BAC Information

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BAC

Clone NameB6Ng01-123F03
Chromosome8 (Build37)
Map Location 90,403,685 - 90,499,039
singlet/doubletdoublet
Overlap geneZfp423
Upstream geneBC004022, LOC666960, EG625298, EG330819, Cbln1, LOC100040294, 4933402J07Rik
Downstream geneLOC100040328, 5033428A16Rik, Heatr3, Papd5, Adcy7, Brd7, LOC100040369, Nkd1, 9130017C17Rik, Nod2, Cyld, LOC675985
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123F03.bB6Ng01-123F03.g
ACCDH926517DH926518
length1,040254
definitionDH926517|Mus musculus domesticus DNA, BAC clone: B6Ng01-123F03, 5' end.DH926518|Mus musculus domesticus DNA, BAC clone: B6Ng01-123F03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,497,991 - 90,499,039)(90,403,685 - 90,403,938)
sequence
gaattccaggaccctgaggagtcactgtccagacttggcggcaggggatg
tcgatcgagccttgtgcactgaccacgtcctgtgctttcagaggagcccc
tggggacaggactccgggctcctcgcctgtgaacttcacttgcaggtcat
tcaacaaagatcccgtgcttgcccccagattcctggctgtgcgccccgtg
ttcttcccggttctcccccaccttgccagctgggcagcttagtaatgggg
gaagggctccctcccttctgaacccctgcggcggcttccttccccctccc
tgtggctctggaattcttggtggagcccactcctccggccctgtggagcg
aaccccctcccgtgcgctgggtgcggctgggtgtgcgggacatggagcac
ggagatcgcgggtcgagtggggcttgggccctgcacgctggtgtttctgc
atccaaccgtgtttatacaccggggcataattttttgtgcacacacgcag
cgacgcttggggaactttcctgaaaatcctgggctggcagtttaaatata
aaaaggctttgtttaatgccagaacgttttccccctgttctgggagtcgc
gaagcattcacctgcttcctcactcctttaaagactcgggaggccagact
tgttttaggggtgaagagttagggaggagacccctggatccaagcacaag
gttatcttccaagtccatgccacagccttctccatctctgtcgttcaagg
ctatggaagcccctaaacctcgccagtcctgcctctctcctggggctgtt
aactttggatctttcctctgcaaatatctgggagtgttaaaccgatgcca
acagcattgtggctgtggaattcaagttgaaatgtggccaaaacttggaa
gctgaggaacagagggctggaggaagctgatgggagggtgtgttggcagg
caagtgaccatggagggcagaccctctctcggacttgaccacttttaaga
gagacgggtccagtaccatatgcctttaaccccattactt
caagcaaaatggctttgcaccctacttgggggtgggagggatgagggttg
gggcctgggtacttcctgcaaacactgggaagcctgcaggagtccagttt
ctttttgttaactaatttctatctgggccttcagctactagttcctaaaa
cagtctgcactgcagccctccagtgtttcttccgtggagacaacttgtta
ccctcccctctcccggtagaagaagggaggtgtgaaataccctctaaaag
aggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_90497991_90499039
seq2: B6Ng01-123F03.b_49_1088 (reverse)

seq1  AAGTAATGGGATTAAAGGCATATGTTACTGTGACCCGTACTCTCTTTAAA  50
      |||||||||| ||||||||||||| ||||| ||||||| ||||||| |||
seq2  AAGTAATGGGGTTAAAGGCATATGGTACTG-GACCCGT-CTCTCTTAAAA  48

seq1  GTGGTCAAGTCCGAGAGAGGGTCTGCCCTCCATGGTCACCTTGCCTTGCC  100
      |||||||||||||||||||||||||||||||||||||| |||||| ||||
seq2  GTGGTCAAGTCCGAGAGAGGGTCTGCCCTCCATGGTCA-CTTGCC-TGCC  96

seq1  CACAACACCCTCCCCTTCAGCTTCCTCCAGCCCTCTGTTCCTCAGCCTTC  150
       || ||||||| ||| ||||||||||||||||||||||||||||| ||||
seq2  AAC-ACACCCT-CCCATCAGCTTCCTCCAGCCCTCTGTTCCTCAG-CTTC  143

seq1  CACGTTTTTGGCCACATTTCAACTTGAATTCCACAGCCACAATGCTGTTG  200
      || | |||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAG-TTTTGGCCACATTTCAACTTGAATTCCACAGCCACAATGCTGTTG  192

seq1  GCATCGGTTTAACACTCCCAGATATTTGCAGAGGAAAGATCCAAAGTTAA  250
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCATCGGTTTAACACTCCCAGATATTTGCAGAGGAAAGATCCAAAGTT-A  241

seq1  ACAGCCCCAGGAGAGAGGCAGGACTGGCGAGGTTTAGGGGCTTCCATAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCCCAGGAGAGAGGCAGGACTGGCGAGGTTTAGGGGCTTCCATAGC  291

