BAC Information

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BAC

Clone NameB6Ng01-119I01
Chromosome8 (Build37)
Map Location 103,679,209 - 103,767,953
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042078, LOC100042086, LOC100042092, LOC384895
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119I01.bB6Ng01-119I01.g
ACCDH923698DH923699
length1,1721,173
definitionDH923698|Mus musculus domesticus DNA, BAC clone: B6Ng01-119I01, 5' end.DH923699|Mus musculus domesticus DNA, BAC clone: B6Ng01-119I01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,766,785 - 103,767,953)(103,679,209 - 103,680,404)
sequence
gaattctatccttctaaaaatgtgttccaataggagctgactatacagct
cagtgaggagaacacttacctagcaaacataaggtcctaggttcctgggt
tctactcttagaacttaaaatcagtacttgagacatggtgacagaaggat
ctgctcaaggccatctttggctgtacaatgacctcaaggccagaccgggg
tacttgaggccctatcctaagaagatgaattccagttatcattgtcatca
gtttgtgtgccatgcttgcttacttgcttgccatatcactcacccccccc
agtgatataattttaagacatatctttaacaatgaacagtaatgctatgc
ttgctcctaaacacaataattagttcaagtattaggtaattttaaatttg
agaagatattatagtttatttaattttatgttttaatgtttatgtaatta
tgtgcttgcctaagagagaaaatttagtgaaccctttagcttttcattgc
catttacagaaatctctagccttatttctagaacactgggtactgactca
ggtattcttgagtatagatgatagcagaatagacttttctaatgagactg
tagagtctccagatattttaaaattgcagtgacattagcatggatgatgt
ccctgcctagtattctgtaagatagatgccaggttgggttagaggcctgg
ttgggaaatcattatattaacatgggaaatagcaatggtcttaaagcaaa
acacactttgaaagtaaagcaggttaactgcataagccaaatccaggaat
gttgactcagaactttatacacaaaatgaagataaaccctgtatatttta
ttgttaataaagatggatattagacctgttttcaaactatcatctatgcc
agaaggcattaacttagtgattaaaaccatgaagtgttaacttagtggag
tggtgagcattgttaactgagatataaatcactaaaatgaacatgagcta
atggacgggggtgttatatcatatttactgattcaaaatatacatggaat
tagccacaggtggtggaaggttatggaatctagaataatacctgcacgat
tcccttctggtgcaaacagaacacatttggatcccaagggttattctaac
gagtagctggaatttcaattca
gaattcccaagtaaaataataaaatatgattctactttcttttttctatt
tcataagcatgggttcttttttaagttccccctaccagcaaaacagtcaa
ttttctaggaaaaatttgaaaacaacaaaatgtctcttattgactttatg
gcttagaaattggcagacatgggattttcctcatgtgttaaatttgtttt
aaaaatctccctttttacctttttaatgtttatttttattttatgtgcat
tggtgttttgcctgcatatatttctgtatgagggtgtttaatcacctgga
atgggaattatcagcaagtatgaagggctatgccaatgttgggacttgaa
cccagatcctctgagagagcaaccagtgctcttaaccattgagccacctc
tctaaccccatcctcctctactaaattttaatctatagaaatattgacaa
aatgaggaaatagcaatacattcatttttttcccaattttctggaaaagt
attgaatcccttattcaatttaactctccctttgctgtgtcctggtttga
gtgtataaacataaaaaacacaactttctttaagatgttcatagtcagag
gacagatcaggaggggaataacaactgcaatatatatatatatatatata
tatttacacacacacacacacatacacacacacacacacacacacacaca
cacacacacacacacacacacacatatatatatatatatatatatatata
tatatatatatatatataaatgaaagaataataagacaaagttgttcata
gttgagtgggaagttactgatttataaatgacaacccatgaagaaaatat
aaattattgaactaaataaaatataatcctctgagattatgaacatgttt
tttttcctcaatttccaaatattttgacttttcggaaaactgtccctggc
ctaatagctccctagccattttccacagtcacatgacagttcattgtata
attggaaaaagaaattagttaagaattctcttacacatcagttgaaaata
tcttccaggctctttccttcaagctgaatcaatgctgactacccagtaac
tgtcaccctaaattatcggggaattgcttagctctgaggccgattggtat
atgtatctatatcatgcctcaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_103766785_103767953
seq2: B6Ng01-119I01.b_45_1216 (reverse)

