BAC Information

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BAC

Clone NameB6Ng01-123B13
Chromosome8 (Build37)
Map Location 15,725,456 - 15,726,584
singlet/doubletsinglet
Overlap genenone
Upstream geneDlgap2, C030037F17Rik, Cln8, Arhgef10, 2900016B01Rik, 5830468F06Rik, Kbtbd11, BB014433, Myom2, EG665599, EG234097, EG665619
Downstream geneLOC634008, Csmd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123B13.bB6Ng01-123B13.g
ACCDH926357DH926358
length1,1231,163
definitionDH926357|Mus musculus domesticus DNA, BAC clone: B6Ng01-123B13, 5' end.DH926358|Mus musculus domesticus DNA, BAC clone: B6Ng01-123B13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcagcctacttcctgcacctcagtgtaatggagacgagtctgt
ggcaaactgagccacaaaagccaggcttttgtttcttgacagtataaaag
atcttctttctttatattttttaaaagaaaaatatatagaggggtttatt
ccaatattaattggataagatgaaccaccctttgcccaacaagccagtta
ttccctctctttctctaatgtccatgaaaggcacatgcacggacagaaga
caacctcgtgtccttcctcagcagttatttactttggcttttgagtcagg
gtctcacttgatccttaagtgttcctgatttggccagcgagctctagttt
ccacttgtctttatcatcccagctctgggatcacaaagataatccacagt
gtctgttttatttattgttcttatttggctgggttttattgtttgttttc
ttttgttttattggattctaggtatcaaatttagatcatcatacttggat
ggcaaacagtctaataactggaacatttactctctccccgctttcttttt
ccccctattatttaagaggtttagtaattacttttatgtgcacacatgtg
aatgtgccccatgaggtcagaagaaggaatgctattccctgttactggag
ttaaaggctatcgtggaccaccacatgagagctggaaatggaacttgtgt
cctttgcaagaacaagagctttagcagtggagccatctctccagccccgt
tgcactatttttgcccgacgttttcccttcagttaagtctggtgacttta
ccagcatgtacagaatactgtagtgatacgctagccagcattctaccacg
aatagagagaagttcccattgtccgtgaagttgaggcttttgtatggggt
gagctaagttatggctgttgtatttaaagacttgcatgaggaaggagcaa
ggcagccctccttagtcagctgaggaagtatcttggaatggcgacttgta
tggcatcggctcatatgagtcatatgcagggaagttgcttcagcccataa
gacgtccctggcctgctattgtgtaccttatatggtgacacttcttagta
gagcctagactaataaaagggac
gaattctttaatatacaactttatgtacatacatttagtacaatgacatc
taattgaggggccgatggagtgatgaatcagagaaagatttgacagaatg
agtcggagataggatacacccagctctcaggagaaaagctatctaagaac
agtacagggagagaggtcgatcaggtctatttagtcagctgagttcagtg
cagtggagtcagagttaggagtcagtgcagtgagtgcagtgcactggagt
tgagttccttcctgagtttattcagttcagggcaggtcagcagaggcagt
tgaagccagagaataagaaggagccataagattagaacaaattcccagag
ttagtttgaggccaggcagagcaattcagtgagaagcttcaagaaggccc
attgattagttttctttgagaggagttggagcgaaaacagctgaggtgaa
ccagccagccacagttcagaaagaactagaaagagtgagcttattcagct
gtaagtctcaagatgatgattacatcaggcaaataaaaggtacttttata
gctggtcaacattccatgttaggatatcaggatgggtgctcatggtacag
ggaaacatattgctaccaggataactacacacactttcttatgagggtcc
taccctgtgtgatatgttttgtctttcagtcattagctttatagacttta
aaataataattaaatatgtagaaaaatacacagaccctgcgttgaatgtg
agaacttatccaaattttcatcaaaattttaaaatagggaaaatgcaaat
gacaatgaactctatgtgaccattggcatgcaagctctctaaaactcaac
caaagaaaaggctttggccaataaagaaggcatgtatattttaggtaagg
catatattttgggaaatacaatttgttatttattttttataatcaactta
tttattcactttggatcctggtacagtcctccctgctctttatcatcatg
tctccacccttacaaatcctcctccaatgaaccccctctccttctctgag
aaaatatacaccaagttcctggatatccaggtcacaacagaaactaaatt
gcttctgaagcccaccagcattctatgttagggaagggatacacattgcg
cggccgaacctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_15725456_15726584
seq2: B6Ng01-123B13.b_50_1172

seq1  GAATTCTTCAGCCTACTTCCTGCACCTCAGTGTAATGGAGACGAGTCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGCCTACTTCCTGCACCTCAGTGTAATGGAGACGAGTCTGT  50

seq1  GGCAAACTGAGCCACAAAAGCCAGGCTTTTGTTTCTTGACAGTATAAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAACTGAGCCACAAAAGCCAGGCTTTTGTTTCTTGACAGTATAAAAG  100