seq1  CTTGAACGACAGAGATGGAGAAGGCTGTGGCATGGACTTGGAAGATAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACGACAGAGATGGAGAAGGCTGTGGCATGGACTTGGAAGATAACC  341

seq1  TTGTGCTTGGATCCAGGGGTCTCCTCCCTAACTCTTCACCCCTAAAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTTGGATCCAGGGGTCTCCTCCCTAACTCTTCACCCCTAAAACAA  391

seq1  GTCTGGCCTCCCGAGTCTTTAAAGGAGTGAGGAAGCAGGTGAATGCTTCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGCCTCCCGAGTCTTTAAAGGAGTGAGGAAGCAGGTGAATGCTTCG  441

seq1  CGACTCCCAGAACAGGGGGAAAACGTTCTGGCATTAAACAAAGCCTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTCCCAGAACAGGGGGAAAACGTTCTGGCATTAAACAAAGCCTTTTT  491

seq1  ATATTTAAACTGCCAGCCCAGGATTTTCAGGAAAGTTCCCCAAGCGTCGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAAACTGCCAGCCCAGGATTTTCAGGAAAGTTCCCCAAGCGTCGC  541

seq1  TGCGTGTGTGCACAAAAAATTATGCCCCGGTGTATAAACACGGTTGGATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTGTGTGCACAAAAAATTATGCCCCGGTGTATAAACACGGTTGGATG  591

seq1  CAGAAACACCAGCGTGCAGGGCCCAAGCCCCACTCGACCCGCGATCTCCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACACCAGCGTGCAGGGCCCAAGCCCCACTCGACCCGCGATCTCCG  641

seq1  TGCTCCATGTCCCGCACACCCAGCCGCACCCAGCGCACGGGAGGGGGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCATGTCCCGCACACCCAGCCGCACCCAGCGCACGGGAGGGGGTTC  691

seq1  GCTCCACAGGGCCGGAGGAGTGGGCTCCACCAAGAATTCCAGAGCCACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCACAGGGCCGGAGGAGTGGGCTCCACCAAGAATTCCAGAGCCACAG  741

seq1  GGAGGGGGAAGGAAGCCGCCGCAGGGGTTCAGAAGGGAGGGAGCCCTTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGGGAAGGAAGCCGCCGCAGGGGTTCAGAAGGGAGGGAGCCCTTCC  791

seq1  CCCATTACTAAGCTGCCCAGCTGGCAAGGTGGGGGAGAACCGGGAAGAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTACTAAGCTGCCCAGCTGGCAAGGTGGGGGAGAACCGGGAAGAAC  841

seq1  ACGGGGCGCACAGCCAGGAATCTGGGGGCAAGCACGGGATCTTTGTTGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGGCGCACAGCCAGGAATCTGGGGGCAAGCACGGGATCTTTGTTGAA  891

seq1  TGACCTGCAAGTGAAGTTCACAGGCGAGGAGCCCGGAGTCCTGTCCCCAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGCAAGTGAAGTTCACAGGCGAGGAGCCCGGAGTCCTGTCCCCAG  941

seq1  GGGCTCCTCTGAAAGCACAGGACGTGGTCAGTGCACAAGGCTCGATCGAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCCTCTGAAAGCACAGGACGTGGTCAGTGCACAAGGCTCGATCGAC  991

seq1  ATCCCCTGCCGCCAAGTCTGGACAGTGACTCCTCAGGGTCCTGGAATTC  1049
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTGCCGCCAAGTCTGGACAGTGACTCCTCAGGGTCCTGGAATTC  1040

seq1: chr8_90403685_90403938
seq2: B6Ng01-123F03.g_71_324

seq1  CAAGCAAAATGGCTTTGCACCCTACTTGGGGGTGGGAGGGATGAGGGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAAAATGGCTTTGCACCCTACTTGGGGGTGGGAGGGATGAGGGTTG  50

seq1  GGGCCTGGGTACTTCCTGCAAACACTGGGAAGCCTGCAGGAGTCCAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTGGGTACTTCCTGCAAACACTGGGAAGCCTGCAGGAGTCCAGTTT  100

seq1  CTTTTTGTTAACTAATTTCTATCTGGGCCTTCAGCTACTAGTTCCTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGTTAACTAATTTCTATCTGGGCCTTCAGCTACTAGTTCCTAAAA  150

seq1  CAGTCTGCACTGCAGCCCTCCAGTGTTTCTTCCGTGGAGACAACTTGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTGCACTGCAGCCCTCCAGTGTTTCTTCCGTGGAGACAACTTGTTA  200

seq1  CCCTCCCCTCTCCCGGTAGAAGAAGGGAGGTGTGAAATACCATCTAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CCCTCCCCTCTCCCGGTAGAAGAAGGGAGGTGTGAAATACCCTCTAAAAG  250

seq1  AGGT  254
      ||||
seq2  AGGT  254