seq1  TGAATTG-AATTTCAGCTACTCGTTAGAATAAACCTTGTGAT-CAAATGT  48
      ||||||| |||| ||||||||||||||||||| ||||| ||| |||||||
seq2  TGAATTGAAATTCCAGCTACTCGTTAGAATAACCCTTGGGATCCAAATGT  50

seq1  GTCTGGTTTGCAACCAGAAGGG-ATCGTGCAGGTATTATTCTAGATTTCT  97
      ||   |||||| |||||||||| |||||||||||||||||||||| ||| 
seq2  GTTCTGTTTGC-ACCAGAAGGGAATCGTGCAGGTATTATTCTAGA-TTCC  98

seq1  ATAACTTTC--ACACTTGT-GCTAATTTCATGTATTATTTTGAATCAGTA  144
      ||||| |||   ||| ||| ||||||| |||||| |||||||||||||||
seq2  ATAACCTTCCACCACCTGTGGCTAATTCCATGTA-TATTTTGAATCAGTA  147

seq1  AATATGATATTAACA-CCCCGTTCATTAGCTCATGTTCATTTTAGTGATT  193
      ||||||||| ||||| |||||| |||||||||||||||||||||||||||
seq2  AATATGATA-TAACACCCCCGTCCATTAGCTCATGTTCATTTTAGTGATT  196

seq1  TATTATCTCAGTTAACAAATGCTCA-CACT-CACTAAGTTAACACTTCAT  241
      || ||||||||||||| |||||||| |||| |||||||||||||||||||
seq2  TA-TATCTCAGTTAAC-AATGCTCACCACTCCACTAAGTTAACACTTCAT  244

seq1  GGTTTTATTCACTAAGTTAATGCCTTCTGGCATAGATGATAGTTTGAAAA  291
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTAATCACTAAGTTAATGCCTTCTGGCATAGATGATAGTTTGAAAA  294

seq1  CAGGTCTAATATCCATCTTTATTAACAATAAAATATACAGGGTTTATCTT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCTAATATCCATCTTTATTAACAATAAAATATACAGGGTTTATCTT  344

seq1  CATTTTGTGTATAAAGTTCTGAGTCAACATTCCTGGATTTGGCTTATGCA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGTGTATAAAGTTCTGAGTCAACATTCCTGGATTTGGCTTATGCA  394

seq1  GTTAACCTGCTTTACTTTCAAAGTGTGTTTTGCTTTAAGACCATTGCTAT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACCTGCTTTACTTTCAAAGTGTGTTTTGCTTTAAGACCATTGCTAT  444

seq1  TTCCCATGTTAATATAATGATTTCCCAACCAGGCCTCTAACCCAACCTGG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCATGTTAATATAATGATTTCCCAACCAGGCCTCTAACCCAACCTGG  494

seq1  CATCTATCTTACAGAATACTAGGCAGGGACATCATCCATGCTAATGTCAC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATCTTACAGAATACTAGGCAGGGACATCATCCATGCTAATGTCAC  544

seq1  TGCAATTTTAAAATATCTGGAGACTCTACAGTCTCATTAGAAAAGTCTAT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATTTTAAAATATCTGGAGACTCTACAGTCTCATTAGAAAAGTCTAT  594

seq1  TCTGCTATCATCTATACTCAAGAATACCTGAGTCAGTACCCAGTGTTCTA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTATCATCTATACTCAAGAATACCTGAGTCAGTACCCAGTGTTCTA  644

seq1  GAAATAAGGCTAGAGATTTCTGTAAATGGCAATGAAAAGCTAAAGGGTTC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAGGCTAGAGATTTCTGTAAATGGCAATGAAAAGCTAAAGGGTTC  694

seq1  ACTAAATTTTCTCTCTTAGGCAAGCACATAATTACATAAACATTAAAACA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATTTTCTCTCTTAGGCAAGCACATAATTACATAAACATTAAAACA  744

