BAC Information

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BAC

Clone NameB6Ng01-123N22
Chromosome8 (Build37)
Map Location 113,337,773 - 113,494,577
singlet/doubletdoublet
Overlap geneSf3b3, Cog4, Fuk, St3gal2
Upstream geneAp1g1, Phlppl, Marveld3, LOC100041884, Tat, Chst4, Zfp612, Gm1467, Calb2, BC025546, Hydin, LOC672398, Vac14, BC060632, 2010004A03Rik
Downstream geneDdx19a, Ddx19b, Aars, Exosc6, Mrcl, 4930402E16Rik, 9430091E24Rik, Glg1, Rfwd3, LOC547023, Mlkl, Fa2h, Wdr59, Znrf1, Ldhd, Zfp1, Ctrb1, Bcar1, Cfdp1, Tmem170, Chst5, 4932417I16Rik, Gabarapl2, Adat1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123N22.bB6Ng01-123N22.g
ACCDH926922DH926923
length1,074966
definitionDH926922|Mus musculus domesticus DNA, BAC clone: B6Ng01-123N22, 5' end.DH926923|Mus musculus domesticus DNA, BAC clone: B6Ng01-123N22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,337,773 - 113,338,846)(113,493,606 - 113,494,577)
sequence
gaattcagaatctaaaagcccagctttccctaactacaacacaacgtgca
tacatcaaaaaacaccgatctatagtaagtactgaaggctaggagttact
atgggagtaagggtggaatgggattctggagttttaaggacagggccata
tgcacgctgagcaaacgctctaccacggagctacagcaccggtccttatt
tggcttaattttctttaattgtgtatgtgtactccatgcacaagaggggt
cagaggatgactccgtccactatgaaggtcccaggaatccaacacgagcc
atcaaggttggtagcaactgccttaacctgttgatccattttatggtatc
ttgtttggctttttgagagagggtctccatgtaccccagctggccttgaa
cttacggttctcctgcctgggcttcctcagtgcttggataatgggagttc
actactacacctatagaaactattttctgtgaatcgtggaaatacatgtt
taactctcctagttaaattctttctaagtcaggataggaagctcttttgg
aggagctaagaaccaagagatgagatcacctactgcctttcaagacactc
tcaataaatgattttaagaactggtgctatcaacctgccccacaagaaca
cacttaccttattctcacactttcgaagtaacttcttcttccccaggtca
taaactcgtaaaagcttcccgacaccaatcagtaccctcccctggaatgg
ggcaatggcagcagggacctcttccactggagtctatgagaagaatatag
tgacagctttcagccacactcaccagaccctggacacagaactatttctg
taagtatcaaccaggaagacaggcagcaaacaacactgggtctactcaca
aacacactgcaactgcaacaatgaatccttacgacaaggccttgagttaa
aacagtgcccagcaggaatgcctccacggagaagcattcctaggtgcctg
gtaaatgctgctcagccttgtactagtatctaacagttgaactacagcaa
gccttaacatccaagaagccactg
gaattcaaccccctactacctggtgcgccacggaaagccctggagagtgt
ctcaccggaaccacatttctttggatggcttcactcacccacccggccta
agctggaaatgagcagttcaaggcgctcctgcccagccccagacccgcct
cttaaaaagcatcaaaattcttatccaaagcaggtttaggggagggggtc
gaggcccgccgcctcccaaggccatgattggtggagacggcggcgccgga
aattctccttgagttgcgtgattggctaagaaagaagctcctcccaactg
cagcactgattggttgctggggacggcgcagtctgattggtgggctgcaa
ccggcgcttgccggacccagaagtgactggttctgaaggcgctcagggcc
gctcagttccctcggtagacctcgatcttgctggccttggccagcatgtc
gatgatgtgggcttcgaagtcggcgtcatgcacgcctgtcttccggaact
cgcccgcgtaccggttgttctcccagtagtggtgccagttgcctcgactg
tcggccccgaacccatacacgttcacctgtgaggagggtggcacaggggt
cactgggagtcgggggcgtggttggggacacccaggcctgacataagggc
actgactcagaggggacttctgtctctttctcatttgtgtttcgcttttt
cacgactgggtcttatgtagcccaggttgggccttaaacgctgctcctgt
ctcaaactctccgtatctgattacaggtgccaccatgaccctgctaaaaa
tgtgctttttaaagaagtagttttggtagtaaatcttaaaagggtaatga
cgatgggaaatgcaaaaatttgtttataggaattacagattgataaaaat
ggttgctgttacaaaactactcccggggaaccacagctaagatgggaaag
ggctggtcctctgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_113337773_113338846
seq2: B6Ng01-123N22.b_49_1122

seq1  GAATTCAGAATCTAAAAGCCCAGCTTTCCCTAACTACAACACAACGTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAATCTAAAAGCCCAGCTTTCCCTAACTACAACACAACGTGCA  50

seq1  TACATCAAAAAACACCGATCTATAGTAAGTACTGAAGGCTAGGAGTTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCAAAAAACACCGATCTATAGTAAGTACTGAAGGCTAGGAGTTACT  100

