BAC Information

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BAC

Clone NameB6Ng01-124J14
Chromosome2 (Build37)8 (Build37)
Map Location 19,434,232 - 19,435,41238,167,178 - 38,167,986
singlet/doubletsingletsinglet
Overlap gene4921504E06Rik
Upstream geneLOC625815, Commd3, Bmi1, EG667477, LOC100041448, BC061194, LOC667493, LOC100041479, Pip5k2a, 4930426L09Rik, LOC667521, Armc3, Msrb2, LOC100041196, Ptf1a, LOC100041534
Downstream geneLOC100041244, Otud1, LOC667564, LOC100041302, LOC433406, LOC654360, LOC667609, Etl4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124J14.bB6Ng01-124J14.g
ACCDH927464DH927465
length1,1691,006
definitionDH927464|Mus musculus domesticus DNA, BAC clone: B6Ng01-124J14, 5' end.DH927465|Mus musculus domesticus DNA, BAC clone: B6Ng01-124J14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(19,434,232 - 19,435,412)(38,167,178 - 38,167,986)
sequence
gaattcttaaagcaccgaccctttggtctgagtgaccctgtccggtgtgc
cttcctcttatgaactccccgcctgctgaaagcatacaccttgcccttta
agaagcggcttcttgctgttcttaagattcctttctgttccctcagactc
agatctatctggcttccaactcaatgcctttcttttggctggctttaacc
ctcctaccacccaagctgagcagccgagcttgcctccttcagttgctccg
cttgctggctatcacatttctactatgctctcagcctcctgatctgccac
atactagaataaggtctcaagaagagattttgaggtggcagtagatggaa
aacaggcttataaactctcttgttaaattaaatacgaattttgaattaca
acatgaaagctactgaattccactctgtggggtgcttatcccagactcat
tctcatcttcagcttgttcttttattacacctactgcttaaggaaggagc
ttgtgtctcagttgaagctttggagtttgtcatttccattctttgttttt
ctgcctgccccctctccaggttccggtcatcctctttctgctctaccacg
ggttctcatcttgtcatctcaacatgtccctatgacatgagccagccatg
ccacatttccagaagtcctacaacacacctcacactgcacactcacactt
ggctgccaccttctatgccctcctgctctctggagaataacagctcaggc
atccctctcaagagggctatgtgagaaaaagaatggaactggttgcaaag
gggttctagaacctacaagttgaaaccaggcttctcttctccatgtatca
ccctgctctttggtcttggtctgctcttcccagcagccaaccctacctct
gcagagtgtgtgtgtgtgtgtgtatgtgtacatacaaacatttatttttt
tttctagcacaggcacagtgtgtgacactcaaaaacacccaataacaaca
cattgaactaatttactgaaaggtattgggaacaagcaaacaaggtctgt
tctttcttgtcaaccaggctgactgctctcccagttgaacaaccacctcc
gacataattattctctcaaacattgtaagcctgggataaaagaaggcttg
tgagagggtaagaactagt
gaattcctcttggtagactttcccgttgatgagtatcaagggtccctcct
catcttttttgatacctttaggttgacaggccattttattcaggatggta
atgtctactcctgcttgtttcttgggaccatttgcttggaaaattgtctt
ccatcttcttactctgaggtagtgtcggtctatgtccctgacgtggtttt
tctgtatgcgaaaaaatgtcgggtcctgtttacataaccagtgggggcaa
ggaccatgttttattggggaattgagtcctttgtttttaatatgtattaa
ggaaaagggttgttgcttcctgttatttttgttgttaggttggaattttg
gtcatgttgctattgtcttttaagtttgccgaaggatcactttcttgcgt
tttctggagcatgtggaccccgctttgtcttggagttgtccctatattat
cctatgatgggttggatttgtggacagatgacgtgtcacctagcaagatg
tgtttatgaaccacgcacacccctgcaagaaacatccgaaacatcagccg
atgatcctggacgagtgtaggaggggacatctaggggggagactacacaa
gactcctacagtcacaagaacctttccggtactgtgaaagtcatgcccta
gaaaaaacaccttttcccagggcaagaagttcaagcccctattgtaggca
ttcagaccagatagcttgtccccttgtagtcggaaacagtgttctggatg
gggtaaagccatgtcttcagcctgagggactgaagccacccagtctccaa
ggaaatagggtcagtcttctcacgttggaagtacttcttgcagcagaagc
cagccggaccccctcagaggagaggagatcaggcacaagatgtcttcaaa
cctctggacgagattctgcctaaaatgcgtcttcctcagcgaatcaatac
aacatctcctcaggaccatctcagcgctccggaagaaacatctaaactaa
gtcgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_19434232_19435412
seq2: B6Ng01-124J14.b_42_1210