seq1  TAAAATTAAATAAACTATAATATCTTCTCAAATTTAAAATTACCTAATAC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTAAATAAACTATAATATCTTCTCAAATTTAAAATTACCTAATAC  794

seq1  TTGAACTAATTATTGTGTTTAGGAGCAAGCATAGCATTACTGTTCATTGT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTAATTATTGTGTTTAGGAGCAAGCATAGCATTACTGTTCATTGT  844

seq1  TAAAGATATGTCTTAAAATTATATCACTGGGGGGGGTGAGTGATATGGCA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATATGTCTTAAAATTATATCACTGGGGGGGGTGAGTGATATGGCA  894

seq1  AGCAAGTAAGCAAGCATGGCACACAAACTGATGACAATGATAACTGGAAT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTAAGCAAGCATGGCACACAAACTGATGACAATGATAACTGGAAT  944

seq1  TCATCTTCTTAGGATAGGGCCTCAAGTACCCCGGTCTGGCCTTGAGGTCA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTCTTAGGATAGGGCCTCAAGTACCCCGGTCTGGCCTTGAGGTCA  994

seq1  TTGTACAGCCAAAGATGGCCTTGAGCAGATCCTTCTGTCACCATGTCTCA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACAGCCAAAGATGGCCTTGAGCAGATCCTTCTGTCACCATGTCTCA  1044

seq1  AGTACTGATTTTAAGTTCTAAGAGTAGAACCCAGGAACCTAGGACCTTAT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTGATTTTAAGTTCTAAGAGTAGAACCCAGGAACCTAGGACCTTAT  1094

seq1  GTTTGCTAGGTAAGTGTTCTCCTCACTGAGCTGTATAGTCAGCTCCTATT  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTAGGTAAGTGTTCTCCTCACTGAGCTGTATAGTCAGCTCCTATT  1144

seq1  GGAACACATTTTTAGAAGGATAGAATTC  1169
      ||||||||||||||||||||||||||||
seq2  GGAACACATTTTTAGAAGGATAGAATTC  1172

seq1: chr8_103679209_103680404
seq2: B6Ng01-119I01.g_68_1240

seq1  GAATTCCCAAGTAAAATAATAAAATATGATTCTACTTTCTTTTTTCTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAGTAAAATAATAAAATATGATTCTACTTTCTTTTTTCTATT  50

seq1  TCATAAGCATGGGTTCTTTTTTAAGTTCCCCCTACCAGCAAAACAGTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAGCATGGGTTCTTTTTTAAGTTCCCCCTACCAGCAAAACAGTCAA  100

seq1  TTTTCTAGGAAAAATTTGAAAACAACAAAATGTCTCTTATTGACTTTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAGGAAAAATTTGAAAACAACAAAATGTCTCTTATTGACTTTATG  150

seq1  GCTTAGAAATTGGCAGACATGGGATTTTCCTCATGTGTTAAATTTGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGAAATTGGCAGACATGGGATTTTCCTCATGTGTTAAATTTGTTTT  200

seq1  AAAAATCTCCCTTTTTACCTTTTTAATGTTTATTTTTATTTTATGTGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCTCCCTTTTTACCTTTTTAATGTTTATTTTTATTTTATGTGCAT  250

seq1  TGGTGTTTTGCCTGCATATATTTCTGTATGAGGGTGTTTAATCACCTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTTTTGCCTGCATATATTTCTGTATGAGGGTGTTTAATCACCTGGA  300

seq1  ATGGGAATTATCAGCAAGTATGAAGGGCTATGCCAATGTTGGGACTTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAATTATCAGCAAGTATGAAGGGCTATGCCAATGTTGGGACTTGAA  350

seq1  CCCAGATCCTCTGAGAGAGCAACCAGTGCTCTTAACCATTGAGCCACCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGATCCTCTGAGAGAGCAACCAGTGCTCTTAACCATTGAGCCACCTC  400

