BAC Information

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BAC

Clone NameB6Ng01-126B01
Chromosome8 (Build37)
Map Location 72,430,231 - 72,577,786
singlet/doubletdoublet
Overlap geneGatad2a, LOC665649, 9130404D08Rik, Sf4
Upstream geneLpl, LOC100041138, Slc18a1, Atp6v1b2, Lzts1, EG665540, D10627, LOC665553, D130040H23Rik, LOC665561, LOC670593, EG665578, LOC622336, LOC100041482, LOC673968, AI449175, EG636741, 1200003I07Rik, D330038O06Rik, Atp13a1, Gmip, Edg4, Pbx4, Cilp2, BC028663, Ndufa13, Tssk6
Downstream geneTm6sf2, Hapln4, Ncan, Rfxank, 2310073E15Rik, 2310045N01Rik, Mef2b, Tmem161a, Slc25a42, Armc6, Sfrs14, Homer3, Ddx49, Cope, Lass1, Upf1, Comp, Crtc1, Klhl26, Tmem59l, Crlf1, 2810428I15Rik, Uba52, Fkbp8, Ell, Isyna1, Ssbp4, Lrrc25, Gdf15, Pgpep1, Lsm4, Jund1, 2410018E23Rik, LOC100041434, Pde4c, Rab3a, BC051227, Ifi30, Pik3r2, LOC100041971, Mast3, Il12rb1, Arrdc2, Kcnn1, LOC100042011, Ccdc124, Slc5a5, Rpl18a, Snora68, Mtap1s
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126B01.bB6Ng01-126B01.g
ACCDH928531DH928532
length1,0591,111
definitionDH928531|Mus musculus domesticus DNA, BAC clone: B6Ng01-126B01, 5' end.DH928532|Mus musculus domesticus DNA, BAC clone: B6Ng01-126B01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,576,734 - 72,577,786)(72,430,231 - 72,431,362)
sequence
gaattcaagatcatccttagatacataacaagttgagcccagtgtaagct
acatgagatcctgtgtcaaaaattaaacatgggaggcatagcatggcagt
gcaggcctttcactcttagtctggggaagtagaggcaggtgggtccctgt
cacaggaattcatttctggcaaacctggtctatgtgatgagctctaggcc
agccacggctacatagtgataccctgtctcatcaaaggcactgtgggctg
aaaaagatggattggtggttaagagatggcttgctatgctatgcaaacat
aagactccggatccccagccccagctcccacatggaaaacattctggaca
atggtggtgcatgcctttagtcatagcacttaggagccagaagcaggtgg
atcttaatttgaggccaaccgggtctacaaattgagtctgggaatagggt
taacagggctgttaaaaaaacaacatcaacaaaacaaaacaaaacaaaaa
caaacaaaaatgatgaaacaggaagcctgttgattcaggtaaagaggata
tacactttgtcaactttctttctttttttgttttttttcgagacagggtt
tctctgtgtagccttggctgtcctggaactcactctgtagaccaggctgg
tcgtgaactcagaaatctgcctgcctctgcctcctaaatgctgggattaa
aggcgtgcaccaccactgcagcactttgtcaacttttaaaggaacatgtg
gcacagggttgacaatgatcctcttgcccacagactataaaatgaaagag
gatgaggggaagggcagcgcagttatctgtgtgatgctaagtgtaggaaa
cattggctagattatggcactcaataaactccttgtggaaacctgaatac
tgggtgacttgttaccttccaggaatcctgcaccagccgcagcaggcaag
aatgtgttatctctgaaccatttgggcattctcaagcgagcttatgtatg
gagtacaaacccactcattaccctcatgggaatccccgtggccattatga
agacatgta
gaattccaggtcagccaggctaagggaaggcccttgctgaacagaacact
gtttcacagctctgaaatcaccatctttgcctcagtcctttgggtgttgg
gatgacaaatatgaagcacagctagagcctctgactcagtattcaacccc
ctcctccccacaccatggcagtatgtgctgagggtgtctcagaggtggca
ctggcacatgcaggcaagataccgatacacactgcttttttattgagaca
gtgtaagtagccctgtttcggaaatcactttgtagactaggttagcctta
aactcacatacctctgcttcctgagtgctgggttaaaggtgacatcatca
gtcctggcttaattttattgagtgctttgtttgcatgtctgtgcactgtg
tgtacagtgcctgtggaggccagagactggagttacatatggttgtaagc
tgctgttagtgctaggaatagatcccgtgtcctctggaagagcagccagc
acttttggccacagagacatctctccagtcaccagcttcttttaagtaaa
atatttccaatggtgctggatgcctgtcattcctgcagcctgagctacta
agatcctgcctcaaaacaaaatcaaatatggaactgagcatctcaaggga
tgcagacctgattctgtatggagcccacagctatctgtgcagggaagaaa
ataccggggtccaaagaaattaaagaacaatacagttgacatttggtcca
tttctttattgtccttcagggtttcagacttccccatgacacagtgacta
ccaattttcagctcatttattggacatctattccagtttggtggcacttt
aaaaaacatgtactgtcaaaggttcagtcacataaatacaagtagcactg
ccccaatcccataccctgcactagtgtacttacacatgaggatcagaaac
tgacactttttggaacatccaaggtcttcaagctgacatgactcatggcg
aggaccactctacctcacagcattcagctgactcagttgcatggagtttt
gttacagccagcattacatccttactactgcctgggcagcttgctttcct
ggggtggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_72576734_72577786
seq2: B6Ng01-126B01.b_50_1108 (reverse)

