BAC Information

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BAC

Clone NameB6Ng01-124D21
Chromosome8 (Build37)
Map Location 44,146,980 - 44,213,913
singlet/doubletdoublet
Overlap genenone
Upstream geneZfp353, EG620772, LOC628212
Downstream geneTriml1, LOC622082, EG622117, LOC100039417, Zfp42, Adam26b, Adam26a, EG384813, Adam34, EG384814, LOC100039472, LOC547011, LOC622263
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124D21.bB6Ng01-124D21.g
ACCDH927198DH927199
length1,0931,138
definitionDH927198|Mus musculus domesticus DNA, BAC clone: B6Ng01-124D21, 5' end.DH927199|Mus musculus domesticus DNA, BAC clone: B6Ng01-124D21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,212,814 - 44,213,913)(44,146,980 - 44,148,131)
sequence
gaattcactctgtaggccaggctggcctcgaacacagagagatgtttccc
cctgcctcctgagtggctgggattgaagtcacatgacaacaagcccactt
ccaatttatgctatcaccctcttactgaggaacatgtagtgtgttttcta
tttgtagatataccaaatgtacctaagtctttgagtgtaagggtccctca
gctgtgtctcctgcaggcaggacagtgtctagtagatcccgtgatgccct
gtttgtacctgtatatttgtacagatatttcgtgaaggcttaagtagtcc
acctttggtattaatgcaccagcgatcacagatctcagacaagggaaaat
gcatatactctgtgccatataaccttccaagatgtactgcctggcaagaa
ttagatttatcagaaagcatttcaactctgaatctgacttactcttctga
aaatcaggaagaatgaatctactgtgaggattttgtgagaagacaaagtc
tttatgggagacaatacatttcgttggttctcctctgtccttcaaaaaat
tcttttggggttggagagagggttcagtggttaagagcactgcctgctct
ttggaaggtcctgagttcaaatcccaggaaccacatggtggcttacaacc
atccgccataatgagatctgatgctttcttctggggtgtctgaagacata
ttaataaaattaccaattgtacaatagggtcgggatcttaccaggacctc
aagcaaaggagtggcctgaaacttctctctctctctctctctctctctct
cattggatattttctttatttacattttcaagtgttttcccatttctatg
tatccccatcggaaaccctctatcccatgcccccttcctcttgcctctat
gagggtgcttcccctccccaccacccacccctctggtcttcctgcctgca
ttcatctacactgagcatcaaacacttctcaggatccaaagcctctcctc
ttacagatgtcaacaaggtcaatccttgccaattagcttcagagcatgtg
gttccctccgggtgcactcttggtgtgggttcattcccccccc
gaattcaagtgctgtcagaaaccagaagaaggtcccagatcttctggagc
tagagttacaagagtctgtaagcagtcaggtggatgttggaaaccaaact
ttagtcctctgcaacagtattaagtgctcttaacctctgagccatctgtc
ccaaccctgcccttattgtttgatcaatgagaaaattatactggaaggaa
ataaacaataagatatgctttactaattacatattaaagccagataaaat
gatgtatattatgccaaatgaatgtgtaaagttgtcaagacagaaaatat
agctcaaaaaatggaaagtgaaacacataaacacatttataaaacatgaa
agcaaatgcaaattaaagtacattcccctttcaaatctcttcaattagga
aaagatattttaaacgataatatctcttgctggcaagggaataaagaaat
ggtactctcacacatctctgattgcatttttaaatgctccaacactttag
gaaagcgatttggcattatattaagagtcataaaaatatttcatactttg
tgtgccagatccccatttatgtaaatctgccttaagggaatactccaaaa
caaggaaaatgttataaattcaactcagtattatttattatggcttcaaa
tagaaaaaaaaaattaaattcccaatgataaaacaactgaagtttcagca
catttaatcattaggatatcgtgcataccaatagaattagtccttgtaaa
cactatgtaacaatatcccaaagtactaatagcatcaatgataatggata
agtcctttatactcttggagcaattataagaataaataagacaaaacatg
tgactattttaaaaacgcatattatttgtgcagtctacaaaagtaagtat
gtatgtgggcaaagatgatatgtttaccaaatggccttaaataatactaa
gcatgatggagtttgtttttatctttctgcacatatttaaggcatttagc
aacttataattctaaatataccttgtagaatgtctttattatttgtagga
gcttagcaagatcggtacaataaactggaaattccaagcacttaactttt
ctctgtaggtaactgggcagaggaaaattgaatcaata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_44212814_44213913
seq2: B6Ng01-124D21.b_44_1136 (reverse)

