BAC Information

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BAC

Clone NameB6Ng01-123O22
Chromosome8 (Build37)
Map Location 110,932,830 - 111,062,360
singlet/doubletdoublet
Overlap genenone
Upstream geneNob1, Wwp2, LOC100042812, Psmd7, LOC100041744, LOC668038
Downstream geneAtbf1, 4922502B01Rik, Gm1943, LOC100042829, Pmfbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123O22.bB6Ng01-123O22.g
ACCDH926970DH926971
length1,149831
definitionDH926970|Mus musculus domesticus DNA, BAC clone: B6Ng01-123O22, 5' end.DH926971|Mus musculus domesticus DNA, BAC clone: B6Ng01-123O22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,061,202 - 111,062,360)(110,932,830 - 110,933,703)
sequence
gaattcatggtctatccttggtctctccgtgataaaggacatgtacgttc
atcgagctacatactcccctccaaccaatggtttgttccagcagaaagca
tgcaaggtatctaaagagagactgggcagcccagggtagctatctttcgc
caccttccttgcctaagccttcatgattctctgcaaggaaaacagatctt
taatatttggatttaccaagctgagtttcccgaggttctcattaaatcct
actttttatcccccatctcggcttcttccccctctgtcattatctctcct
ttgcctgtatttcttctggagcccccactctatgccccagagccctgtct
gagaggcaaatccttagccttgatgagtaggcagcaagtccccccccttg
cacacaacaaagagtctatttttccccccttgctctatcttttggacgac
acgataaaaaataaccctgtatttatgcaaattgcaaagtagcgtgtgat
aatgaaaacaaaacagggctggcccgcagccaagacatggcgttgacggg
ggctcccgaccatgtggctccgattcttcagggaaagcagctgtagagag
atgagactccacacagcaccctcctcacggcgcgcacacccacatcggca
tgcattccggtaccagtcaccttggagctggccaaacttgggggatccaa
aaagcggtcctgcttcctagcgggtgttgagctctgcagcgtcgtccccc
acgaacctccctgccccctgctcctgattccctttcaggaatttacaaac
atttttccctagatcaatatccgtattgattattcattgtgagcgagtcg
tgtgtctttggtgatccagcttgcagagggtagcagctaaagacggctgc
agggggagaaaataacagaagtgagaaggacccagctctggctgagtctg
cggctgtcacatcacagagaggaggaggaagaagaagagaatcgtccaga
atgaaacgatggagacggtgtaaaagaaagaggacgcactgcagaaaaga
aagatgtgagactgcattgtctaaggaatctcaatggcttggaggaaatg
cccatacacttggtctgctgctagtgcaaatggcaactgttcctctgct
gaattctttctcatatatgagatcctaatgtatcctagtatattttcctg
gatttcccattctgttctgatctcgcctatctccctgccaataccactta
gattggattactatgactttatatttggcaagctatatcctccgtcatat
ttcttatttttcatgctcgtatttgccgttcacgtgtaattacccttcca
ttacaactgaaggtagttttatccattttcaaaagagaaagaacgaccat
tggaattataattagaattgcatgggaaaaaaatagatatatatgccttg
taagaagagcagcaaaaaaaaaaaaaaaaaaaaaaaaaaagaagagcagc
tatttcgtaagacgaagcattcctatctgagaaaatttacctcttcctag
ttttactcacgctggtctacactcatcaatctgctccaaatcagaaacca
agcctccaatttaaacagggaaattttatagaagacttaataattagtaa
acgatcctgagctactactgagagggttacagagagcggtgaagaacacg
gacgtaccaaatgccaagcacagccgctttttctagggctgaaggcaagc
actgttgagagggatggaatgaagaccttgaaggaggagccctgagcccc
aggttgaagctcaaacctcattgaaagtgcatggttgtcccagggtgtac
aaataggctccacctccctcttatatataattgtcctacaagtgttgtgt
tgttgtggttgttgttaggatgccccgatcttgctgctttcattccgccc
gggactacgtccgcagagtggagctatgatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_111061202_111062360
seq2: B6Ng01-123O22.b_48_1196 (reverse)

seq1  AGCAGAGGAACAGCTCGGCATTTTGCACCTAGCAGCAGACCCAAGTTGAT  50
      ||||||||||||| |  ||  |||||| ||||||||||| ||||||  ||
seq2  AGCAGAGGAACAGTT--GCCATTTGCA-CTAGCAGCAGA-CCAAGTGTAT  46

seq1  GGGGCTTTCCTCCAAGCCATTGAGATCCCTAAGACCAATGCAGTCCTCAC  100
      |||  ||||||||||||||||||||| ||| ||| ||||||||| |||||
seq2  GGGCATTTCCTCCAAGCCATTGAGATTCCTTAGA-CAATGCAGT-CTCAC  94

