BAC Information

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BAC

Clone NameB6Ng01-120C03
Chromosome8 (Build37)
Map Location 100,507,532 - 100,508,735
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC333331, LOC546090, LOC636859, EG384885
Downstream geneLOC100041173, EG636915
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120C03.bB6Ng01-120C03.g
ACCDH924157DH924158
length1,2541,181
definitionDH924157|Mus musculus domesticus DNA, BAC clone: B6Ng01-120C03, 5' end.DH924158|Mus musculus domesticus DNA, BAC clone: B6Ng01-120C03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaatcatgataaaagcaatctacagcaaacca
gtagccaacatcaaagttaatggtaagaagctggaagcaatcccactaaa
atcagggactagacaaggctgtctactctctgcctacctattcaacatgg
tacttaaagtcctagccagagcgattagacaacaaaaggagatcaagggg
atacaaattggaaaggaagaagtcaaaatatcattttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaattcctaagcc
tgataaacagcttcaatgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctgtacacaaaggataaacaggctgagaaagaaattaa
ggaaacaacactcatatcaatagtcacaaataatataaaataccttggca
tgactctaacaaaggaagtgaaagatctgtatgataagaacttcaagtct
ctgaagaaagaaattaaagatctcagaagatggaaagatcccccatgctc
atggattggcaggatcaatatagtaaaaatatatagtaaagatatagtaa
agtatatcttaccaaaagcaatttacagattcaacacaatccccatcaaa
attccaactcaattcttcaatgaattagaaagagcaatcggcagattcat
ctggaataacaaaaaacataggacagcaaaaactcttctcaaggataaaa
gtacctctggtggaatcaccatgcctgacctaaagctgtactacagagca
attgtgataaaaactgaatggtactggtatagcaacagacaagtagacca
atggaacagaatcgaagacccagagatgaacccacacacctatggtcact
tgatctttgacaagggagctaaaaccatccagtggaaaaagacagcatat
taaacaaatggtgctggaacactggcaggtttcatgtagaagaatgcaaa
ttgatccattcctatctctgtactaggtcaaatctagtggattaggactc
cacataaaacagaagacactgaaatagggagaaagtagaaaagctgaagg
aatgggtacagggggaaaattctgatagaacagcatgcttgtgctgttag
gatcgagaatcgataatggaacctcataaagttgcaagcgtcgcagtcaa
gaacggtcataagaccaaaccctccacagatggaagggatctttacctat
tcta
gaattcatgaatcttttgctacaacatcaggtcattaaaaataaaaatgg
ttcaatatagtctctgtgtcacacatcaataaaataacatttactgttta
ttgcatttaatagataaacattcaaataaatatgcacttttctgataatt
ttccttttaaaatagttatttttagcagtaaaatgaatctttaattgaat
taaaaagcattgatacaagattggacttaatccagtgtaaaataaaaatt
agagttatgtttcctgttagcaacctctgttcgcattagtgtaagttaaa
tgctctttaagaataagcttatatctagtccattttaatgttggaaggat
gcagagactaattatgacaattacagtgaattgtcacattacaatgatgc
tttcagtttttctactgttttctaaagattttcacagccatccacgtgct
ctgtcttcatttgtttctcttcatccttttataccaaatatagaaagaat
agattgctagaattcacggaactggcttttaattaattttataatcttcc
tatattctgactgtttggctatttgtgtgagtgtgtgccctttcttcagg
gtgtcatcagtgcctcggtttctccaaacaggaaatgcaaggtgttcctc
tggtcatccatccatgctgtacaataaaaacaccatgaactgaaatgtct
atgtgtccaactaaagtagtgttacagaaactcaggcaatattttcatgt
gatcatagctacttgagacatttcctgagtcagttcttgatagagattca
atgtcaagaccatagactttactggagtctttgatgatagagacaaaaca
aacaaacaaaagaaagaaacaaaaaaacaacaaaaaaaaaaacccactaa
ttttgactctattgagggagtaccctcataacaatagtcagagtggaagg
aatacaggtttgtggagggaacatggaatagggataacattgaaatataa
ataataaataaccaatataaaagaaagttcaaatgtgagtgctccagggg
catgaatataaaatatacaaggagaagaataagaaaaatttggtgaaaaa
acttatatcaaatactattgcaactgttgtcagggaattccttaatataa
attcaggaataatcataacgagagaatttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_100507532_100508735
seq2: B6Ng01-120C03.g_66_1246

seq1  GAATTCATGAATCTTTTGCTACAACATCAGGTCATTAAAAATAAAAATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAATCTTTTGCTACAACATCAGGTCATTAAAAATAAAAATGG  50

seq1  TTCAATATAGTCTCTGTGTCACACATCAATAAAATAACATTTACTGTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATATAGTCTCTGTGTCACACATCAATAAAATAACATTTACTGTTTA  100

seq1  TTGCATTTAATAGATAAACATTCAAATAAATATGCACTTTTCTGATAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTTAATAGATAAACATTCAAATAAATATGCACTTTTCTGATAATT  150

seq1  TTCCTTTTAAAATAGTTATTTTTAGCAGTAAAATGAATCTTTAATTGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTAAAATAGTTATTTTTAGCAGTAAAATGAATCTTTAATTGAAT  200