seq1  GAATTCAGAAAGCATCCGACCCTTTGGTATGAGTGACCCTGTCCAGTGTG  50
      ||||||  |||||| ||||||||||||| ||||||||||||||| |||||
seq2  GAATTCTTAAAGCA-CCGACCCTTTGGTCTGAGTGACCCTGTCCGGTGTG  49

seq1  CCTTCCTCTTATGCACTCCCCAGCTGCTGAAAGCATACACCTTGCCCTTT  100
      ||||||||||||| |||||||  |||||||||||||||||||||||||||
seq2  CCTTCCTCTTATGAACTCCCCGCCTGCTGAAAGCATACACCTTGCCCTTT  99

seq1  AAGAAGCGGCTTCTTGCTGTTCTTAGGATTCCTTTCTGTTCCCTCAGTCT  150
      ||||||||||||||||||||||||| ||||||||||||||||||||| ||
seq2  AAGAAGCGGCTTCTTGCTGTTCTTAAGATTCCTTTCTGTTCCCTCAGACT  149

seq1  CAGCTCTATCTGGCTTCCAGCTCAATGCCTTTCTTTTGGCTGGCTTTAAC  200
      ||| ||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CAGATCTATCTGGCTTCCAACTCAATGCCTTTCTTTTGGCTGGCTTTAAC  199

seq1  CCTCCTACCACCCAAGCTGAGCAGCCGAGCTTGCCTCCTTCAGTTGCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTACCACCCAAGCTGAGCAGCCGAGCTTGCCTCCTTCAGTTGCTCC  249

seq1  GCTTGCTGGCTATCACATTTCTACTATGCTCTCAGCCTCCTGATCTGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTGGCTATCACATTTCTACTATGCTCTCAGCCTCCTGATCTGCCA  299

seq1  CATACTAGAATAAGGTCTCAAGAAGAGATTTTGAGGTGGCAGTAGATGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTAGAATAAGGTCTCAAGAAGAGATTTTGAGGTGGCAGTAGATGGA  349

seq1  AAACAGGCTTATAAACTCTCTTGTTAAATTAAATACGAATTTTGAATTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGGCTTATAAACTCTCTTGTTAAATTAAATACGAATTTTGAATTAC  399

seq1  AACATGAAAGCTACTGAATTCCACTCTGTGGGGTGCTTATCCCAGACTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAAAGCTACTGAATTCCACTCTGTGGGGTGCTTATCCCAGACTCA  449

seq1  TTCTCATCTTCAGCTTGTTCTTTTATTACACCTACTGCTTAAGGAAGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATCTTCAGCTTGTTCTTTTATTACACCTACTGCTTAAGGAAGGAG  499

seq1  CTTGTGTCTCAGTTGAAGCTTTGGAGTTTGTCATTTCCATTCTTTGTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGTCTCAGTTGAAGCTTTGGAGTTTGTCATTTCCATTCTTTGTTTT  549

seq1  TCTGCCTGCCCCCTCTCCAGGTTCCGGTCATCCTCTTTCTGCTCTACCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTGCCCCCTCTCCAGGTTCCGGTCATCCTCTTTCTGCTCTACCAC  599

seq1  GGGTTCTCATCTTGTCATCTCAACATGTCCCTATGACATGAGCCAGCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCTCATCTTGTCATCTCAACATGTCCCTATGACATGAGCCAGCCAT  649

seq1  GCCACATTTCCAGAAGTCCTACAACACACCTCACACTGCACACTCACACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACATTTCCAGAAGTCCTACAACACACCTCACACTGCACACTCACACT  699

