BAC Information

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BAC

Clone NameB6Ng01-122G20
Chromosome8 (Build37)
Map Location 114,094,807 - 114,243,549
singlet/doubletdoublet
Overlap geneZnrf1, Ldhd, Zfp1, Ctrb1, Bcar1
Upstream geneHydin, Vac14, BC060632, 2010004A03Rik, Sf3b3, Cog4, Fuk, St3gal2, Ddx19a, Ddx19b, Aars, Exosc6, Mrcl, 4930402E16Rik, 9430091E24Rik, Glg1, Rfwd3, LOC547023, Mlkl, Fa2h, Wdr59
Downstream geneCfdp1, Tmem170, Chst5, 4932417I16Rik, Gabarapl2, Adat1, Kars, Terf2ip, EG627828, LOC672498, LOC100042040, Cntnap4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122G20.bB6Ng01-122G20.g
ACCDH925853DH925854
length346900
definitionDH925853|Mus musculus domesticus DNA, BAC clone: B6Ng01-122G20, 5' end.DH925854|Mus musculus domesticus DNA, BAC clone: B6Ng01-122G20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,243,204 - 114,243,549)(114,094,807 - 114,095,700)
sequence
aaatctctgaaaccacatggtggctcatgcctttaatcccagcacttggg
aggcagaggctggcagatctctgagttctaggccagcctggtctacagag
tgagttccaggacagccaggcctacacagagaaactctgtctcaaaaaaa
aacaaaaagaaaaaagaaaaaaaaccacccataatgagatctgacgccct
cttctggtgtgtctgaagacagcagcagtatacttatttatagtaataaa
taaatcttaaaaaaaaaaaaagaaagaaagaaagaaaagctggtcataga
agcctaccatcaaatcaaggccctgccaactgggggtggggggtga
gaattcactttgtagaccaggctggcctcgaactcagaaatccacctgcc
tctgcctcccgagtgctgggattaaaggcgtacaccaccacacccggctt
tcaaaggggttttaggacttgaatttattcttctctgtgagctttcagag
gtaactatagttgatatctttctcattatttagaaagccatagaatcttg
actctcaaattattattaactctgattacagaggcattacaaattatttt
ttaatggctggagattggtgaagggatggaatggtggcaagtagtgagga
gagtgagaccgaaaggtgtagctcagaatatctttctctgcttactcttt
agttcttttttttttttaagatttatttatttattatatgtaagtacgcc
atagctgtcttcagactccccagaagagattcagttatcattacagatgg
ttgtgagccaccatgtggttgctgggatttgaactcagggccttcggaag
agcagtaggtgctcttaaccactgagccatctctccagccctcttcagtt
tcttaagggcatcagcgtatcagtgtttaaaacgtgagaagcatggtttt
gttttgtttttgttttgtttcagtgcgattaaacctgagaaaattattta
cattttgaaatgaaagacctcatgtttattccttttgaagctgtagtctc
tagggtttatgatcttttagtataatatttaaaggccagtgttgtatttc
cagcaacaaatggaaagaactggtgtgcgttcctttagctactaaaaaag
ttcacataaaaaagaaggttggcttttgccttaagtttcagagcttttag
ttcatagacattttgccccaatcccctttggggctatggcaaggcagtga

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_114243204_114243549
seq2: B6Ng01-122G20.b_54_399 (reverse)

seq1  TCACCCCCCACCCCCAGTTGGCAGGGCCTTGATTTGATGGTAGGCTTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCCCCACCCCCAGTTGGCAGGGCCTTGATTTGATGGTAGGCTTCTA  50

seq1  TGACCAGCTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTAAGATTTATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAGCTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTAAGATTTATTTA  100

seq1  TTACTATAAATAAGTATACTGCTGCTGTCTTCAGACACACCAGAAGAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATAAATAAGTATACTGCTGCTGTCTTCAGACACACCAGAAGAGGG  150

seq1  CGTCAGATCTCATTATGGGTGGTTTTTTTTCTTTTTTCTTTTTGTTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCAGATCTCATTATGGGTGGTTTTTTTTCTTTTTTCTTTTTGTTTTTT  200

seq1  TTTGAGACAGAGTTTCTCTGTGTAGGCCTGGCTGTCCTGGAACTCACTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGACAGAGTTTCTCTGTGTAGGCCTGGCTGTCCTGGAACTCACTCT  250

seq1  GTAGACCAGGCTGGCCTAGAACTCAGAGATCTGCCAGCCTCTGCCTCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACCAGGCTGGCCTAGAACTCAGAGATCTGCCAGCCTCTGCCTCCCA  300

