BAC Information

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BAC

Clone NameB6Ng01-122P18
Chromosome8 (Build37)
Map Location 68,613,756 - 68,742,664
singlet/doubletdoublet
Overlap geneMarch1
Upstream geneLOC665388, LOC665396, LOC100040949, LOC665405, Vaultrc-ps1, LOC100040967, LOC100040986
Downstream gene1810029B16Rik, Tktl2, Npy5r, Npy1r, BC053440, LOC665453
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122P18.bB6Ng01-122P18.g
ACCDH926272DH926273
length1,1341,120
definitionDH926272|Mus musculus domesticus DNA, BAC clone: B6Ng01-122P18, 5' end.DH926273|Mus musculus domesticus DNA, BAC clone: B6Ng01-122P18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,613,756 - 68,614,905)(68,741,523 - 68,742,664)
sequence
gaattcttcagccactagagaactaggtagaaagtgccattcatgatttg
attcctttcactttgaaagcttaatatgtggacatatctaagcagattaa
gcaatcctgctgtctcactgttgaatgttctgcatactaacttgtcatac
tactgctgtgctttaaatatcactatcaaagttcatgtcgagggcagagg
agatggctcaatgagtacaagtatttggtgcacaagtataagggcctcat
ttcagattttcaaaacccatttaaatccagatacagtagaatacatctcc
tggccaagtagttgaaatatgagatggaagtggagtataggggaattgct
cttggaaatcacaggctagctagcttttcatatgcagtagtgaacaagag
actgtctcaaacaagcttgaaagaaaagaacagaaatcatgggtcgtcct
ctgatttccaaacaacataacatgcctctcccccccatacagacatacac
acacagacacacacccacagatacacccacggaaacacagacagacagac
agacagacacacacacacacacacacccgtatcctggtacacctgcgaag
ctctcaagatgtttgtggcttatatgaggaagtcaggtgcaagtcatacg
acttagctgcagtccctggcgcctttgggactgctgccacacccgctcct
cacaaccgtcaactgttttgtctccatttgtattaatctttagaagagag
aagcagtctataccctgctactttatagtgatgccctttcagatttcaga
tcccgttggggaagaaatccagtgtattatgggatcactttggaaagcac
ctgcttgctctatactgtggtcactgcttttccccccatattgtttattt
tcatttactgtgagcccagtgtctatacattctataggtagaagtgatca
ttgtgaaacatattttagaaaaatatatgcatatgtatgactcctagaat
ctctgttacctcagtaagggaacaacacaagcaagtgtgggtagtttgaa
tctgcatctgtactctgagctaactttttgtactgaagtttctgttacaa
tctcaatgtgaaattgttcattctatttaactag
gaattccattggaaatcttaattccatcaacagaagtctccacttggagg
atttggatgcacacatctttgaaggggctgttatttactttccctataca
caagtagagagtaatgtccctacctccatttctgagggactggagaggtt
tttttgtttgtttgtttttctcctttctgttaggttgatatttactgttt
tgtactatgctgacaactgtttctagcaatagcttgataaacacgattgg
agtttttctcaagcgataaagaagtagagataaagtttgccatcaatggt
atttcttctgactgttattgcagtgtgggattgagtgcacacagaattcc
atttccttgttaaaaaccagaacttacattttaaaactaatgtaggaatt
cactgtggtcttattttactgcatactcatttttaaaatgtctcttattt
agttattgtaaattagccaatattctattttataattttaccttccttct
tatttttctttaaaaagtagagactttttcatcaggtaagcatgttaaaa
attataaaacataataatttataaaattataaaaataaacaaggagctaa
attttacttttgaagattgtagcttctcaattattgttaaccaaattctc
aactccagaatctatggagaacatgtaacagtaattctgtgacgcttctg
caattacaaacacactggatgggggaaccatgaagctttactcttggagt
actgacagagtaacaacaaaattactcacattaatacagcagttacttaa
ctttataattatgtttatattatactttatatataaaaattatatatatg
tatatattatataactttatagtatacttaaaattctaaaatattatgat
ttggtagtgtcaattggatatttaaaccatacatacatcagtttcatcat
aattttagtaccttcaaatatatattaacacgtagactgtaaatagaatt
catctgacacagtacagtatcagatctagtatttgtgctgatgcctcagt
cagccatcagagtggcagaggagaaaggatgccagaactggtttaagagg
aatccaaataagctgattta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_68613756_68614905
seq2: B6Ng01-122P18.b_49_1182