seq1  TGGCTGCCACCTTCTATGCCCTCCTGCTCTCTGGAGAATAACAGCTCAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCCACCTTCTATGCCCTCCTGCTCTCTGGAGAATAACAGCTCAGG  749

seq1  CATCCCTCTCAAGAGGGCTATGTGAGAAAAAGAATGGAACTGGTTGCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCTCTCAAGAGGGCTATGTGAGAAAAAGAATGGAACTGGTTGCAAA  799

seq1  GGGGTTCTAGAACCTACAAGTTGAAACCAGGCTTCTCTTCTCCATGTATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTCTAGAACCTACAAGTTGAAACCAGGCTTCTCTTCTCCATGTATC  849

seq1  ACCCTGCTCTTTGGTCTTGGTCTGCTCCTTCCCAGCAGCCAACCCCACCC  900
      |||||||||||||||||||||||||| |||||||||||||||||| ||| 
seq2  ACCCTGCTCTTTGGTCTTGGTCTGCT-CTTCCCAGCAGCCAACCCTACCT  898

seq1  CTGCAAGAGTGTGTGTGTGTGTGTGTATGTGTACATACAAACATTTATTT  950
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGC-AGAGTGTGTGTGTGTGTGTGTATGTGTACATACAAACATTTATTT  947

seq1  TTTTTTCTAGCACAAGCACAGTGTGTGACACTCAAAAACACCCAATAAAC  1000
      |||||||||||||| ||||||||||||||||||||||||||||||| |||
seq2  TTTTTTCTAGCACAGGCACAGTGTGTGACACTCAAAAACACCCAAT-AAC  996

seq1  AACACCATTGAACTAATTTACTGAAAGGTATTGGGAACAAAGCAAACAAG  1050
      |||| ||||||||||||||||||||||||||||||||| |||||||||||
seq2  AACA-CATTGAACTAATTTACTGAAAGGTATTGGGAAC-AAGCAAACAAG  1044

seq1  GTCTGTTCTTTCTTGTTCAACAAGGTCTGACCTGCT-TCCCAGTTGACAA  1099
      ||||||||||||||| ||||| ||| |||| ||||| ||||||||||  |
seq2  GTCTGTTCTTTCTTG-TCAACCAGG-CTGA-CTGCTCTCCCAGTTGAACA  1091

seq1  ACCACCTTCACAAACATTATTATCTCTCT-AAACATAGTAAGCCTGGGAT  1148
      |||||||   |  |||| ||||| ||||| |||||| |||||||||||||
seq2  ACCACCT---CCGACATAATTAT-TCTCTCAAACATTGTAAGCCTGGGAT  1137

seq1  AAAGAGAAAGGCGTGGGAG-TGGCAAGAACTAGT  1181
      ||| || ||||| || |||  || ||||||||||
seq2  AAA-AG-AAGGCTTGTGAGAGGGTAAGAACTAGT  1169

seq1: chr8_38167178_38167986
seq2: B6Ng01-124J14.g_306_1072

seq1  AGTGGGGGCAAGGACCATGCCCCTGACCCTAATCCAAGCTTGA--CTATA  48
      |||||||||||||||||||          || |      ||||  |  | 
seq2  AGTGGGGGCAAGGACCATG-------TTTTATTGGGGAATTGAGTCCTTT  43

seq1  GTCTTCAAAAGAATCTTTCAGGGCAAATCTGTGGTG------GAAGGCCC  92
      || || ||    || | | | || |||    || ||      |       
seq2  GTTTTTAA---TATGTATTAAGGAAAAGGGTTGTTGCTTCCTGTTATTTT  90

seq1  TGAGGACAGGCAGACATTAGTTGGGCCCAGTGGC--TTGCCAAAGAA-TA  139
      ||  |  |||  |  ||   || || |  || ||  ||| |    || | 
seq2  TGTTGTTAGGTTGGAAT---TTTGGTCATGTTGCTATTGTCTTTTAAGTT  137

seq1  GCCCCAAGGCAACAGCAAAGGAGGCCCAAGGGAAGAAGTGGAC-------  182
        || |||| | ||         |      |||  | ||||||       
seq2  TGCCGAAGG-ATCACTTTCTTGCGTTTTCTGGAGCATGTGGACCCCGCTT  186

