BAC Information

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BAC

Clone NameB6Ng01-125H12
Chromosome8 (Build37)
Map Location 87,311,255 - 87,311,606
singlet/doubletsinglet
Overlap geneNfix
Upstream geneEG384857, Lphn1, Asf1b, Prkaca, Samd1, 1700067K01Rik, 2210011C24Rik, 4432412L15Rik, Il27ra, Rln3, C330011M18Rik, Rfx1, BC057552, LOC100039920, Podnl1, Cc2d1a, 4930432K21Rik, Nanos3, Zswim4, D8Ertd738e, 2410018C20Rik, Ccdc130, Cacna1a, Ier2, LOC100039975, Btbd14b, Trmt1, LOC100039997, Lyl1
Downstream geneDand5, Gadd45gip1, Rad23a, Calr, LOC546080, Farsa, Syce2, Gcdh, Klf1, Dnase2a, Mast1, Rtbdn, Rnaseh2a, LOC666841, Prdx2, Junb, Hook2, Best2, Asna1, 2310036O22Rik, Tnpo2, Fbxw9, EG436049, Dhps, 1500041N16Rik, BC056474, Man2b1, EG244556, EG624855, Olfr371, Vps35, Orc6l, D830007F02Rik, 4921524J17Rik, Gpt2, Dnaja2, Neto2, Itfg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125H12.bB6Ng01-125H12.g
ACCDH928098DH928099
length1,077352
definitionDH928098|Mus musculus domesticus DNA, BAC clone: B6Ng01-125H12, 5' end.DH928099|Mus musculus domesticus DNA, BAC clone: B6Ng01-125H12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggtcagcctcaagtacctaacaagttcaaggctgccttggtt
atagtaaagtgttttaaagttgggcatggtggtacatgactttaatccca
gcccttggaaaacagatgcaggcatatctctctgagctccaggctgagac
tctgtcaaaatgggtgttggtgctggagagctggctgctctttctagaag
atctgggtttcatttcctagcattcaccttctcagtcacaaacacagttc
tagaggacccaacactcactcccaaccatcatggacatgcggcatgagag
tggcacagagttacacacaggcagaacatgcacacactttaaaacaatat
agaaataacaaaagccgtaaagaaggtttagttcaagagcccttgctgct
ctcgggatgatacagactctgttcccatgctagagggtggaggttgagtg
tgagcagggggtattcaaaaacatctgtaactgcagattcagaggaccca
gtgcctcactctccccagacacctatactcaagctgtgttctggtgtgtg
cacacaggcacgcatgcatgtgcacacacacacacacacacacacacaca
cacgcacagatacaccatttatacaattaaaaagaaaaagtaaagaggga
agctggttagggatacagcccagggttagtgcttgcttagtatgggagag
aacctggtttcaagtctcagtaaggttgaaaaaaaaaaaaaagataagag
acaacacccaaactgactgcctttgggaacaatgatgcttgtgctaagaa
ccagacaaggatgagcttggcatgttgggtacacccctttaatcccagca
ctcggggaggcagaggcaggcagatctctgagttcaaggccagcctggtc
tacagagtgagtttcaggacagccaggctacacaaaaacccctgtttcaa
aaaactacctacaacaaaaaacccaaaagcactgagcaaggacttcggta
tgggacagggtggaagctcaactgaagaaactatcatgttgggcctggct
attgttagaataaaggactatacccaa
ctaggagaagagcctgggggagagggctgaggctgaaaagatgaccctcc
accactacttgatctaacctagccccatggggcagctgggttcatggcct
ctgtttccttttctgtaaaagatgctattgatagctgctgcctcttgtta
aaaaggtggcagatcacaggtgcttctgcctgcctgcctgcctaccccct
gccctgtgtatctgctctggggatgggtccctagctgttattttgattgt
gagggatctatggctgtgacaagctgtgacgcttggtgtgatcgcatgag
gctggctgtgtgactgtgcctgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_87311255_87311606
seq2: B6Ng01-125H12.g_73_424

seq1  CTAGGAGAAGAGCCTGGGGGAGAGGGCTGAGGCTGAAAAGATGACCCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAGAAGAGCCTGGGGGAGAGGGCTGAGGCTGAAAAGATGACCCTCC  50

seq1  ACCACTACTTGATCTAACCTAGCCCCATGGGGCAGCTGGGTTCATGGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTACTTGATCTAACCTAGCCCCATGGGGCAGCTGGGTTCATGGCCT  100

seq1  CTGTTTCCTTTTCTGTAAAAGATGCTATTGATAGCTGCTGCCTCTTGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCCTTTTCTGTAAAAGATGCTATTGATAGCTGCTGCCTCTTGTTA  150

seq1  AAAAGGTGGCAGATCACAGGTGCTTCTGCCTGCCTGCCTGCCTACCCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTGGCAGATCACAGGTGCTTCTGCCTGCCTGCCTGCCTACCCCCT  200

seq1  GCCCTGTGTATCTGCTCTGGGGATGGGTCCCTAGCTGTTATTTTGATTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGTGTATCTGCTCTGGGGATGGGTCCCTAGCTGTTATTTTGATTGT  250

seq1  GAGGGATCTATGGCTGTGACAAGCTGTGACGCTTGGTGTGATCGCATGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGATCTATGGCTGTGACAAGCTGTGACGCTTGGTGTGATCGCATGAG  300

seq1  GCTGGCTGTGTGACTGTGCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTGTGTGACTGTGCCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  350

seq1  TG  352
      ||
seq2  TG  352