seq1  ATGGGAGTAAGGGTGGAATGGGATTCTGGAGTTTTAAGGACAGGGCCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAGTAAGGGTGGAATGGGATTCTGGAGTTTTAAGGACAGGGCCATA  150

seq1  TGCACGCTGAGCAAACGCTCTACCACGGAGCTACAGCACCGGTCCTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACGCTGAGCAAACGCTCTACCACGGAGCTACAGCACCGGTCCTTATT  200

seq1  TGGCTTAATTTTCTTTAATTGTGTATGTGTACTCCATGCACAAGAGGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTAATTTTCTTTAATTGTGTATGTGTACTCCATGCACAAGAGGGGT  250

seq1  CAGAGGATGACTCCGTCCACTATGAAGGTCCCAGGAATCCAACACGAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGATGACTCCGTCCACTATGAAGGTCCCAGGAATCCAACACGAGCC  300

seq1  ATCAAGGTTGGTAGCAACTGCCTTAACCTGTTGATCCATTTTATGGTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGGTTGGTAGCAACTGCCTTAACCTGTTGATCCATTTTATGGTATC  350

seq1  TTGTTTGGCTTTTTGAGAGAGGGTCTCCATGTACCCCAGCTGGCCTTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGGCTTTTTGAGAGAGGGTCTCCATGTACCCCAGCTGGCCTTGAA  400

seq1  CTTACGGTTCTCCTGCCTGGGCTTCCTCAGTGCTTGGATAATGGGAGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACGGTTCTCCTGCCTGGGCTTCCTCAGTGCTTGGATAATGGGAGTTC  450

seq1  ACTACTACACCTATAGAAACTATTTTCTGTGAATCGTGGAAATACATGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTACACCTATAGAAACTATTTTCTGTGAATCGTGGAAATACATGTT  500

seq1  TAACTCTCCTAGTTAAATTCTTTCTAAGTCAGGATAGGAAGCTCTTTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCTCCTAGTTAAATTCTTTCTAAGTCAGGATAGGAAGCTCTTTTGG  550

seq1  AGGAGCTAAGAACCAAGAGATGAGATCACCTACTGCCTTTCAAGACACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTAAGAACCAAGAGATGAGATCACCTACTGCCTTTCAAGACACTC  600

seq1  TCAATAAATGATTTTAAGAACTGGTGCTATCAACCTGCCCCACAAGAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAAATGATTTTAAGAACTGGTGCTATCAACCTGCCCCACAAGAACA  650

seq1  CACTTACCTTATTCTCACACTTTCGAAGTAACTTCTTCTTCCCCAGGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTACCTTATTCTCACACTTTCGAAGTAACTTCTTCTTCCCCAGGTCA  700

seq1  TAAACTCGTAAAAGCTTCCCGACACCAATCAGTACCCTCCCCTGGAATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCGTAAAAGCTTCCCGACACCAATCAGTACCCTCCCCTGGAATGG  750

seq1  GGCAATGGCAGCAGGGACCTCTTCCACTGGAGTCTATGAGAAGAATATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATGGCAGCAGGGACCTCTTCCACTGGAGTCTATGAGAAGAATATAG  800

seq1  TGACAGCTTTCAGCCACACTCACCAGACCCTGGACACAGAACTATTTCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGCTTTCAGCCACACTCACCAGACCCTGGACACAGAACTATTTCTG  850

seq1  TAAGTATCAACCAGGAAGACAGGCAGCAAACAACACTGGGTCTACTCACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTATCAACCAGGAAGACAGGCAGCAAACAACACTGGGTCTACTCACA  900

seq1  AACACACTGCAACTGCAACAATGAATCCCTACGACAAGGCCTTGAGTTAA  950
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AACACACTGCAACTGCAACAATGAATCCTTACGACAAGGCCTTGAGTTAA  950

seq1  AACAGGTGCCCAGCAGGAATGCCTCCACGGAGAAGCATTCCTA-GTGCCT  999
      |||| |||||||||||||||||||||||||||||||||||||| ||||||
seq2  AACA-GTGCCCAGCAGGAATGCCTCCACGGAGAAGCATTCCTAGGTGCCT  999

seq1  GGTAAATGCTGCTCAGCCTTGTACTAGTTACTAACAG-TGAACTACAGCA  1048
      ||||||||||||||||||||||||||||  ||||||| ||||||||||| 
seq2  GGTAAATGCTGCTCAGCCTTGTACTAGTATCTAACAGTTGAACTACAGC-  1048

seq1  AAGCCTTAACATCCAAGAAGCCACTG  1074
      ||||||||||||||||||||||||||
seq2  AAGCCTTAACATCCAAGAAGCCACTG  1074

seq1: chr8_113493606_113494577
seq2: B6Ng01-123N22.g_66_1031 (reverse)

