BAC Information

Click to search

BAC

Clone NameB6Ng01-123C15
Chromosome8 (Build37)
Map Location 79,133,789 - 79,271,962
singlet/doubletdoublet
Overlap genenone
Upstream gene1700007B14Rik, LOC666036, LOC100039185, EG631594, LOC666226
Downstream geneLOC100039211, LOC384847, Nr3c2, Arhgap10, LOC100039235, AI931714, Tmem34, Ednra
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123C15.bB6Ng01-123C15.g
ACCDH926408DH926409
length1,117933
definitionDH926408|Mus musculus domesticus DNA, BAC clone: B6Ng01-123C15, 5' end.DH926409|Mus musculus domesticus DNA, BAC clone: B6Ng01-123C15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,270,824 - 79,271,962)(79,133,789 - 79,134,574)
sequence
gaattccatagacatatcaactgcttttcttcagatatagtaaatactaa
tgataatgtgcctttttgttatggcctcatttctctaatcattaaaactt
tatatttttacctatattgtatatcaacttaagtaaggtgtcttgactta
ttctgaatctgtgctctcatgtccacgttctctcgcactatctattgcca
aaagctttaaaaattactttcgtgatgcttccaagtttagctttgttgac
ttactttcctttttagatcctgttgtctaaattttgaattgtttactcat
cttaattattatatttttgaatacctttatttcttttgatttaaaaatac
tttcatctctccattatttaccttttaagacaatatttgttaacttactc
tatactctttctttgtttatctctgtctctagaaatatataatttctttt
taaatttcaagttagaatcaattttgttaatgtcttgtaaatgcaattta
tactttcttcattacaaaaaatacccagtatatttgcaacttgtttagga
ctgcaatttatttagaaattaattagcttcatcagcttgagaaagtctga
catttgcaagatactgtctttacatccaagaatttgctactaattaaaag
ctattcaaatctcaatttttaaattttgtgtgtaaataaacaaatataga
actacttgtttctttttacacaaacacattttttatgtagttggtcaaaa
tagaaaatgtactttccattctccaagaagttttgcagaatatattctat
gagtaaaataataataaatagaatacagtagtaaaaaaattgtgacaatt
tgaagactcttttgcaaattaaagctgaacattgagtacatacagatcca
ggcacccaggctgttgttgggtagttgtcttcaaagactcgtttactgaa
gtttacactacactaagtataggtagttggactctaggaggggtacagta
aagagtatgtcactgaggtgtcctgaaaggttaatgggacgctgcagctt
gttctttttgctggcttccagatgcataaaaagaacaatatcctatacac
ttgatgcttaccatcct
gaattcactatttgcttactaaattaattatgataatgaccacatgtaaa
tagtaaaaacctcaaacagtggtgctttaaatacacttgacgtttacttg
tttttaggaagaacttgaaagacaaacaattcaagagagtgttttgtatc
aacattcttagggaacctaggtcttcaccagctctctgccctagtgtccc
ctgggtgtggttgtcacttaggcagaaggaagggttgagaaggatcaatg
gctccgtgcaaactgaaggatcctgaaatgtcacaggacatttgtaggat
gtcccatgtctgctccacaagagggcttgggctgcttggagaggcaggag
gtaggaggcagaaggcaggaagtggagtatgactgagattaccccaaact
ggctcccagagggtgtcaggctatattggaagctgctccggggatggggg
agcacagtctgaggtcccagggactgccagagctggctccaggtcccagg
cctgcaaggaggccagtgtcccagggtcatctgttctcaggctctagggc
acccaggcaccactgaatccgtggggagagagttcttggtttgtcagcag
gcagctggcttggcttggtggtcatggctgggagtacagagaggccttct
aaggggagattagatggctggctctttaggcaaatgcctgctccctttgc
tccccatgatggatcccaatgaaaagaggcagtccatggttttaaggcac
ttactgtcatggcagaaagtagatgaataaaactgtacccaggttctcag
gtctggctggaggttaatatctttttgcagggaggagcacctggaaaggg
gagcttaattggctaagcttcaggcattagataccgcataaactggagat
ctgttttgagactacttgaccacagtcatgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_79270824_79271962
seq2: B6Ng01-123C15.b_44_1160 (reverse)

seq1  AGGATGGTAAGCATCATGTGTATAAAGGGAATATTGTTCTTTTTATTGCA  50
      |||||||||||||||| |||||||    | ||||||||||||||| ||||
seq2  AGGATGGTAAGCATCAAGTGTATA----GGATATTGTTCTTTTTA-TGCA  45