seq1  GGGGGGGGAATGGACCACCAACCAAAGAGTGCACACGGAGGGACCCA-TG  49
      |||||||||||| ||  |||  | |||||||||| |||||||| |||   
seq2  GGGGGGGGAATGAAC--CCACACCAAGAGTGCACCCGGAGGGAACCACAT  48

seq1  GCTCCTGACGCATATGTGGCAAAGGATGGCCTTGTTGGACATCTGTGAGA  99
      ||| |||| || ||  |||||| |  || ||||||| ||||||||| |||
seq2  GCT-CTGAAGC-TAATTGGCAAGGATTGACCTTGTT-GACATCTGTAAGA  95

seq1  GGAGAGGCTTTTGGTCCTGAG-AGTGTTTGTTGCTCCAGTGTAGATGAAT  148
      ||||||||||| | ||||||| |||||||| |||| ||||||||||||||
seq2  GGAGAGGCTTTGGATCCTGAGAAGTGTTTGATGCT-CAGTGTAGATGAAT  144

seq1  GCCAGGGCAGGAAGACAGGAGGGGTGGGTGGGTGGGGGAGGGGAAGCACC  198
      ||   |||||||||||  |||||||||||||   ||||||||||||||||
seq2  GC--AGGCAGGAAGACCAGAGGGGTGGGTGG--TGGGGAGGGGAAGCACC  190

seq1  CTCATAGAGGCAAGAGGAAGGGGGCATGGGATAGAGGGTTTCCGATGGGG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAGAGGCAAGAGGAAGGGGGCATGGGATAGAGGGTTTCCGATGGGG  240

seq1  ATACATAGAAATGGGAAAACACTTG-AAATGTAAATAAAGAAAATATCCA  297
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATACATAGAAATGGGAAAACACTTGAAAATGTAAATAAAGAAAATATCCA  290

seq1  ATGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGTTTCAGGCCACTCCTTTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGTTTCAGGCCACTCCTTTG  340

seq1  CTTGAGGTCCTGGTAAGATCCCGACCCTATTGTACAATTGGTAATTTTAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGGTCCTGGTAAGATCCCGACCCTATTGTACAATTGGTAATTTTAT  390

seq1  TAATATGTCTTCAGACACCCCAGAAGAAAGCATCAGATCTCATTATGGCG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATGTCTTCAGACACCCCAGAAGAAAGCATCAGATCTCATTATGGCG  440

seq1  GATGGTTGTAAGCCACCATGTGGTTCCTGGGATTTGAACTCAGGACCTTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTGTAAGCCACCATGTGGTTCCTGGGATTTGAACTCAGGACCTTC  490

seq1  CAAAGAGCAGGCAGTGCTCTTAACCACTGAACCCTCTCTCCAACCCCAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGCAGGCAGTGCTCTTAACCACTGAACCCTCTCTCCAACCCCAAA  540

seq1  AGAATTTTTTGAAGGACAGAGGAGAACCAACGAAATGTATTGTCTCCCAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTTTTGAAGGACAGAGGAGAACCAACGAAATGTATTGTCTCCCAT  590

seq1  AAAGACTTTGTCTTCTCACAAAATCCTCACAGTAGATTCATTCTTCCTGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTTTGTCTTCTCACAAAATCCTCACAGTAGATTCATTCTTCCTGA  640

