BAC Information

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BAC

Clone NameB6Ng01-124H11
Chromosome8 (Build37)
Map Location 66,093,906 - 66,095,086
singlet/doubletsinglet
Overlap genenone
Upstream geneSpock3
Downstream geneLOC384831, EG244495, Tll1, LOC100040989, Cpe
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124H11.bB6Ng01-124H11.g
ACCDH927366DH927367
length1,1671,069
definitionDH927366|Mus musculus domesticus DNA, BAC clone: B6Ng01-124H11, 5' end.DH927367|Mus musculus domesticus DNA, BAC clone: B6Ng01-124H11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttcaggacacgggaactatattatattagtatttcagttatat
tgtttaggctttaagtaaccattgaatacttttttgcaaatagatggaat
taaattttggtaattacatgatctattagaaaagcaagtctacactcata
ggaaagaggataataaagtaaaaatgtaagagaattccccaattgttgat
taggacctaagtgcaaatgcatatttgtgagtgcagtcttacctgtgtta
attagtaaattttatgcaagttggaaatcacaagcacacatgatccaagg
gtctgaaggaaataatgaatggtttaagtatatgactagagagaaaactc
tcagagtctagagacatattattttcttttacttccttgttgtaaatttt
aaatagacacagatggtgacccattacaaatttacaacagcctgaaataa
cctagctgagtgttggtaaatggctataaatgtcactatttgtttctttt
tgcagatttaccccagagcatcccatatacatgttgggtatataacacat
tgcaaactttataagaaagggaacacagatgctagccctctaatcttttc
tcataatgggagaattttaaatgttgttttctccatattatttactaagg
actcctaaagtaagattttctacctgttgccagagtcaaatattacttaa
tagaacatagtaataaaaattaagaatatgggtaataattctttgtatga
agcttattgaacaacattcacataaagtttcctaaaaattactcaataaa
aagctaaattaattatgatattacttctttgaagacactaaaatatatga
agttcacaagtcaccctctcttttttgtcataattcacatgaaacagatg
aaatttttgtaggaaagatatttttttaaaataaaccgtgttaaatagtt
ctgtgctaaatctgcagtggaagaatgctgcttggcttaacttttgcttg
atttttggtttggactttgctttcagtgatttaaatttggattcattatt
tcaaattattcgttctgttttgggttttcataaattgcagagattcactc
ttaacatggctacattttaggacctttgagaaatcccttttgggaatcaa
gacgatttctaactctt
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagttcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaaa
ggagaatgaagactgaagtgtgggacactatgcccctccttagatttggg
aacaaaacacccatggaggagttacagagacggagtttggagctgagatg
aaaggatggaccatgtagagactgccatagccagggatccaccccataat
cagcatccaaacgctgacaccattgcatacactagcaagatttttattga
aaggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaa
tcaaagagttggatgctcacagtcagctaatggatggatcatagtgctcc
caatggaagagctagaggaagtagccaaggagctaaagggatctgcaccc
ctataggtggaacacattattgagctaacccgaccccggagtcttgaatc
ttgccgctattataccaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_66093906_66095086
seq2: B6Ng01-124H11.b_42_1208 (reverse)

seq1  AAGAGTTAGAAATTGCTTTTGTATTCACAAAAAGGATATTTTTCTCAAAA  50
      ||||||||||||| | | ||| |||| ||||| |||    ||||||||| 
seq2  AAGAGTTAGAAATCG-TCTTG-ATTCCCAAAAGGGA----TTTCTCAAA-  43

seq1  GGGTCCCTAAAATGTAGCCAATGTTAAGAGTGAATCTTTGCAATTTATGA  100
       ||| |||||||||||||| ||||||||||||||||| ||||||||||||
seq2  -GGT-CCTAAAATGTAGCC-ATGTTAAGAGTGAATCTCTGCAATTTATGA  90

seq1  AAAACAATAACAAGAACAAATAATATGAAAATAATGAAATCAAATCTAAA  150
      ||| | | ||| ||||| |||||| || ||||||||||  ||||| ||||
seq2  AAACCCAAAAC-AGAACGAATAATTTG-AAATAATGAATCCAAATTTAAA  138

seq1  ACACTGAAAAGCAAAGTTCCAAACCAAAAATCAAGCAAAAGTTAAGCCAA  200
       ||||| ||||||||| |||||||||||||||||||||||||||||||||
seq2  TCACTG-AAAGCAAAG-TCCAAACCAAAAATCAAGCAAAAGTTAAGCCAA  186