seq1  GAATTCTTCAGCCACTAGAGAACTAGGTAGAAAGTGCCATTCATGATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGCCACTAGAGAACTAGGTAGAAAGTGCCATTCATGATTTG  50

seq1  ATTCCTTTCACTTTGAAAGCTTAATATGTGGACATATCTAAGCAGATTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTCACTTTGAAAGCTTAATATGTGGACATATCTAAGCAGATTAA  100

seq1  GCAATCCTGCTGTCTCACTGTTGAATGTTCTGCATACTAACTTGTCATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCCTGCTGTCTCACTGTTGAATGTTCTGCATACTAACTTGTCATAC  150

seq1  TACTGCTGTGCTTTAAATATCACTATCAAAGTTCATGTCGAGGGCAGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTGTGCTTTAAATATCACTATCAAAGTTCATGTCGAGGGCAGAGG  200

seq1  AGATGGCTCAATGAGTACAAGTATTTGGTGCACAAGTATAAGGGCCTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCTCAATGAGTACAAGTATTTGGTGCACAAGTATAAGGGCCTCAT  250

seq1  TTCAGATTTTCAAAACCCATTTAAATCCAGATACAGTAGAATACATCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATTTTCAAAACCCATTTAAATCCAGATACAGTAGAATACATCTCC  300

seq1  TGGCCAAGTAGTTGAAATATGAGATGGAAGTGGAGTATAGGGGAATTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAAGTAGTTGAAATATGAGATGGAAGTGGAGTATAGGGGAATTGCT  350

seq1  CTTGGAAATCACAGGCTAGCTAGCTTTTCATATGCAGTAGTGAACAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAAATCACAGGCTAGCTAGCTTTTCATATGCAGTAGTGAACAAGAG  400

seq1  ACTGTCTCAAACAAGCTTGAAAGAAAAGAACAGAAATCATGGGTCGTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTCAAACAAGCTTGAAAGAAAAGAACAGAAATCATGGGTCGTCCT  450

seq1  CTGATTTCCAAACAACATAACATGCCTCTCCCCCCCATACAGACATACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTCCAAACAACATAACATGCCTCTCCCCCCCATACAGACATACAC  500

seq1  ACACAGACACACACCCACAGATACACCCACGGAAACACAGACAGACAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGACACACACCCACAGATACACCCACGGAAACACAGACAGACAGAC  550

seq1  AGACAGACACACACACACACACACACCCGTATCCTGGTACACCTGCGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGACACACACACACACACACACCCGTATCCTGGTACACCTGCGAAG  600

seq1  CTCTCAAGATGTTTGTGGCTTATATGAGGAAGTCAGGTGCAAGTCATACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAAGATGTTTGTGGCTTATATGAGGAAGTCAGGTGCAAGTCATACG  650

seq1  ACTTAGCTGCAGTCCCTGGCGCCTTTGGGACTGCTGCCACACCCGCTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGCTGCAGTCCCTGGCGCCTTTGGGACTGCTGCCACACCCGCTCCT  700

seq1  CACAACCGTCAACTGTTTTGTCTCCATTTGTATTAATCTTTAGAAGAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACCGTCAACTGTTTTGTCTCCATTTGTATTAATCTTTAGAAGAGAG  750

seq1  AAGCAGTCTATACCCTGCTACTTTATAGTGATGCCCTTTCAGATTTCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTCTATACCCTGCTACTTTATAGTGATGCCCTTTCAGATTTCAGA  800