seq1  TCTGGGAAGCAGCAAAAAGAAACAAGCTGCCAGCGTCCCATTAAACTCTT  100
      ||||| |  |||||||||| ||||||||| ||||||||||||||   |||
seq2  TCTGGAAGCCAGCAAAAAG-AACAAGCTG-CAGCGTCCCATTAA--CCTT  91

seq1  TCAGGGAACACCCTCAGTGACATAACTTCCTTTAACTGTACCCACCTCCT  150
      |||||  ||| |||||||||||| |||  |||| ||||||||  ||||||
seq2  TCAGG--ACA-CCTCAGTGACAT-ACT--CTTT-ACTGTACC--CCTCCT  132

seq1  AGAGGTCCAACTACCTATACTTAGTGTAGTGTAAAACCTTCAGTAAACGA  200
      ||| |||||||||||||||||||||||||||||||  |||||||||||||
seq2  AGA-GTCCAACTACCTATACTTAGTGTAGTGTAAA--CTTCAGTAAACGA  179

seq1  GTCTTTGAAGAACAACTACCCAACAACAGCCTGGGTGCCTGGATCTGTAT  250
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTGAAG-ACAACTACCCAACAACAGCCTGGGTGCCTGGATCTGTAT  228

seq1  GTACTCAATGTTCAGCTTTAATTTGCAAAAGAGTCTTCAAATTGTCACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCAATGTTCAGCTTTAATTTGCAAAAGAGTCTTCAAATTGTCACAA  278

seq1  TTTTTTTACTACTGTATTCTATTTATTATTATTTTACTCATAGAATATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTACTACTGTATTCTATTTATTATTATTTTACTCATAGAATATAT  328

seq1  TCTGCAAAACTTCTTGGAGAATGGAAAGTACATTTTCTATTTTGACCAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAAAACTTCTTGGAGAATGGAAAGTACATTTTCTATTTTGACCAAC  378

seq1  TACATAAAAAATGTGTTTGTGTAAAAAGAAACAAGTAGTTCTATATTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAAAAATGTGTTTGTGTAAAAAGAAACAAGTAGTTCTATATTTGT  428

seq1  TTATTTACACACAAAATTTAAAAATTGAGATTTGAATAGCTTTTAATTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTACACACAAAATTTAAAAATTGAGATTTGAATAGCTTTTAATTAG  478

seq1  TAGCAAATTCTTGGATGTAAAGACAGTATCTTGCAAATGTCAGACTTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAATTCTTGGATGTAAAGACAGTATCTTGCAAATGTCAGACTTTCT  528

seq1  CAAGCTGATGAAGCTAATTAATTTCTAAATAAATTGCAGTCCTAAACAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTGATGAAGCTAATTAATTTCTAAATAAATTGCAGTCCTAAACAAG  578

seq1  TTGCAAATATACTGGGTATTTTTTGTAATGAAGAAAGTATAAATTGCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAATATACTGGGTATTTTTTGTAATGAAGAAAGTATAAATTGCATT  628

seq1  TACAAGACATTAACAAAATTGATTCTAACTTGAAATTTAAAAAGAAATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGACATTAACAAAATTGATTCTAACTTGAAATTTAAAAAGAAATTA  678

seq1  TATATTTCTAGAGACAGAGATAAACAAAGAAAGAGTATAGAGTAAGTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTCTAGAGACAGAGATAAACAAAGAAAGAGTATAGAGTAAGTTAA  728

seq1  CAAATATTGTCTTAAAAGGTAAATAATGGAGAGATGAAAGTATTTTTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATTGTCTTAAAAGGTAAATAATGGAGAGATGAAAGTATTTTTAAA  778

seq1  TCAAAAGAAATAAAGGTATTCAAAAATATAATAATTAAGATGAGTAAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGAAATAAAGGTATTCAAAAATATAATAATTAAGATGAGTAAACA  828

seq1  ATTCAAAATTTAGACAACAGGATCTAAAAAGGAAAGTAAGTCAACAAAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAAATTTAGACAACAGGATCTAAAAAGGAAAGTAAGTCAACAAAGC  878

seq1  TAAACTTGGAAGCATCACGAAAGTAATTTTTAAAGCTTTTGGCAATAGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTGGAAGCATCACGAAAGTAATTTTTAAAGCTTTTGGCAATAGAT  928

seq1  AGTGCGAGAGAACGTGGACATGAGAGCACAGATTCAGAATAAGTCAAGAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCGAGAGAACGTGGACATGAGAGCACAGATTCAGAATAAGTCAAGAC  978