seq1  TACATGTC-TCATAATGGGCACGGAGGATTCCCAATGGGGT-ATGAGTGG  48
      |||||||| ||||||||| ||||| |||||||||   |||| ||||||||
seq2  TACATGTCTTCATAATGGCCACGG-GGATTCCCATGAGGGTAATGAGTGG  49

seq1  G-TTGTACTCCAATAC-TAAGCTCGCTTGAG-ATGCCCAAATTGTGTCAG  95
      | ||||||||| |||| |||||||||||||| |||||||||| || ||||
seq2  GTTTGTACTCC-ATACATAAGCTCGCTTGAGAATGCCCAAATGGT-TCAG  97

seq1  AAGATGACACATTCTGGCCTGCTGCGGCTGGTGCAGGA-TCCTGGAGGTA  144
       |||| ||||||||| |||||||||||||||||||||| ||||||| |  
seq2  -AGATAACACATTCTTGCCTGCTGCGGCTGGTGCAGGATTCCTGGAAGGT  146

seq1  AACAAGTCACCCAGTAATCAGGTTTCCAC-AGGAGTTTATTGAGTGCCAT  193
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  AACAAGTCACCCAGTATTCAGGTTTCCACAAGGAGTTTATTGAGTGCCAT  196

seq1  -ATCTAGCCAATGTTTCCTACACTTAGCATCACACAGATAACTGCGCTGC  242
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAGCCAATGTTTCCTACACTTAGCATCACACAGATAACTGCGCTGC  246

seq1  CCTTCCCCTCATCCTCTTTCA-TTTATAGTCTGTGGGC-AGAGGATCATT  290
      ||||||||||||||||||||| |||||||||||||||| |||||||||||
seq2  CCTTCCCCTCATCCTCTTTCATTTTATAGTCTGTGGGCAAGAGGATCATT  296

seq1  GTCAACCCTGTGCCACATGTTCCTTTAAAAGTTGACAAAGTGCTGCAGTG  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACCCTGTGCCACATGTTCCTTTAAAAGTTGACAAAGTGCTGCAGTG  346