seq1  ATCTTTCTTTCTTGCAGTTGCGTCCTCTTTCTTTTACACCCTTCTCCATC  150
      ||||||||||  ||||| |||||||||||||||||||| || ||||||||
seq2  ATCTTTCTTTTCTGCAG-TGCGTCCTCTTTCTTTTACA-CCGTCTCCATC  142

seq1  CTTTCATTCTGGACCATTCTCTTCTTCTTCCTCCTCCTCTCTGTGATGTG  200
       ||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GTTTCATTCTGGACGATTCTCTTCTTCTTCCTCCTCCTCTCTGTGATGTG  192

seq1  ACAGCCGCAGACCTCAGCCAGAGCTGGGTCCTTCTCACCTTCTGTTATTT  250
      ||||||||||| ||||||||||||||||||||||||| ||||||||| ||
seq2  ACAGCCGCAGA-CTCAGCCAGAGCTGGGTCCTTCTCA-CTTCTGTTA-TT  239

seq1  TTCTCCCCCTGCAGCCGTCTTTAGCTGCTACCCTCTGCAAGCTGGATCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCCCTGCAGCCGTCTTTAGCTGCTACCCTCTGCAAGCTGGATCAC  289

seq1  CAAAGACACACGACTCGCTCACAATGAATAATCAATACGGATATTGATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACACACGACTCGCTCACAATGAATAATCAATACGGATATTGATCT  339

seq1  AGGGAAAAATGTTTGTAAATTCCTGAAAGGGAATCAGGAGCAGGGGGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAAATGTTTGTAAATTCCTGAAAGGGAATCAGGAGCAGGGGGCAG  389

seq1  GGAGGTTCGTGGGGGACGACGCTGCAGAGCTCAACACCCGCTAGGAAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTTCGTGGGGGACGACGCTGCAGAGCTCAACACCCGCTAGGAAGCA  439

seq1  GGACCGCTTTTTGGAT-CCCCAAGTTTGGCCAGCTCCAAGGTGACTGGTA  499
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GGACCGCTTTTTGGATCCCCCAAGTTTGGCCAGCTCCAAGGTGACTGGTA  489

seq1  CCGGAATGCATGCCGATGTGGGTGTGCGCGCCGTGAGGAGGGTGCTGTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGAATGCATGCCGATGTGGGTGTGCGCGCCGTGAGGAGGGTGCTGTGT  539

seq1  GGAGTCTCATCTCTCTACAGCTGCTTTCCCTGAAGAATCGGAGCCACATG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCTCATCTCTCTACAGCTGCTTTCCCTGAAGAATCGGAGCCACATG  589

seq1  GTCGGGAGCCCCCGTCAACGCCATGTCTTGGCTGCGGGCCAGCCCTGTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGGGAGCCCCCGTCAACGCCATGTCTTGGCTGCGGGCCAGCCCTGTTT  639

seq1  TGTTTTCATTATCACACGCTACTTTGCAATTTGCATAAATACAGGGTTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCATTATCACACGCTACTTTGCAATTTGCATAAATACAGGGTTAT  689

seq1  TTTTTATCGTGTCGTCCAAAAGATAGAGCAAGGGGGGAAAAATAGACTCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATCGTGTCGTCCAAAAGATAGAGCAAGGGGGGAAAAATAGACTCT  739

seq1  TTGTTGTGTGCAAGGGGGGGGACTTGCTGCCTACTCATCAAGGCTAAGGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTGTGCAAGGGGGGGGACTTGCTGCCTACTCATCAAGGCTAAGGA  789

seq1  TTTGCCTCTCAGACAGGGCTCTGGGGCATAGAGTGGGGGCTCCAGAAGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTCTCAGACAGGGCTCTGGGGCATAGAGTGGGGGCTCCAGAAGAA  839

seq1  ATACAGGCAAAGGAGAGATAATGACAGAGGGGGAAGAAGCCGAGATGGGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGCAAAGGAGAGATAATGACAGAGGGGGAAGAAGCCGAGATGGGG  889

seq1  GATAAAAAGTAGGATTTAATGAGAACCTCGGGAAACTCAGCTTGGTAAAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAAAGTAGGATTTAATGAGAACCTCGGGAAACTCAGCTTGGTAAAT  939

seq1  CCAAATATTAAAGATCTGTTTTCCTTGCAGAGAATCATGAAGGCTTAGGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATATTAAAGATCTGTTTTCCTTGCAGAGAATCATGAAGGCTTAGGC  989

seq1  AAGGAAGGTGGCGAAAGATAGCTACCCTGGGCTGCCCAGTCTCTCTTTAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGTGGCGAAAGATAGCTACCCTGGGCTGCCCAGTCTCTCTTTAG  1039