seq1  GCAGCATTCTTCCACTGCAGATTTAGCACAGAACTATTTAACACGGTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCATTCTTCCACTGCAGATTTAGCACAGAACTATTTAACACGGTTTA  236

seq1  TTTTAAAAAAATATCTTTCCTACAAAAATTTCATCTGTTTCATGTGAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAAAATATCTTTCCTACAAAAATTTCATCTGTTTCATGTGAATT  286

seq1  ATGACAAAAAAGAGAGGGTGACTTGTGAACTTCATATATTTTAGTGTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAAAAAAGAGAGGGTGACTTGTGAACTTCATATATTTTAGTGTCTT  336

seq1  CAAAGAAGTAATATCATAATTAATTTAGCTTTTTATTGAGTAATTTTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAGTAATATCATAATTAATTTAGCTTTTTATTGAGTAATTTTTAG  386

seq1  GAAACTTTATGTGAATGTTGTTCAATAAGCTTCATACAAAGAATTATTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTTATGTGAATGTTGTTCAATAAGCTTCATACAAAGAATTATTAC  436

seq1  CCATATTCTTAATTTTTATTACTATGTTCTATTAAGTAATATTTGACTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTCTTAATTTTTATTACTATGTTCTATTAAGTAATATTTGACTCT  486

seq1  GGCAACAGGTAGAAAATCTTACTTTAGGAGTCCTTAGTAAATAATATGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACAGGTAGAAAATCTTACTTTAGGAGTCCTTAGTAAATAATATGGA  536

seq1  GAAAACAACATTTAAAATTCTCCCATTATGAGAAAAGATTAGAGGGCTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAACATTTAAAATTCTCCCATTATGAGAAAAGATTAGAGGGCTAG  586

seq1  CATCTGTGTTCCCTTTCTTATAAAGTTTGCAATGTGTTATATACCCAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTGTTCCCTTTCTTATAAAGTTTGCAATGTGTTATATACCCAACA  636

seq1  TGTATATGGGATGCTCTGGGGTAAATCTGCAAAAAGAAACAAATAGTGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATGGGATGCTCTGGGGTAAATCTGCAAAAAGAAACAAATAGTGAC  686

seq1  ATTTATAGCCATTTACCAACACTCAGCTAGGTTATTTCAGGCTGTTGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAGCCATTTACCAACACTCAGCTAGGTTATTTCAGGCTGTTGTAA  736

seq1  ATTTGTAATGGGTCACCATCTGTGTCTATTTAAAATTTACAACAAGGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTAATGGGTCACCATCTGTGTCTATTTAAAATTTACAACAAGGAAG  786

seq1  TAAAAGAAAATAATATGTCTCTAGACTCTGAGAGTTTTCTCTCTAGTCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAAAATAATATGTCTCTAGACTCTGAGAGTTTTCTCTCTAGTCAT  836

seq1  ATACTTAAACCATTCATTATTTCCTTCAGACCCTTGGATCATGTGTGCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTAAACCATTCATTATTTCCTTCAGACCCTTGGATCATGTGTGCTT  886

seq1  GTGATTTCCAACTTGCATAAAATTTACTAATTAACACAGGTAAGACTGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTCCAACTTGCATAAAATTTACTAATTAACACAGGTAAGACTGCA  936

seq1  CTCACAAATATGCATTTGCACTTAGGTCCTAATCAACAATTGGGGAATTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAAATATGCATTTGCACTTAGGTCCTAATCAACAATTGGGGAATTC  986

seq1  TCTTACATTTTTACTTTATTATCCTCTTTCCTATGAGTGTAGACTTGCTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACATTTTTACTTTATTATCCTCTTTCCTATGAGTGTAGACTTGCTT  1036

seq1  TTCTAATAGATCATGTAATTACCAAAATTTAATTCCATCTATTTGCAAAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATAGATCATGTAATTACCAAAATTTAATTCCATCTATTTGCAAAA  1086

seq1  AAGTATTCAATGGTTACTTAAAGCCTAAACAATATAACTGAAATACTAAT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTCAATGGTTACTTAAAGCCTAAACAATATAACTGAAATACTAAT  1136

seq1  ATAATATAGTTCCCGTGTCCTGAAGGAATTC  1181
      |||||||||||||||||||||||||||||||
seq2  ATAATATAGTTCCCGTGTCCTGAAGGAATTC  1167