seq1  ---AATGGAGTTGCTTAACAAGGCTAGAAAGCAAACAGAAAAAGCCTCAT  229
           ||||||||          ||| |     | |  |  | |  |   
seq2  TGTCTTGGAGTTG-------TCCCTATA---TTATCCTATGATGGGTTGG  226

seq1  ATCTAATAGACGTCAGACATCTCCCCAAGCAAGAGGTGTTTATGAACAAC  279
      || |  | |||    ||| | || || ||||||| |||||||||||| ||
seq2  AT-TTGTGGACAGATGACGTGTCACCTAGCAAGATGTGTTTATGAACCAC  275

seq1  ACACACCCCTGCAAGAAACATCCGAAACAGCAACCAATGAGCCTGGAGGA  329
       |||||||||||||||||||||||||||| || || |||| |||||| ||
seq2  GCACACCCCTGCAAGAAACATCCGAAACATCAGCCGATGATCCTGGACGA  325

seq1  GTGTAGGAGGGGACATCTA-GGGGGAGACAACACAGGACTCCTACAGTCA  378
      ||||||||||||||||||| ||||||||| ||||| ||||||||||||||
seq2  GTGTAGGAGGGGACATCTAGGGGGGAGACTACACAAGACTCCTACAGTCA  375

seq1  CAAGAACCTTTCCGGTACTGTGAAAGTCTTGCCCTAGAAGAAAACACCTT  428
      |||||||||||||||||||||||||||| |||||||||| ||||||||||
seq2  CAAGAACCTTTCCGGTACTGTGAAAGTCATGCCCTAGAA-AAAACACCTT  424

seq1  TTCCCAGGGCAAGAAGTTCAAG-CCCTATTGTAGGCATTCAGACCAGATA  477
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTCCCAGGGCAAGAAGTTCAAGCCCCTATTGTAGGCATTCAGACCAGATA  474

seq1  GCTTGTCCCCTTGTAGTCGGAGAGCAGTGTTCTGGAGAGGGGTAGAAGCC  527
      ||||||||||||||||||||| | ||||||||||||  |||||| |||||
seq2  GCTTGTCCCCTTGTAGTCGGA-AACAGTGTTCTGGA-TGGGGTA-AAGCC  521

seq1  AATGTCTTCAGGCCAAGAGGGACTGAAAGCCACCCAAGTCTCCAAAGGAA  577
       ||||||||||  |  ||||||||| ||||||||| ||||||| ||||||
seq2  -ATGTCTTCAG--CCTGAGGGACTG-AAGCCACCC-AGTCTCC-AAGGAA  565

seq1  AGAAGGCACAGTCTTCTCAACGGTTGGAAGTAACTTCCTTGCAGGCAGAA  627
      |  |||  |||||||||||   ||||||||| |||| |||||| ||||||
seq2  A-TAGGGTCAGTCTTCTCA--CGTTGGAAGT-ACTT-CTTGCA-GCAGAA  609

seq1  GCCAAGCCGGAGCCCCTCAAGAGGAGGAGGAGGATGCAGGGCACAGAGAT  677
      ||| ||||||| |||||| |||||| ||||| ||| || |||||| ||||
seq2  GCC-AGCCGGACCCCCTC-AGAGGA-GAGGA-GAT-CA-GGCACA-AGAT  652

seq1  GTCCTCCAAACCTCATGACAGAGGACTCTGCCTACAAAAGTCAGTCTTCC  727
      || || ||||||||  ||| || || |||||||   ||| |  |||||||
seq2  GT-CTTCAAACCTCTGGAC-GA-GATTCTGCCT---AAAATGCGTCTTCC  696

seq1  TCAGCAGAGATCAAATACAACCATCTCCTCAGGACCTTCATCAGGGCGCT  777
      ||||| || ||| ||||||| ||||||||||||||| || |||  |||||
seq2  TCAGC-GA-ATC-AATACAA-CATCTCCTCAGGACCATC-TCA--GCGCT  739

seq1  CCGGAAAGAAACAACATAAAACCTAAGTCGTG  809
      |||| |||||||| | ||||  ||||||||||
seq2  CCGG-AAGAAACATC-TAAA--CTAAGTCGTG  767