seq1  ATACCTTGCATGCTTTCTGCTGGAACAAACCATTGGTTGGAGGGGAGTAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTTGCATGCTTTCTGCTGGAACAAACCATTGGTTGGAGGGGAGTAT  1089

seq1  GTAGCTCGATGAACGTACATGTCCTTTATCACGGAGAGACCAAGGATAGA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTCGATGAACGTACATGTCCTTTATCACGGAGAGACCAAGGATAGA  1139

seq1  CCATGAATTC  1159
      ||||||||||
seq2  CCATGAATTC  1149

seq1: chr8_110932830_110933703
seq2: B6Ng01-123O22.g_67_897

seq1  GAATTCTTTCTCATATATGAGATCCTAATGTATCCTAGTATATTTTCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTCATATATGAGATCCTAATGTATCCTAGTATATTTTCCTG  50

seq1  GATTTCCCATTCTGTTCTGATCTCGCCTATCTCCCTGCCAATACCACTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCCATTCTGTTCTGATCTCGCCTATCTCCCTGCCAATACCACTTA  100

seq1  GATTGGATTACTATGACTTTATATTTGGCAAGCTATATCCTCCGTCATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGATTACTATGACTTTATATTTGGCAAGCTATATCCTCCGTCATAT  150

seq1  TTCTTATTTTTCATGCTCGTATTTGCCGTTCACGTGTAATTACCCTTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATTTTTCATGCTCGTATTTGCCGTTCACGTGTAATTACCCTTCCA  200

seq1  TTACAACTGAAGGTAGTTTTATCCATTTTCAAAAGAGAAAGAACGACCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAACTGAAGGTAGTTTTATCCATTTTCAAAAGAGAAAGAACGACCAT  250

seq1  TGGAATTATAATTAGAATTGCATGGGAAAAAAATAGATATATATGCCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTATAATTAGAATTGCATGGGAAAAAAATAGATATATATGCCTTG  300

seq1  TAAGAAGAGCAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAGCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGAGCAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAGAGCAGC  350

seq1  TATTTCGTAAGACGAAGCATTCCTATCTGAGAAAATTTACCTCTTCCTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCGTAAGACGAAGCATTCCTATCTGAGAAAATTTACCTCTTCCTAG  400

seq1  TTTTACTCACGCTGGTCTACACTCATCAATCTGCTCCAAATCAGAAACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTCACGCTGGTCTACACTCATCAATCTGCTCCAAATCAGAAACCA  450

seq1  AGCCTCCAATTTAAACAGGGAAATTTTATAGAAGACTTAATAATTAGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCCAATTTAAACAGGGAAATTTTATAGAAGACTTAATAATTAGTAA  500

seq1  ACGATCCTGAGCTACTACTGAGAGGGTTACAGAGAGCGGTGAAGAACACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATCCTGAGCTACTACTGAGAGGGTTACAGAGAGCGGTGAAGAACACG  550

seq1  GACGTACCAAATGCCAAGCACAGCCGCTGTTTCTAGGGCTGAAGGCAAGC  600
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GACGTACCAAATGCCAAGCACAGCCGCTTTTTCTAGGGCTGAAGGCAAGC  600

seq1  ACTGTTGAGAGGGATGGAATGAAGACCTTGAAGGAAGGAGCCCTGAGCCC  650
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACTGTTGAGAGGGATGGAATGAAGACCTTGAAGG-AGGAGCCCTGAGCCC  649

seq1  CAGGTTGAAGCTCAGACCTCATTGAAAGTGCCATGGTTGTCACAGGGTGT  700
      |||||||||||||| ||||||||||||||| |||||||||| ||||||||
seq2  CAGGTTGAAGCTCAAACCTCATTGAAAGTG-CATGGTTGTCCCAGGGTGT  698

seq1  ACAAATAGGCTCCACCTCCCTCTTATATATTAAATTTGTTCCTACAAGTT  750
      ||||||||||||||||||||||||||||||  ||||   ||||||||| |
seq2  ACAAATAGGCTCCACCTCCCTCTTATATAT--AATT--GTCCTACAAG-T  743

seq1  GTTTTGTTGTTTGTTTGTTTGTTTTGTTTTTGTTTTTATGATTTGTCCCT  800
      ||| |||||              ||||  ||||| ||| ||  || ||| 
seq2  GTTGTGTTG--------------TTGTGGTTGTTGTTAGGA--TGCCCC-  776

seq1  CTGATCTTTGCTGTCCTTTTTTCCTATTCTCGTCTCTGGGTACTTACTGC  850
        |||| ||||||  ||||      ||||    | |  || |||   | |
seq2  --GATC-TTGCTG--CTTT-----CATTC----CGCCCGGGACTACGTCC  812

seq1  TCGTCAAGAGTGGAGCTATTGATT  874
       |    |||||||||||| |||||
seq2  GC----AGAGTGGAGCTA-TGATT  831