seq1  ACCTTACTTAAGTTGATATACAATATAGGTAAAAATATAAAGTTTTAATG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTACTTAAGTTGATATACAATATAGGTAAAAATATAAAGTTTTAATG  1028

seq1  ATTAGAGAAATGAGGCCATAACAAAAAGGCACATTATCATTAGTATTTAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAGAAATGAGGCCATAACAAAAAGGCACATTATCATTAGTATTTAC  1078

seq1  TATATCTGAAGAAAAGCAGTTGATATGTCTATGGAATTC  1139
      |||||||||||||||||||||||||||||||||||||||
seq2  TATATCTGAAGAAAAGCAGTTGATATGTCTATGGAATTC  1117

seq1: chr8_79133789_79134574
seq2: B6Ng01-123C15.g_69_856

seq1  GAATTCACTATTTGCTTACTAAATTAATTATGATAATGACCACATGTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATTTGCTTACTAAATTAATTATGATAATGACCACATGTAAA  50

seq1  TAGTAAAAACCTCAAACAGTGGTGCTTTAAATACACTTGACGTTTACTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAAAACCTCAAACAGTGGTGCTTTAAATACACTTGACGTTTACTTG  100

seq1  TTTTTAGGAAGAACTTGAAAGACAAACAATTCAAGAGAGTGTTTTGTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGGAAGAACTTGAAAGACAAACAATTCAAGAGAGTGTTTTGTATC  150

seq1  AACATTCTTAGGGAACCTAGGTCTTCACCAGCTCTCTGCCCTAGTGTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCTTAGGGAACCTAGGTCTTCACCAGCTCTCTGCCCTAGTGTCCC  200

seq1  CTGGGTGTGGTTGTCACTTAGGCAGAAGGAAGGGTTGAGAAGGATCAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTGTGGTTGTCACTTAGGCAGAAGGAAGGGTTGAGAAGGATCAATG  250

seq1  GCTCCGTGCAAACTGAAGGATCCTGAAATGTCACAGGACATTTGTAGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCGTGCAAACTGAAGGATCCTGAAATGTCACAGGACATTTGTAGGAT  300

seq1  GTCCCATGTCTGCTCCACAAGAGGGCTTGGGCTGCTTGGAGAGGCAGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCATGTCTGCTCCACAAGAGGGCTTGGGCTGCTTGGAGAGGCAGGAG  350

seq1  GTAGGAGGCAGAAGGCAGGAAGTGGAGTATGACTGAGATTACCCCAAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAGGCAGAAGGCAGGAAGTGGAGTATGACTGAGATTACCCCAAACT  400

seq1  GGCTCCCAGAGGGTGTCAGGCTATATTGGAAGCTGCTCCGGGGATGGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCCAGAGGGTGTCAGGCTATATTGGAAGCTGCTCCGGGGATGGGGG  450

seq1  AGCACAGTCTGAGGTCCCAGGGACTGCCAGAGCTGGCTCCAGGTCCCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGTCTGAGGTCCCAGGGACTGCCAGAGCTGGCTCCAGGTCCCAGG  500

seq1  CCTGCAAGGAGGCCAGTGTCCCAGGGTCATCTGTTCTCAGGCTCTAGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAAGGAGGCCAGTGTCCCAGGGTCATCTGTTCTCAGGCTCTAGGGC  550

seq1  ACCCAGGCACCACTGAATCCGTGGGGAGAGAGTTCTTGGTTTGTCAGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGCACCACTGAATCCGTGGGGAGAGAGTTCTTGGTTTGTCAGCAG  600

seq1  GCAGCTGGCTTGGCTTGGTGGTCATGGCTGGGAGTACAGAGAGGCCTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTGGCTTGGCTTGGTGGTCATGGCTGGGAGTACAGAGAGGCCTTCT  650

seq1  AA-GGGAGATTAGATGGCTGGCTCTTTAGGCAAATGCCTGCT-CCATTGC  698
      || ||||||||||||||||||||||||||||||||||||||| || ||||
seq2  AAGGGGAGATTAGATGGCTGGCTCTTTAGGCAAATGCCTGCTCCCTTTGC  700

seq1  TCCCCATGATGGATCCCAATGAAAAGAGGCAGTCCATGGTTTTAAGGCAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCATGATGGATCCCAATGAAAAGAGGCAGTCCATGGTTTTAAGGCAC  750

seq1  TTACTGTCATGGCAGAAAGTAGATGAATAAAACTGTAC  786
      ||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTCATGGCAGAAAGTAGATGAATAAAACTGTAC  788