCATCACAAAACTTGCT  947

seq1  CTTTACAAAGCCTGAAACACTGAATCAATAGAGGAATTCTAAACTATGCA  1000
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTTTACAAAGCCTGAAACACTGAATCAATAGAGG-ATTCTAAACTATGCA  996

seq1  GATGTCCGTACCCTTATTATCTAATGATGAGAATCTCTGGGAATACTGCC  1050
      ||||| ||||||| |||||||| |||||||| ||||||||| ||||||||
seq2  GATGT-CGTACCC-TATTATCT-ATGATGAGGATCTCTGGG-ATACTGCC  1042

seq1  AATGTGTGGGTATTTCATACCTGCTGTAAAATTGATCCTGAAGCTCAGCC  1100
       ||| ||||||| |||||||||||||||||| ||||||||||||||||||
seq2  -ATGGGTGGGTA-TTCATACCTGCTGTAAAA-TGATCCTGAAGCTCAGCC  1089

seq1  -AGAGCTGAGGACTA  1114
       ||| ||||||||||
seq2  AAGACCTGAGGACTA  1104