seq1  TAAAAAGCATTGATACAAGATTGGACTTAATCCAGTGTAAAATAAAAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGCATTGATACAAGATTGGACTTAATCCAGTGTAAAATAAAAATT  250

seq1  AGAGTTATGTTTCCTGTTAGCAACCTCTGTTCGCATTAGTGTAAGTTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTATGTTTCCTGTTAGCAACCTCTGTTCGCATTAGTGTAAGTTAAA  300

seq1  TGCTCTTTAAGAATAAGCTTATATCTAGTCCATTTTAATGTTGGAAGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTTAAGAATAAGCTTATATCTAGTCCATTTTAATGTTGGAAGGAT  350

seq1  GCAGAGACTAATTATGACAATTACAGTGAATTGTCACATTACAATGATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGACTAATTATGACAATTACAGTGAATTGTCACATTACAATGATGC  400

seq1  TTTCAGTTTTTCTACTGTTTTCTAAAGATTTTCACAGCCATCCACGTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTTTTTCTACTGTTTTCTAAAGATTTTCACAGCCATCCACGTGCT  450

seq1  CTGTCTTCATTTGTTTCTCTTCATCCTTTTATACCAAATATAGAAAGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTCATTTGTTTCTCTTCATCCTTTTATACCAAATATAGAAAGAAT  500

seq1  AGATTGCTAGAATTCACGGAACTGGCTTTTAATTAATTTTATAATCTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGCTAGAATTCACGGAACTGGCTTTTAATTAATTTTATAATCTTCC  550

seq1  TATATTCTGACTGTTTGGCTATTTGTGTGAGTGTGTGCCCTTTCTTCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCTGACTGTTTGGCTATTTGTGTGAGTGTGTGCCCTTTCTTCAGG  600

seq1  GTGTCATCAGTGCCTCGGTTTCTCCAAACAGGAAATGCAAGGTGTTCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCATCAGTGCCTCGGTTTCTCCAAACAGGAAATGCAAGGTGTTCCTC  650

seq1  TGGTCATCCATCCATGCTGTACAATAAAAACACCATGAACTGAAATGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCATCCATCCATGCTGTACAATAAAAACACCATGAACTGAAATGTCT  700

seq1  ATGTGTCCAACTAAAGTAGTGTTACAGAAACTCAGGCAATATTTTCATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCCAACTAAAGTAGTGTTACAGAAACTCAGGCAATATTTTCATGT  750

seq1  GATCATAGCTACTTGAGACATTTCCTGAGTCAGTTCTTGATAGAGATTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATAGCTACTTGAGACATTTCCTGAGTCAGTTCTTGATAGAGATTCA  800

seq1  ATGTCAAGACCATAGACTTTACTGGAGTCTTTGATGATAAGAGACAAAAA  850
      |||||||||||||||||||||||||||||||||||||| |||||| ||||
seq2  ATGTCAAGACCATAGACTTTACTGGAGTCTTTGATGAT-AGAGAC-AAAA  848

seq1  CAAAACAAAACAAAAGAAAAGAAAACAAAAAAAAACAAACAAAAAAAAAA  900
      ||||   ||||||||||||   ||||||||||| |     | ||||||||
seq2  CAAA--CAAACAAAAGAAA--GAAACAAAAAAACA-----ACAAAAAAAA  889

seq1  AAACCCACTAAATTTTGACTCATATTGAGGGAGTACCCTCATAACAATAG  950
      ||||||||| ||||||||||| ||||||||||||||||||||||||||||
seq2  AAACCCACT-AATTTTGACTC-TATTGAGGGAGTACCCTCATAACAATAG  937

seq1  TCAGAGTGGAAGGGAATACAGGGTTTGTGGAGGGGAAACATGGATAGGGG  1000
      ||||||||||| |||||||| |||||||||||||  ||||||||   |||
seq2  TCAGAGTGGAA-GGAATACA-GGTTTGTGGAGGG--AACATGGAATAGGG  983

seq1  ATAACATTTGAAATATAAATAAATAAAATAACCAATATAAAAGAAAAGTT  1050
      |||||| |||||||||||||||   |||||||||||||||||| ||||||
seq2  ATAACA-TTGAAATATAAATAA--TAAATAACCAATATAAAAG-AAAGTT  1029

seq1  ACAAATGTGAGTGCTTCTATGGTGCATGAATATAAAATATACTAGGTAGA  1100
       |||||||||||||| |   || ||||||||||||||||||| ||| |||
seq2  -CAAATGTGAGTGCTCC--AGGGGCATGAATATAAAATATACAAGG-AGA  1075

seq1  AGAGTAAGACAAATTTTGTTGAACAATACATTTATATCAAATACTA-TGC  1149
      ||| ||||| ||| |||| |||| ||   | ||||||||||||||| |||
seq2  AGAATAAGA-AAAATTTGGTGAAAAA---ACTTATATCAAATACTATTGC  1121

seq1  AACTGTTGTCCAGGGGA--CATTGTCTATAAAAT-----ATAAAATTTCA  1192
      ||||||||| ||||| |  | ||   |||||| |     ||||   |   
seq2  AACTGTTGT-CAGGGAATTCCTT-AATATAAATTCAGGAATAATCATAAC  1169

seq1  GGGTGAATTTAA  1204
      | | ||||||||
seq2  GAGAGAATTTAA  1181