seq1  AGTGCTGGGATTAAAGGCATGAGCCACCATGTGGTTTCAGAGATTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGGGATTAAAGGCATGAGCCACCATGTGGTTTCAGAGATTT  346

seq1: chr8_114094807_114095700
seq2: B6Ng01-122G20.g_65_964

seq1  GAATTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCC  50

seq1  TCTGCCTCCCGAGTGCTGGGATTAAAGGCGTACACCACCACACCCGGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCGAGTGCTGGGATTAAAGGCGTACACCACCACACCCGGCTT  100

seq1  TCAAAGGGGTTTTAGGACTTGAATTTATTCTTCTCTGTGAGCTTTCAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGGGTTTTAGGACTTGAATTTATTCTTCTCTGTGAGCTTTCAGAG  150

seq1  GTAACTATAGTTGATATCTTTCTCATTATTTAGAAAGCCATAGAATCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTATAGTTGATATCTTTCTCATTATTTAGAAAGCCATAGAATCTTG  200

seq1  ACTCTCAAATTATTATTAACTCTGATTACAGAGGCATTACAAATTATTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCAAATTATTATTAACTCTGATTACAGAGGCATTACAAATTATTTT  250

seq1  TTAATGGCTGGAGATTGGTGAAGGGATGGAATGGTGGCAAGTAGTGAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGGCTGGAGATTGGTGAAGGGATGGAATGGTGGCAAGTAGTGAGGA  300

seq1  GAGTGAGACCGAAAGGTGTAGCTCAGAATATCTTTCTCTGCTTACTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGACCGAAAGGTGTAGCTCAGAATATCTTTCTCTGCTTACTCTTT  350

seq1  AGTTCTTTTTTTTTTTTAAGATTTATTTATTTATTATATGTAAGTACGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTTTTTTTTTTTAAGATTTATTTATTTATTATATGTAAGTACGCC  400

seq1  ATAGCTGTCTTCAGACTCCCCAGAAGAGATTCAGTTATCATTACAGATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTGTCTTCAGACTCCCCAGAAGAGATTCAGTTATCATTACAGATGG  450

seq1  TTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGGCCTTCGGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGGCCTTCGGAAG  500

seq1  AGCAGTAGGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCTCTTCAG-T  549
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGCAGTAGGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCTCTTCAGTT  550

seq1  TCTTAAGGGCATCAGCGTATCAGTGTTTAAAACGTGAGAAGCATGGTTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAGGGCATCAGCGTATCAGTGTTTAAAACGTGAGAAGCATGGTTTT  600

seq1  GTTTTG-TTTTGTTTTGTTTCAGTGCGATTAAACCTGAGAAAATTA-TTA  647
      |||||| ||||||||||||||||||||||||||||||||||||||| |||
seq2  GTTTTGTTTTTGTTTTGTTTCAGTGCGATTAAACCTGAGAAAATTATTTA  650

seq1  CATTTTGAAATGAAAGACCTCATGGTTTATTCC-TTTGAAGCTGTAGTCT  696
      ||||||||||||||||||||||| ||||||||| ||||||||||||||||
seq2  CATTTTGAAATGAAAGACCTCAT-GTTTATTCCTTTTGAAGCTGTAGTCT  699

seq1  CTAGGGTTTATGATCTTTTAGTATATATTTTAAAGGCCAGTGTTGTATTT  746
      |||||||||||||||||||||||||   ||||||||||||||||||||||
seq2  CTAGGGTTTATGATCTTTTAGTATAATATTTAAAGGCCAGTGTTGTATTT  749

seq1  CCAGCAACAAATGGAAAGAACT-GTGTGCGTTCCTTTAGCTACATAAAAA  795
      |||||||||||||||||||||| |||||||||||||||||||| ||||||
seq2  CCAGCAACAAATGGAAAGAACTGGTGTGCGTTCCTTTAGCTAC-TAAAAA  798

seq1  AGTCCACAT-AAAAAGAA-GTTTGCTTTTGCCTTAAGTTTCAGAGCTTTT  843
      ||| ||||| |||||||| ||| |||||||||||||||||||||||||||
seq2  AGTTCACATAAAAAAGAAGGTTGGCTTTTGCCTTAAGTTTCAGAGCTTTT  848

seq1  AGTCCATAGTCATTTTGCCCC-ATTCCCTTTGGGCCTATGGCAAGGCAGT  892
      ||| ||||| ||||||||||| || ||||||||| |||||||||||||||
seq2  AGTTCATAGACATTTTGCCCCAATCCCCTTTGGGGCTATGGCAAGGCAGT  898

seq1  GA  894
      ||
seq2  GA  900