seq1  AAACAGAGGAAACAGCCCTTTCCCCATCTTAGCTGTGGTTCCCGGGAAGT  50
      | ||||||| | ||||||||| ||||||||||||||||||||| || |||
seq2  ATACAGAGG-ACCAGCCCTTT-CCCATCTTAGCTGTGGTTCCCCGGGAGT  48

seq1  AGTTTTTGTAAACAGAAACCATGTTTTTTCATATCTGTTATTCCTATAAA  100
      || |||||| ||||| |||||| |||| ||| |||||| |||||||||||
seq2  AG-TTTTGT-AACAGCAACCAT-TTTTATCA-ATCTGTAATTCCTATAAA  94

seq1  CAATATTTTTGCATTTCCCATCGTCATTA-CCTTTTAAGATTTACTAACA  149
      ||| ||||||||||||||||||||||||| ||||||||||||||||| ||
seq2  CAA-ATTTTTGCATTTCCCATCGTCATTACCCTTTTAAGATTTACTACCA  143

seq1  AAACTACTTCATTTAAAAGGCACATTTTTAGCAGGGTCATGGTGGCACCT  199
      |||||||||| ||||||| |||||||||||||||||||||||||||||||
seq2  AAACTACTTC-TTTAAAAAGCACATTTTTAGCAGGGTCATGGTGGCACCT  192

seq1  GTAATCAGATACGGAGAGTTTGAGACAGGAGCAGCGTTTGAGG-CCAACC  248
      ||||||||||||||||||||||||||||||||||||||| ||| ||||||
seq2  GTAATCAGATACGGAGAGTTTGAGACAGGAGCAGCGTTTAAGGCCCAACC  242

seq1  TGGGCTACATAAGACCCAGTCGTGAAAAAGCGAAACACAAATGAGAAAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTACATAAGACCCAGTCGTGAAAAAGCGAAACACAAATGAGAAAGA  292

seq1  GACAGAAGTCCCCTCTGAGTCAGTGCCCTTATGTCAGGCCTGGGTGTCCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAAGTCCCCTCTGAGTCAGTGCCCTTATGTCAGGCCTGGGTGTCCC  342

seq1  CAACCACGCCCCCGACTCCCAGTGACCCCTGTGCCACCCTCCTCACAGGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCACGCCCCCGACTCCCAGTGACCCCTGTGCCACCCTCCTCACAGGT  392

seq1  GAACGTGTATGGGTTCGGGGCCGACAGTCGAGGCAACTGGCACCACTACT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGTGTATGGGTTCGGGGCCGACAGTCGAGGCAACTGGCACCACTACT  442

seq1  GGGAGAACAACCGGTACGCGGGCGAGTTCCGGAAGACAGGCGTGCATGAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAACAACCGGTACGCGGGCGAGTTCCGGAAGACAGGCGTGCATGAC  492

seq1  GCCGACTTCGAAGCCCACATCATCGACATGCTGGCCAAGGCCAGCAAGAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGACTTCGAAGCCCACATCATCGACATGCTGGCCAAGGCCAGCAAGAT  542

seq1  CGAGGTCTACCGAGGGAACTGAGCGGCCCTGAGCGCCTTCAGAACCAGTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGTCTACCGAGGGAACTGAGCGGCCCTGAGCGCCTTCAGAACCAGTC  592

seq1  ACTTCTGGGTCCGGCAAGCGCCGGTTGCAGCCCACCAATCAGACTGCGCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGGGTCCGGCAAGCGCCGGTTGCAGCCCACCAATCAGACTGCGCC  642

seq1  GTCCCCAGCAACCAATCAGTGCTGCAGTTGGGAGGAGCTTCTTTCTTAGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCAGCAACCAATCAGTGCTGCAGTTGGGAGGAGCTTCTTTCTTAGC  692

seq1  CAATCACGCAACTCAAGGAGAATTTCCGGCGCCGCCGTCTCCACCAATCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCACGCAACTCAAGGAGAATTTCCGGCGCCGCCGTCTCCACCAATCA  742

seq1  TGGCCTTGGGAGGCGGCGGGCCTCGACCCCCTCCCCTAAACCTGCTTTGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTTGGGAGGCGGCGGGCCTCGACCCCCTCCCCTAAACCTGCTTTGG  792

seq1  ATAAGAATTTTGATGCTTTTTAAGAGGCGGGTCTGGGGCTGGGCAGGAGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAATTTTGATGCTTTTTAAGAGGCGGGTCTGGGGCTGGGCAGGAGC  842

seq1  GCCTTGAACTGCTCATTTCCAGCTTAGGCCGGGTGGGTGAGTGAAGCCAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGAACTGCTCATTTCCAGCTTAGGCCGGGTGGGTGAGTGAAGCCAT  892

seq1  CCAAAGAAATGTGGTTCCGGTGAGACACTCTCCAGGGCTTTCCGTGGCGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGAAATGTGGTTCCGGTGAGACACTCTCCAGGGCTTTCCGTGGCGC  942

seq1  ACCAGGTAGTAGGGGGTTGAATTC  972
      ||||||||||||||||||||||||
seq2  ACCAGGTAGTAGGGGGTTGAATTC  966