BAC Information

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BAC

Clone NameB6Ng01-121J10
Chromosome8 (Build37)
Map Location 26,062,293 - 26,202,959
singlet/doubletdoublet
Overlap geneAdam9, Tm2d2, Htra4, Plekha2
Upstream geneZmat4, 1810011O10Rik, Indol1, Indo, Adam18, Adam3, Adam5, Adam32
Downstream geneLOC100042390, Tacc1, LOC670822, LOC100040998, Fgfr1, D030041N04Rik, LOC100042416, Whsc1l1, Ppapdc1, Bag4, Lsm1, Star, Ash2l, Kcnu1, Hgsnat, 4930444A02Rik, Fnta, Hook3, 1700047A11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121J10.bB6Ng01-121J10.g
ACCDH925234DH925235
length1,03078
definitionDH925234|Mus musculus domesticus DNA, BAC clone: B6Ng01-121J10, 5' end.DH925235|Mus musculus domesticus DNA, BAC clone: B6Ng01-121J10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,062,293 - 26,062,906)(26,202,882 - 26,202,959)
sequence
gaattctctaagagtgaacaattaaaattaactacacacagaaaaaaagc
actcgtctgcaggctttctgtagctgacttgaaacagaggcttggtttca
atcattaaaaagaaacaggattcccctccaagatccatgactttcctagc
catgggtagctgactaggtttccagtataggtatgatttccatccttcag
agtgggtatgaagcccaaatgacattttattcaactagtacaagccctaa
caacattctaaatatctgtccttacacccactgatactgtagtcctcacc
cttcatcaaagaaagatgccctggcaccacacagagacctttacagaaag
ccacactgacgtggaaacatggagaacaagctccacgcgatgcccaactg
attcatttacaacacaactcctgcaccaaggctcaggaatcactgtagag
gcggaagcagacagaatggaagagctagagccacggttcttaacctgtgg
cctgtgacccctcgggtttgaaatgaccttttcacagggtcacctaagac
cactggaagatacagatatttatattatgattcatagcagtggtaaaatt
atagttatgaggtagtaacaaaaataattttatgagtgggggtcactaca
acataaggagttgtattaaagtgtcatggcattggaattaggagtttgtt
gtgagactgtgtctcctataaatgttagaagctacatctatgaagtctga
tcaacctgactgcctaaatataacctgaataaggatgacatccatataca
tgctacatgaaaggggagcctcatgagaccatcagataaagaactttagg
caactagaagaatgctcagaaacagtcttccccagggaaggatacaggag
ttggttatccaacaccacaaatgggtcagcccagaaaacatacacacaag
taacaggattgaactacgtattaggtatagatagataacacatacacaca
tgacagcatgaagaaaagagatcatgagtt
cctgcttagggaggcctctttgctgctctttaggctgagacaggtgggtc
ggtggtggttgagggattgggggtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_26062293_26062906
seq2: B6Ng01-121J10.b_48_661

seq1  GAATTCTCTAAGAGTGAACAATTAAAATTAACTACACACAGAAAAAAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAAGAGTGAACAATTAAAATTAACTACACACAGAAAAAAAGC  50

seq1  ACTCGTCTGCAGGCTTTCTGTAGCTGACTTGAAACAGAGGCTTGGTTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGTCTGCAGGCTTTCTGTAGCTGACTTGAAACAGAGGCTTGGTTTCA  100

seq1  ATCATTAAAAAGAAACAGGATTCCCCTCCAAGATCCATGACTTTCCTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTAAAAAGAAACAGGATTCCCCTCCAAGATCCATGACTTTCCTAGC  150

seq1  CATGGGTAGCTGACTAGGTTTCCAGTATAGGTATGATTTCCATCCTTCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGTAGCTGACTAGGTTTCCAGTATAGGTATGATTTCCATCCTTCAG  200

seq1  AGTGGGTATGAAGCCCAAATGACATTTTATTCAACTAGTACAAGCCCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTATGAAGCCCAAATGACATTTTATTCAACTAGTACAAGCCCTAA  250

seq1  CAACATTCTAAATATCTGTCCTTACACCCACTGATACTGTAGTCCTCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTCTAAATATCTGTCCTTACACCCACTGATACTGTAGTCCTCACC  300

seq1  CTTCATCAAAGAAAGATGCCCTGGCACCACACAGAGACCTTTACAGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCAAAGAAAGATGCCCTGGCACCACACAGAGACCTTTACAGAAAG  350

seq1  CCACACTGACGTGGAAACATGGAGAACAAGCTCCACGCGATGCCCAACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTGACGTGGAAACATGGAGAACAAGCTCCACGCGATGCCCAACTG  400

seq1  ATTCATTTACAACACAACTCCTGCACCAAGGCTCAGGAATCACTGTAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTACAACACAACTCCTGCACCAAGGCTCAGGAATCACTGTAGAG  450

seq1  GCGGAAGCAGACAGAATGGAAGAGCTAGAGCCACGGTTCTTAACCTGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGAAGCAGACAGAATGGAAGAGCTAGAGCCACGGTTCTTAACCTGTGG  500

seq1  CCTGTGACCCCTCGGGTTTGAAATGACCTTTTCACAGGGTCACCTAAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGACCCCTCGGGTTTGAAATGACCTTTTCACAGGGTCACCTAAGAC  550

seq1  CACTGGAAGATACAGATATTTATATTATGATTCATAGCAGTGGTAAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGAAGATACAGATATTTATATTATGATTCATAGCAGTGGTAAAATT  600

seq1  ATAGTTATGAGGTA  614
      ||||||||||||||
seq2  ATAGTTATGAGGTA  614

seq1: chr8_26202882_26202959
seq2: B6Ng01-121J10.g_70_147 (reverse)

seq1  CCCCACCCCCAATCCCTCAACCACCACCGACCCACCTGTCTCAGCCTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCCCCAATCCCTCAACCACCACCGACCCACCTGTCTCAGCCTAAA  50

seq1  GAGCAGCAAAGAGGCCTCCCTAAGCAGG  78
      ||||||||||||||||||||||||||||
seq2  GAGCAGCAAAGAGGCCTCCCTAAGCAGG  78