seq1  TTTTCAGAAGAGTAAGTCAGATTCAGAGTTGAAATGCTTTCTGATAAATC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGAAGAGTAAGTCAGATTCAGAGTTGAAATGCTTTCTGATAAATC  690

seq1  TAATTCTTGCCAGGCAGTACATCTTGGAAGGTTATATGGCACAGAGTATA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTTGCCAGGCAGTACATCTTGGAAGGTTATATGGCACAGAGTATA  740

seq1  TGCATTTTCCCTTGTCTGAGATCTGTGATCGCTGGTGCATTAATACCAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTTCCCTTGTCTGAGATCTGTGATCGCTGGTGCATTAATACCAAA  790

seq1  GGTGGACTACTTAAGCCTTCACGAAATATCTGTACAAATATACAGGTACA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGACTACTTAAGCCTTCACGAAATATCTGTACAAATATACAGGTACA  840

seq1  AACAGGGCATCACGGGATCTACTAGACACTGTCCTGCCTGCAGGAGACAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGGCATCACGGGATCTACTAGACACTGTCCTGCCTGCAGGAGACAC  890

seq1  AGCTGAGGGACCCTTACACTCAAAGACTTAGGTACATTTGGTATATCTAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGGGACCCTTACACTCAAAGACTTAGGTACATTTGGTATATCTAC  940

seq1  AAATAGAAAACACACTACATGTTCCTCAGTAAGAGGGTGATAGCATAAAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAAAACACACTACATGTTCCTCAGTAAGAGGGTGATAGCATAAAT  990

seq1  TGGAAGTGGGCTTGTTGTCATGTGACTTCAATCCCAGCCACTCAGGAGGC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGTGGGCTTGTTGTCATGTGACTTCAATCCCAGCCACTCAGGAGGC  1040

seq1  AGGGGGAAACATCTCTCTGTGTTCGAGGCCAGCCTGGCCTACAGAGTGAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGAAACATCTCTCTGTGTTCGAGGCCAGCCTGGCCTACAGAGTGAA  1090

seq1  TTC  1100
      |||
seq2  TTC  1093

seq1: chr8_44146980_44148131
seq2: B6Ng01-124D21.g_67_1204

seq1  GAATTCAAGTGCTGTCAGAAACCAGAAGAAGGTCCCAGATCTTCTGGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTGCTGTCAGAAACCAGAAGAAGGTCCCAGATCTTCTGGAGC  50

seq1  TAGAGTTACAAGAGTCTGTAAGCAGTCAGGTGGATGTTGGAAACCAAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTTACAAGAGTCTGTAAGCAGTCAGGTGGATGTTGGAAACCAAACT  100

seq1  TTAGTCCTCTGCAACAGTATTAAGTGCTCTTAACCTCTGAGCCATCTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCCTCTGCAACAGTATTAAGTGCTCTTAACCTCTGAGCCATCTGTC  150

seq1  CCAACCCTGCCCTTATTGTTTGATCAATGAGAAAATTATACTGGAAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCCTGCCCTTATTGTTTGATCAATGAGAAAATTATACTGGAAGGAA  200

seq1  ATAAACAATAAGATATGCTTTACTAATTACATATTAAAGCCAGATAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAATAAGATATGCTTTACTAATTACATATTAAAGCCAGATAAAAT  250

seq1  GATGTATATTATGCCAAATGAATGTGTAAAGTTGTCAAGACAGAAAATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTATATTATGCCAAATGAATGTGTAAAGTTGTCAAGACAGAAAATAT  300

seq1  AGCTCAAAAAATGGAAAGTGAAACACATAAACACATTTATAAAACATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAAAAAATGGAAAGTGAAACACATAAACACATTTATAAAACATGAA  350

seq1  AGCAAATGCAAATTAAAGTACATTCCCCTTTCAAATCTCTTCAATTAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATGCAAATTAAAGTACATTCCCCTTTCAAATCTCTTCAATTAGGA  400

seq1  AAAGATATTTTAAACGATAATATCTCTTGCTGGCAAGGGAATAAAGAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATATTTTAAACGATAATATCTCTTGCTGGCAAGGGAATAAAGAAAT  450