seq1  ATCTTCTTTCTTTATATTTTTTAAAAGAAAAATATATAGAGGGGTTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTTTCTTTATATTTTTTAAAAGAAAAATATATAGAGGGGTTTATT  150

seq1  CCAATATTAATTGGATAAGATGAACCACCCTTTGCCCAACAAGCCAGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATATTAATTGGATAAGATGAACCACCCTTTGCCCAACAAGCCAGTTA  200

seq1  TTCCCTCTCTTTCTCTAATGTCCATGAAAGGCACATGCACGGACAGAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCTCTTTCTCTAATGTCCATGAAAGGCACATGCACGGACAGAAGA  250

seq1  CAACCTCGTGTCCTTCCTCAGCAGTTATTTACTTTGGCTTTTGAGTCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTCGTGTCCTTCCTCAGCAGTTATTTACTTTGGCTTTTGAGTCAGG  300

seq1  GTCTCACTTGATCCTTAAGTGTTCCTGATTTGGCCAGCGAGCTCTAGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCACTTGATCCTTAAGTGTTCCTGATTTGGCCAGCGAGCTCTAGTTT  350

seq1  CCACTTGTCTTTATCATCCCAGCTCTGGGATCACAAAGATAATCCACAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTGTCTTTATCATCCCAGCTCTGGGATCACAAAGATAATCCACAGT  400

seq1  GTCTGTTTTATTTATTGTTCTTATTTGGCTGGGTTTTATTGTTTGTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTTTTATTTATTGTTCTTATTTGGCTGGGTTTTATTGTTTGTTTTC  450

seq1  TTTTGTTTTATTGGATTCTAGGTATCAAATTTAGATCATCATACTTGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTATTGGATTCTAGGTATCAAATTTAGATCATCATACTTGGAT  500

seq1  GGCAAACAGTCTAATAACTGGAACATTTACTCTCTCCCCGCTTTCTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAACAGTCTAATAACTGGAACATTTACTCTCTCCCCGCTTTCTTTTT  550

seq1  CCCCCTATTATTTAAGAGGTTTAGTAATTACTTTTATGTGCACACATGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTATTATTTAAGAGGTTTAGTAATTACTTTTATGTGCACACATGTG  600

seq1  AATGTGCCCCATGAGGTCAGAAGAAGGAATGCTATTCCCTGTTACTGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGCCCCATGAGGTCAGAAGAAGGAATGCTATTCCCTGTTACTGGAG  650

seq1  TTAAAGGCTATCGTGGACCACCACATGAGAGCTGGAAATGGAACTTGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGCTATCGTGGACCACCACATGAGAGCTGGAAATGGAACTTGTGT  700

seq1  CCTTTGCAAGAACAAGAGCTTTAGCAGTGGAGCCATCTCTCCAGCCCCGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGCAAGAACAAGAGCTTTAGCAGTGGAGCCATCTCTCCAGCCCCGT  750

seq1  TGCACTATTTTTGCCCGACGTTTTCCCTTCAGTTAAGTCTGGTGACTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTATTTTTGCCCGACGTTTTCCCTTCAGTTAAGTCTGGTGACTTTA  800

seq1  CCAGCATGTACAGAATACTGTAGTGATACGCTAGCCAGCATTCTACCACG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCATGTACAGAATACTGTAGTGATACGCTAGCCAGCATTCTACCACG  850

seq1  AATAGAGAGAAGTTCCCATTGTCCGTGAAGTTGAGGCTTTTGTATGGGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGAGAAGTTCCCATTGTCCGTGAAGTTGAGGCTTTTGTATGGGGT  900

seq1  GAGCTAAGGTTATGGCTGTTGTATTTAAAGACTTGCATGAGGAAGGAGCA  950
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAA-GTTATGGCTGTTGTATTTAAAGACTTGCATGAGGAAGGAGCA  949

seq1  AGGCAGCCCTCCTTAGTCAGCTGAGGAAGGTATCTTGGAATGGCGACTTG  1000
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AGGCAGCCCTCCTTAGTCAGCTGAGGAA-GTATCTTGGAATGGCGACTTG  998

seq1  TATGGCATCGGCTCATATGAGTCATATGCAGGGGAGGTTGCTTCAGCCCC  1050
      |||||||||||||||||||||||||||||| |||| |||||||||| |||
seq2  TATGGCATCGGCTCATATGAGTCATATGCA-GGGAAGTTGCTTCAG-CCC  1046

seq1  ATAAAGACGTCCCTGGGCTGCTATTGTGTAACCTTA-ATGGTGAACAC-T  1098
      || ||||||||||||| |||||||||||| |||||| |||||| |||| |
seq2  AT-AAGACGTCCCTGGCCTGCTATTGTGT-ACCTTATATGGTG-ACACTT  1093

seq1  CTTAGTAAGAGGCTAGACTAATAAAAGGGAC  1129
      |||||| |||| |||||||||||||||||||
seq2  CTTAGT-AGAGCCTAGACTAATAAAAGGGAC  1123