BAC Information

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BAC

Clone NameB6Ng01-122M13
Chromosome8 (Build37)
Map Location 35,252,280 - 35,253,340
singlet/doubletsinglet
Overlap genenone
Upstream geneEG628412, Wrn, Purg, LOC666630, Hmgb1-rs17, Tex15, Ppp2cb, Ubxd6, Gsr, Gtf2e2, Rbpms, LOC100042769, Dctn6, LOC100042777, Mboat4, Leprotl1, LOC666694, Tmem66
Downstream geneLOC619780, LOC666718, EG234159, LOC666746, Dusp4, LOC675578, Tnks, LOC666792, LOC666797, LOC666804
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122M13.bB6Ng01-122M13.g
ACCDH926120DH926121
length5201,055
definitionDH926120|Mus musculus domesticus DNA, BAC clone: B6Ng01-122M13, 5' end.DH926121|Mus musculus domesticus DNA, BAC clone: B6Ng01-122M13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
actcaagtgagctgaaactatatcgacactaaaacccacacacaaatatt
tatagcatctttattcataattggcaaaacttagaagcaaccaagatatc
cttcaacagctgaatcaacactatgacacatccatacaatacgtgaattt
taaggacttcttttcttggtgccccaaacagaatctaagtaccaggtggc
catgtgtaccaggttgataaggtcagcccctgacacagattccttttctt
ctccccatctgtgacacaatgacattcaaacataccagtgaatttccttc
acactttgtgtgtgtactcaccttagcccccaagaaaagcactcgcatat
ggcctagatctctactctgcctctaacctccctctctgactcttcttcat
cttctcccctctctccctcttccttctcggttcatctttccctatccctc
tccatcttctctccttcccctccttttgtctttcctttctctctcctctc
ctctcctctcctctccactc
gaattcaccctcccttggagattgtcaattaggtaatctctcctactcag
gtttatgattaaggtgaattagaaaattagtggcacttaaactggttatg
agagatgcctgagcttgggtgggcctgacaaggcataactacgctctgca
gcacttcatatgagccttgaaccttgtctcccccagcttcttggctgggc
agaatttcattcctgttaatgctgtcattgatagagcagctaattgttaa
ctcaaaggacaaggagggggagaagtctccaaacttatccgaactttggg
atgataatcaggcatgcctttctttcaaattctttctcaataagcacaac
aaacacaaacagaaactttggaaatttataagggaaagagaatggggtga
cccgatcaacacactcccttagggatagccacgtgacactggcattcagt
aagaccaattgataaccagtctaaggacatagctactgcttcttcttctt
cttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttct
tcttcttcttcatttatttatttatttatttattttatgtatatgagtac
actgtgagccttcatgtggttgttgggaattgaattttagaatctctgct
tgctccggttgcccctgctcgctccgctccagtcaaccctactctggccc
aaagatttctttattattataaataagtacactgtggctgttttcagaaa
caccagaaaagggcatcagatctcattatgggtggttgtgaaccaccatg
tggttgctgggatttgaactcagtgcctttgggaagagcagttaatgctt
cttacctcactgagccatctcaccagccctcaggaagtaacttctgaaca
ttcaattgtgtttcacgatctgggtctaactcctttgtgtgcgtgctttg
catgtgcatagtatatgtatgagtagccacagagctagagagttttgagt
gcttcttctaacacagtagtttcactgtgtgactcattggggtggtgggt
gtcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_35252280_35253340
seq2: B6Ng01-122M13.g_67_1121

seq1  GAATTCACCCTCCCTTGGAGATTGTCAATTAGGTAATCTCTCCTACTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCTCCCTTGGAGATTGTCAATTAGGTAATCTCTCCTACTCAG  50

seq1  GTTTATGATTAAGGTGAATTAGAAAATTAGTGGCACTTAAACTGGTTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATGATTAAGGTGAATTAGAAAATTAGTGGCACTTAAACTGGTTATG  100

seq1  AGAGATGCCTGAGCTTGGGTGGGCCTGACAAGGCATAACTACGCTCTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGCCTGAGCTTGGGTGGGCCTGACAAGGCATAACTACGCTCTGCA  150

seq1  GCACTTCATATGAGCCTTGAACCTTGTCTCCCCCAGCTTCTTGGCTGGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTCATATGAGCCTTGAACCTTGTCTCCCCCAGCTTCTTGGCTGGGC  200