seq1  GGTACTCTCACACATCTCTGATTGCATTTTTAAATGCTCCAACACTTTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTCTCACACATCTCTGATTGCATTTTTAAATGCTCCAACACTTTAG  500

seq1  GAAAGCGATTTGGCATTATATTAAGAGTCATAAAAATATTTCATACTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCGATTTGGCATTATATTAAGAGTCATAAAAATATTTCATACTTTG  550

seq1  TGTGCCAGATCCCCATTTATGTAAATCTGCCTTAAGGGAATACTCCAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCAGATCCCCATTTATGTAAATCTGCCTTAAGGGAATACTCCAAAA  600

seq1  CAAGGAAAATGTTATAAATTCAACTCAGTATTATTTATTATGGCTTCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAAAATGTTATAAATTCAACTCAGTATTATTTATTATGGCTTCAAA  650

seq1  TAGAAAAAAAAAATTAAATTCCCAATGATAAAACAACTGAAGTTTCAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAAAAAAATTAAATTCCCAATGATAAAACAACTGAAGTTTCAGCA  700

seq1  CATTTAATCATTAGGATATCGTGCATACCAATAGAATTAGTCCTTGTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAATCATTAGGATATCGTGCATACCAATAGAATTAGTCCTTGTAAA  750

seq1  CACTATGTAACAATAT-CCAAAGTACTAATAGCATCAATGATAAATGGAT  799
      |||||||||||||||| ||||||||||||||||||||||||| |||||||
seq2  CACTATGTAACAATATCCCAAAGTACTAATAGCATCAATGAT-AATGGAT  799

seq1  AAGTCC-TTATACTCTTGGAGCAATTATAAGAATAAATTAAGACAAAACA  848
      |||||| |||||||||||||||||||||||||||||| ||||||||||||
seq2  AAGTCCTTTATACTCTTGGAGCAATTATAAGAATAAA-TAAGACAAAACA  848

seq1  TGTGACTATTTTAAAAACGCATATTATTTGTGCAGTTCTACAAAAGTAAG  898
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGTGACTATTTTAAAAACGCATATTATTTGTGCAG-TCTACAAAAGTAAG  897

seq1  TATGTATGTGGGCAAAGATGAATATGTTTACCAAATGGCCTTAAATAAAT  948
      |||||||||||||||||||| ||||||||||||||||||||||||| |||
seq2  TATGTATGTGGGCAAAGATG-ATATGTTTACCAAATGGCCTTAAAT-AAT  945

seq1  ACTTAAGCATGATGGAGTTTGGTTTTTATCTTTCTGCACAATATTTATAG  998
      || ||||||||||||||||| |||||||||||||||||| ||||||| ||
seq2  AC-TAAGCATGATGGAGTTT-GTTTTTATCTTTCTGCAC-ATATTTA-AG  991

seq1  GCATGTAGCACTTTATAAATTCTAAATATAACTTGTAGAATGTCTTAATT  1048
      |||| |||||  |||| ||||||||||||| ||||||||||||||| |||
seq2  GCATTTAGCAACTTAT-AATTCTAAATATACCTTGTAGAATGTCTTTATT  1040

seq1  ATTTGTAGGAGCTTAAGCAAAGATCGAGTACAATATACTGGGAAATTTCT  1098
      |||||||||||||| ||| ||||||| |||||||| |||||  || ||| 
seq2  ATTTGTAGGAGCTT-AGC-AAGATCG-GTACAATAAACTGG--AAATTCC  1085

seq1  AAGTACTTTTACTTTTCTCTG-AAGTAACTTGGTCAAGAGAAAATTGAAT  1147
      ||| || || ||||||||||| | ||||| ||| ||   |||||||||||
seq2  AAGCAC-TTAACTTTTCTCTGTAGGTAAC-TGGGCAGAGGAAAATTGAAT  1133

seq1  CAATA  1152
      |||||
seq2  CAATA  1138