seq1  TCCCGTTGGGGAAGAAATCCAGTGTATTATGGGATCACTTTGGAAAGCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGTTGGGGAAGAAATCCAGTGTATTATGGGATCACTTTGGAAAGCAC  850

seq1  CTGCTTGCTCTATACTGTGGTCACTGCTTTTCCCCCCATATTGTTTATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTGCTCTATACTGTGGTCACTGCTTTTCCCCCCATATTGTTTATTT  900

seq1  TCATTTACTGTGAGCCCAGTGTCTATACATTCTATAGGTAGAAGTGATCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTACTGTGAGCCCAGTGTCTATACATTCTATAGGTAGAAGTGATCA  950

seq1  TTTGTGAAACATATTTTAGAAAAATAATAATGCATATGTATGACTCCTAG  1000
       |||||||||||||||||||||||||   |||||||||||||||||||||
seq2  -TTGTGAAACATATTTTAGAAAAATA--TATGCATATGTATGACTCCTAG  997

seq1  AAATCTCTGTTTAACCTCAGTAAAGGAAACAACACAAAGCAAAGTGTGGG  1050
       ||||||||||  |||||||| |||| |||||||| |||| |||||||||
seq2  -AATCTCTGTT--ACCTCAGT-AAGGGAACAACAC-AAGC-AAGTGTGGG  1041

seq1  TAGTTTGAAATCTGCATTCTGTACTCTGAAGCTAACACCTTTTGTACTGA  1100
      ||||||| |||||||| ||||||||||| |||||  || |||||||||||
seq2  TAGTTTG-AATCTGCA-TCTGTACTCTG-AGCTA--ACTTTTTGTACTGA  1086

seq1  GGTTTCCTGTTACAAAATCTC-ATGTGAAAATTGTTCATTCTA-TTAACT  1148
       |||| |||||||  |||||| ||||| ||||||||||||||| ||||||
seq2  AGTTT-CTGTTAC--AATCTCAATGTG-AAATTGTTCATTCTATTTAACT  1132

seq1  AG  1150
      ||
seq2  AG  1134

seq1: chr8_68741523_68742664
seq2: B6Ng01-122P18.g_68_1187 (reverse)

seq1  TAAACTCAGCTTATCTGGA-TCCTCTTATAACCATGTTTCTTGCATCCTT  49
      |||| ||||||||| |||| |||||||| |||||   |||| ||||||||
seq2  TAAA-TCAGCTTATTTGGATTCCTCTTA-AACCA--GTTCTGGCATCCTT  46

seq1  CTTCCTCTGCCCACTTCCTGATTGGCTGACTTTGAGCATCAAGCACAAAA  99
        ||||||| |||||  |||| |||||||||  | ||||| |||||||| 
seq2  TCTCCTCTG-CCACT--CTGA-TGGCTGACTGAG-GCATC-AGCACAAA-  89

seq1  TTACTAGAATCTGATTACCTGTAACTGTGTCAGATGAAATCTATTTAACA  149
       |||||| |||||||   |||| ||||||||||||||| ||||||| |||
seq2  -TACTAG-ATCTGAT--ACTGT-ACTGTGTCAGATGAATTCTATTT-ACA  133

seq1  GGTCTTACGTGTTAATATATATTTGAAGGTACTAAAATTATGATTGAAAC  199
       ||| |||||||||||||||||||||||||||||||||||||| ||||||
seq2  -GTC-TACGTGTTAATATATATTTGAAGGTACTAAAATTATGA-TGAAAC  180

seq1  TTGATGTATGTATGGTTTAAATATCCAATTGACACTACCAAAATCATATA  249
       |||||||||||||||||||||||||||||||||||||| ||||||||  
seq2  -TGATGTATGTATGGTTTAAATATCCAATTGACACTACC-AAATCATAAT  228