seq1  AGAATTTCATTCCTGTTAATGCTGTCATTGATAGAGCAGCTAATTGTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTCATTCCTGTTAATGCTGTCATTGATAGAGCAGCTAATTGTTAA  250

seq1  CTCAAAGGACAAGGAGGGGGAGAAGTCTCCAAACTTATCCGAACTTTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGGACAAGGAGGGGGAGAAGTCTCCAAACTTATCCGAACTTTGGG  300

seq1  ATGATAATCAGGCATGCCTTTCTTTCAAATTCTTTCTCAATAAGCACAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAATCAGGCATGCCTTTCTTTCAAATTCTTTCTCAATAAGCACAAC  350

seq1  AAACACAAACAGAAACTTTGGAAATTTATAAGGGAAAGAGAATGGGGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACAAACAGAAACTTTGGAAATTTATAAGGGAAAGAGAATGGGGTGA  400

seq1  CCCGATCAACACACTCCCTTAGGGATAGCCACGTGACACTGGCATTCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGATCAACACACTCCCTTAGGGATAGCCACGTGACACTGGCATTCAGT  450

seq1  AAGACCAATTGATAACCAGTCTAAGGACATAGCTACTGCTTCTTCTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCAATTGATAACCAGTCTAAGGACATAGCTACTGCTTCTTCTTCTT  500

seq1  CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT  550

seq1  TCTTCTTCTTCATTTATTTATTTATTTATTTATTTTATGTATATGAGTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTCTTCATTTATTTATTTATTTATTTATTTTATGTATATGAGTAC  600

seq1  ACTGTGAGCCTTCATGTGGTTGTTGGGAATTGAATTTTAGAATCTCTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGAGCCTTCATGTGGTTGTTGGGAATTGAATTTTAGAATCTCTGCT  650

seq1  TGCTCCGGTTGCCCCTGCTCGCTCCGCTCCAGTCAACCCTACTCTGGCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCGGTTGCCCCTGCTCGCTCCGCTCCAGTCAACCCTACTCTGGCCC  700

seq1  AAAGATTTCTTTATTATTATAAATAAGTACACTGTGGCTGTTTTCAGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTTCTTTATTATTATAAATAAGTACACTGTGGCTGTTTTCAGAAA  750

seq1  CACCAGAAAAGGGCATCAGATCTCATTATGGGTGGTTGTGAACCACCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGAAAAGGGCATCAGATCTCATTATGGGTGGTTGTGAACCACCATG  800

seq1  TGGTTGCTGGGATTTGAACTCAGTGCCTTT-GGAAGAGCAGTTAATGC-T  848
      |||||||||||||||||||||||||||||| ||||||||||||||||| |
seq2  TGGTTGCTGGGATTTGAACTCAGTGCCTTTGGGAAGAGCAGTTAATGCTT  850

seq1  CTTACC-CACTGAGCCATCTCACCAGCCCCCAGGAAGTAACTTCTGAACA  897
      |||||| |||||||||||||||||||||| ||||||||||||||||||||
seq2  CTTACCTCACTGAGCCATCTCACCAGCCCTCAGGAAGTAACTTCTGAACA  900

seq1  TTCAATTGTGTTTCACCGATCTGGGTCTAACTCCTTTGTGTGCGTGCTTT  947
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTCAATTGTGTTTCA-CGATCTGGGTCTAACTCCTTTGTGTGCGTGCTTT  949

seq1  GCATGTGCATAGTAATATGTATGAGTAAGCACAGAAGCTAGAGGAAGGTT  997
      ||||||||||||| |||||||||||||  ||||| ||||||||    |||
seq2  GCATGTGCATAGT-ATATGTATGAGTAGCCACAG-AGCTAGAG---AGTT  994

seq1  TTGAGTGGCTTCCTCTAACACAGTAGTTTTCAACCTGTGTGACTCATTGG  1047
      |||||| ||||| ||||||||||||| |||||  ||||||||||||||||
seq2  TTGAGT-GCTTCTTCTAACACAGTAG-TTTCA--CTGTGTGACTCATTGG  1040

seq1  GGTGGT-GGTGTCAA  1061
      |||||| ||||||||
seq2  GGTGGTGGGTGTCAA  1055