BAC Information

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BAC

Clone NameB6Ng01-122J15
Chromosome8 (Build37)
Map Location 68,995,028 - 68,995,761
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040967, March1, LOC100040986
Downstream gene1810029B16Rik, Tktl2, Npy5r, Npy1r, BC053440, LOC665453
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122J15.bB6Ng01-122J15.g
ACCDH925984DH925985
length916709
definitionDH925984|Mus musculus domesticus DNA, BAC clone: B6Ng01-122J15, 5' end.DH925985|Mus musculus domesticus DNA, BAC clone: B6Ng01-122J15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccataaattcattgtttttaatagctgaatagtactctattgtgt
aaatgtaccatatttattgtatccattcttctattgagggaaaccacggt
tcttttcagcttctggctattataaataaggctgctatgaacatagtgga
gcatatgtccttagtacaagtgggaacatcttctgggtatatacccagga
aagatattgctggatcctccggtagtactatgtccaattttctgaggaac
tgccagactgatttccagagtggttgtaccagctcgcaatcccaccaaca
atggaggagagttcctctttctccacatcctcaccagcgtctgctgtcac
ctgagtttttgatcttagccattctgactgttgtgaggtgggatctcagg
gttgttttgatttggatttccctgatgattaaggatgctgaacatttttt
tcaggtgcttctcagccatttggtattcctcagttgagaattcttttttt
ttttttttttttttttagctctgtatcccatttttaaatagggttatttg
attttctggatccagcttcatgagttctttgtatgtattggatattagtt
tcctattggatttaggattggtaaaggttctttcccaacctgttggtggc
ctttttgtcttattgacgatgtcttttgccttacagaagctttgcgattt
tatgaggtcccatttgtcaattcttttttttttttaatagaattttttta
tttattaggtattttcttcatttatgttttccagtgctatcccaaaagtc
ccccataccctcccacccttactcccctacccgcccactcccacttctag
ggccatgggggtcccctggactggggcatataaggttgcaagacaaatgg
tctcttttgtccatga
gaattctgaacagcgtatgtaccacacagtgattattctgatatattttg
atgctttaaaacccacattttttcctctaaattattacctgaaattacta
tttatgattcaaaccatctgccctaactattcatatatacaacagtggtg
ttggagccgggcatagtaggtacacacctgtaatcccaacactctggaag
cttaggacttcagggttatcctctcctacatagtgaatcccaactaaagg
ctagcctaggctgcatgagagctttcttcaaaagtcaaacaaacaaacaa
ggtttaaaactcaatgaataaatccagtaatgaaaatatcttttcacatt
gtgtggtaatggtgttttcccttaataacaatgaaagggtttggctttga
tggcctgacttactgctcaaggagaaaaaaccagcttgacagaatgacat
ttgtcttcaagtgtgtttacctgctctcatggaaaaaaataaagtgaaat
aaaacaaaattatccctgaatttagattgtaaaagtggatttttataaac
acaacataaagctgtgctaagaaacacctaaaccagattcgaaagggctc
ctatcagaactgacatttcactagggtattagtcatgaaaatgagtaatt
aagctttaaggtaagcctagatggacagtcatatggtaacctttctgctc
taaaagctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_68995028_68995761
seq2: B6Ng01-122J15.g_69_777

seq1  GAATTCTGAACAGCGTATGTACCACACAGTGATTATTCTGATATATTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAACAGCGTATGTACCACACAGTGATTATTCTGATATATTTTG  50

seq1  ATGCTTTAAAACCCACATTTTTTCCTCTAAATTATTACCTGAAATTACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTAAAACCCACATTTTTTCCTCTAAATTATTACCTGAAATTACTA  100

seq1  TTTATGATTCAAACCATCTGCCCTAACTATTCATATATACAACAGTGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGATTCAAACCATCTGCCCTAACTATTCATATATACAACAGTGGTG  150

seq1  TTGGAGCCGGGCATAGTAGGTACACACCTGTAATCCCAACACTCTGGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCCGGGCATAGTAGGTACACACCTGTAATCCCAACACTCTGGAAG  200

seq1  CTTAGGACTTCAGGGTTATCCTCTCCTACATAGTGAATCCCAACTAAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGACTTCAGGGTTATCCTCTCCTACATAGTGAATCCCAACTAAAGG  250

seq1  CTAGCCTAGGCTGCATGAGAGCTTTCTTCAAAAGTCAAACAAACAAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCTAGGCTGCATGAGAGCTTTCTTCAAAAGTCAAACAAACAAACAA  300

seq1  GGTTTAAAACTCAATGAATAAATCCAGTAATGAAAATATCTTTTCACATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAAAACTCAATGAATAAATCCAGTAATGAAAATATCTTTTCACATT  350

seq1  GTGTGGTAATGGTGTTTTCCCTTAATAACAATGAAA-GGTTTGGCTTTGA  399
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GTGTGGTAATGGTGTTTTCCCTTAATAACAATGAAAGGGTTTGGCTTTGA  400

seq1  TGGCCTGACTTACTGCTCAAGGAG-AAAAACCAGCTTGACAGAATGACA-  447
      |||||||||||||||||||||||| |||||||||||||||||||||||| 
seq2  TGGCCTGACTTACTGCTCAAGGAGAAAAAACCAGCTTGACAGAATGACAT  450

seq1  TTGTCTTCAAGTGTGTTTACCTGCTCTCATGG-AAAAAATAAAGTGAAAT  496
      |||||||||||||||||||||||||||||||| |||||||||||||||| 
seq2  TTGTCTTCAAGTGTGTTTACCTGCTCTCATGGAAAAAAATAAAGTGAAA-  499

seq1  TAAAACAAAATTATCCCTGAGTTTAGATTGTTAAAAGTGGATTTTTATAA  546
      |||||||||||||||||||| ||||||||| |||||||||||||||||||
seq2  TAAAACAAAATTATCCCTGAATTTAGATTG-TAAAAGTGGATTTTTATAA  548

seq1  ACACAACATAAAGCTGTGCTAAGAAACACCATAAACCAGACTTCGAAAGC  596
      |||||||||||||||||||||||||||||| ||||||||| |||||||| 
seq2  ACACAACATAAAGCTGTGCTAAGAAACACC-TAAACCAGA-TTCGAAAGG  596

seq1  GCTTCCTATCAAGAGCTGACATTTTCACTAGGTGTAATTAGTCAATGAGA  646
      || ||||||| ||| |||||| |||||||||| || ||||||| |||| |
seq2  GC-TCCTATC-AGAACTGACA-TTTCACTAGG-GT-ATTAGTC-ATGA-A  639

seq1  AATGAAGTAAATTAAAGCATTTAAGGTAAAGCCTAGGGATGGACGAGGTG  696
      |||| |||||  | |||| |||||||| |||||||  ||||||| ||   
seq2  AATG-AGTAA--TTAAGC-TTTAAGGT-AAGCCTA--GATGGAC-AG--T  679

seq1  CATTAGTGGTTAGACACTTTCTGCTCTCATAGAAGCTC  734
      |||   ||||   |  ||||||||||   || ||||||
seq2  CAT--ATGGT---AACCTTTCTGCTC---TAAAAGCTC  709