seq1  TTTTTAGAATTTTAAGTATAACTATAAAGTTATATAATATATACATATAT  299
       |||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATTTTAGAATTTTAAGTAT-ACTATAAAGTTATATAATATATACATATAT  277

seq1  ATAATTTTTATATATAAAGTATAATATAAACATAATTATAAAGTTAAGTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTTATATATAAAGTATAATATAAACATAATTATAAAGTTAAGTA  327

seq1  ACTGCTGTATTAATGTGAGTAATTTTGTTGTTACTCTGTCAGTACTCCAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTGTATTAATGTGAGTAATTTTGTTGTTACTCTGTCAGTACTCCAA  377

seq1  GAGTAAAGCTTCATGGTTCCCCCATCCAGTGTGTTTGTAATTGCAGAAGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAAGCTTCATGGTTCCCCCATCCAGTGTGTTTGTAATTGCAGAAGC  427

seq1  GTCACAGAATTACTGTTACATGTTCTCCATAGATTCTGGAGTTGAGAATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGAATTACTGTTACATGTTCTCCATAGATTCTGGAGTTGAGAATT  477

seq1  TGGTTAACAATAATTGAGAAGCTACAATCTTCAAAAGTAAAATTTAGCTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAACAATAATTGAGAAGCTACAATCTTCAAAAGTAAAATTTAGCTC  527

seq1  CTTGTTTATTTTTATAATTTTATAAATTATTATGTTTTATAATTTTTAAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTATTTTTATAATTTTATAAATTATTATGTTTTATAATTTTTAAC  577

seq1  ATGCTTACCTGATGAAAAAGTCTCTACTTTTTAAAGAAAAATAAGAAGGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTACCTGATGAAAAAGTCTCTACTTTTTAAAGAAAAATAAGAAGGA  627

seq1  AGGTAAAATTATAAAATAGAATATTGGCTAATTTACAATAACTAAATAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAAATTATAAAATAGAATATTGGCTAATTTACAATAACTAAATAAG  677

seq1  AGACATTTTAAAAATGAGTATGCAGTAAAATAAGACCACAGTGAATTCCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTTTAAAAATGAGTATGCAGTAAAATAAGACCACAGTGAATTCCT  727

seq1  ACATTAGTTTTAAAATGTAAGTTCTGGTTTTTAACAAGGAAATGGAATTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAGTTTTAAAATGTAAGTTCTGGTTTTTAACAAGGAAATGGAATTC  777

seq1  TGTGTGCACTCAATCCCACACTGCAATAACAGTCAGAAGAAATACCATTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCACTCAATCCCACACTGCAATAACAGTCAGAAGAAATACCATTG  827

seq1  ATGGCAAACTTTATCTCTACTTCTTTATCGCTTGAGAAAAACTCCAATCG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAAACTTTATCTCTACTTCTTTATCGCTTGAGAAAAACTCCAATCG  877

seq1  TGTTTATCAAGCTATTGCTAGAAACAGTTGTCAGCATAGTACAAAACAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATCAAGCTATTGCTAGAAACAGTTGTCAGCATAGTACAAAACAGT  927

seq1  AAATATCAACCTAACAGAAAGGAGAAAAACAAACAAACAAAAAAACCTCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCAACCTAACAGAAAGGAGAAAAACAAACAAACAAAAAAACCTCT  977

seq1  CCAGTCCCTCAGAAATGGAGGTAGGGACATTACTCTCTACTTGTGTATAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCCCTCAGAAATGGAGGTAGGGACATTACTCTCTACTTGTGTATAG  1027

seq1  GGAAAGTAAATAACAGCCCCTTCAAAGATGTGTGCATCCAAATCCTCCAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGTAAATAACAGCCCCTTCAAAGATGTGTGCATCCAAATCCTCCAA  1077

seq1  GTGGAGACTTCTGTTGATGGAATTAAGATTTCCAATGGAATTC  1142
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGACTTCTGTTGATGGAATTAAGATTTCCAATGGAATTC  1120