seq1  TCTAACCCCATCCTCCTCTACTAAATTTTAATCTATAGAAATATTGACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACCCCATCCTCCTCTACTAAATTTTAATCTATAGAAATATTGACAA  450

seq1  AATGAGGAAATAGCAATACATTCATTTTTTTCCCAATTTTCTGGAAAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGAAATAGCAATACATTCATTTTTTTCCCAATTTTCTGGAAAAGT  500

seq1  ATTGAATCCCTTATTCAATTTAACTCTCCCTTTGCTGTGTCCTGGTTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATCCCTTATTCAATTTAACTCTCCCTTTGCTGTGTCCTGGTTTGA  550

seq1  GTGTATAAACATAAAAAACACAACTTTCTTTAAGATGTTCATAGTCAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATAAACATAAAAAACACAACTTTCTTTAAGATGTTCATAGTCAGAG  600

seq1  GACAGATCAGGAGGGGAATAACAACTGCAATATATATATATATATATATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGATCAGGAGGGGAATAACAACTGCAATATATATATATATATATATA  650

seq1  TATTTACACACACACACACACATACACACACACACACACACACACACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACACACACACACACACATACACACACACACACACACACACACACA  700

seq1  CACACACACACACACACACACACACATATATATATATATATATATATATA  750
      |||||||||||||||||||||||    |||||||||||||||||||||||
seq2  CACACACACACACACACACACAC----ATATATATATATATATATATATA  746

seq1  TATATATATATATATATATATAAATGAAAGAATAATAAGACAAAGTTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATAAATGAAAGAATAATAAGACAAAGTTGTT  796

seq1  CATAGTTGAGTGGGAAGTTACTGATTTATAAATGACAACCCATGGAGAAA  850
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CATAGTTGAGTGGGAAGTTACTGATTTATAAATGACAACCCATGAAGAAA  846

seq1  ATAT-AATTATTGAACTAAATAAAATTATAATCATCTGAGATTATGAACA  899
      |||| |||||||||||||||||||| ||||||| ||||||||||||||||
seq2  ATATAAATTATTGAACTAAATAAAA-TATAATCCTCTGAGATTATGAACA  895

seq1  TGTTTTTTTTCCTCAAATTTCCAAATATTTTGACTTTTCGGGAAACTGTC  949
      |||||||||||||| |||||||||||||||||||||||||| ||||||||
seq2  TGTTTTTTTTCCTC-AATTTCCAAATATTTTGACTTTTCGGAAAACTGTC  944

seq1  CCTGGCCTAATTGCTTCCTTAGCCATTTTCCAGCAGGTCACATGACAGTT  999
      ||||||||||| || ||| ||||||||||||| || ||||||||||||||
seq2  CCTGGCCTAATAGC-TCCCTAGCCATTTTCCA-CA-GTCACATGACAGTT  991

seq1  CATTGTATAATTGGACAAAG-AATTAGTTAAGAATTCTCTTAACACATCA  1048
      ||||||||||||||| |||| |||||||||||||||||||| ||||||| 
seq2  CATTGTATAATTGGAAAAAGAAATTAGTTAAGAATTCTCTT-ACACATC-  1039

seq1  AGTTGAAAATATCTTCCAGGTCCTTTCCTCCAAGCTG-ATCAATGCTGAC  1097
      ||||||||||||||||||||  ||||||| ||||||| ||||||||||||
seq2  AGTTGAAAATATCTTCCAGGCTCTTTCCTTCAAGCTGAATCAATGCTGAC  1089

seq1  TACACAGTACACTGTCCACTCTAAATTTATTCCGGTGATTTGTCTTAGCT  1147
      ||| ||||| ||||| ||| ||||| ||||  ||| || ||| |||||||
seq2  TACCCAGTA-ACTGT-CACCCTAAA-TTAT--CGGGGAATTG-CTTAGCT  1133

seq1  CTGAGTGCCGCTATGGTTAATTGGTAATCTATATTCACTGGGCCTCACA  1196
      ||||| |||| | ||||  ||  || ||||||| |||    ||||||||
seq2  CTGAG-GCCGAT-TGGT--ATATGT-ATCTATA-TCA---TGCCTCACA  1173