seq1  GTGGTGCACGCCTTTAATCCCAGCATTTAGGAGGCAGAGGCAGGCAGATT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGCACGCCTTTAATCCCAGCATTTAGGAGGCAGAGGCAGGCAGATT  396

seq1  TCTGAGTTCACGACCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTTCACGACCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAA  446

seq1  GGCTACACAGAGAAACCCTGTCTCGAAAAAAAACAAAAAAAGAAAGAAAG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACACAGAGAAACCCTGTCTCGAAAAAAAACAAAAAAAGAAAGAAAG  496

seq1  TTGACAAAGTGTATATCCTCTTTACCTGAATCAACAGGCTTCCTGTTTCA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAAGTGTATATCCTCTTTACCTGAATCAACAGGCTTCCTGTTTCA  546

seq1  TCATTTTTGTTTGTTTTTGTTTTGTTTTGTTTTGTTGATGTTGTTTTTTT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTGTTTGTTTTTGTTTTGTTTTGTTTTGTTGATGTTGTTTTTTT  596

seq1  AACAGCCCTGTTAACCCTATTCCCAGACTCAATTTGTAGACCCGGTTGGC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCCCTGTTAACCCTATTCCCAGACTCAATTTGTAGACCCGGTTGGC  646

seq1  CTCAAATTAAGATCCACCTGCTTCTGGCTCCTAAGTGCTATGACTAAAGG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATTAAGATCCACCTGCTTCTGGCTCCTAAGTGCTATGACTAAAGG  696

seq1  CATGCACCACCATTGTCCAGAATGTTTTCCATGTGGGAGCTGGGGCTGGG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACCACCATTGTCCAGAATGTTTTCCATGTGGGAGCTGGGGCTGGG  746

seq1  GATCCGGAGTCTTATGTTTGCATAGCATAGCAAGCCATCTCTTAACCACC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCGGAGTCTTATGTTTGCATAGCATAGCAAGCCATCTCTTAACCACC  796

seq1  AATCCATCTTTTTCAGCCCACAGTGCCTTTGATGAGACAGGGTATCACTA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATCTTTTTCAGCCCACAGTGCCTTTGATGAGACAGGGTATCACTA  846

seq1  TGTAGCCGTGGCTGGCCTAGAGCTCATCACATAGACCAGGTTTGCCAGAA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCCGTGGCTGGCCTAGAGCTCATCACATAGACCAGGTTTGCCAGAA  896

seq1  ATGAATTCCTGTGACAGGGACCCACCTGCCTCTACTTCCCCAGACTAAGA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTCCTGTGACAGGGACCCACCTGCCTCTACTTCCCCAGACTAAGA  946

seq1  GTGAAAGGCCTGCACTGCCATGCTATGCCTCCCATGTTTAATTTTTGACA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAGGCCTGCACTGCCATGCTATGCCTCCCATGTTTAATTTTTGACA  996

seq1  CAGGATCTCATGTAGCTTACACTGGGCTCAACTTGTTATGTATCTAAGGA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATCTCATGTAGCTTACACTGGGCTCAACTTGTTATGTATCTAAGGA  1046

seq1  TGATCTTGAATTC  1053
      |||||||||||||
seq2  TGATCTTGAATTC  1059

seq1: chr8_72430231_72431362
seq2: B6Ng01-126B01.g_67_1177

seq1  GAATTCCAGGTCAGCCAGGCTAAGGGAAGGCCCTTGCTGAACAGAACACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTCAGCCAGGCTAAGGGAAGGCCCTTGCTGAACAGAACACT  50

seq1  GTTTCACAGCTCTGAAATCACCATCTTTGCCTCAGTCCTTTGGGTGTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCACAGCTCTGAAATCACCATCTTTGCCTCAGTCCTTTGGGTGTTGG  100

seq1  GATGACAAATATGAAGCACAGCTAGAGCCTCTGACTCAGTATTCAACCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACAAATATGAAGCACAGCTAGAGCCTCTGACTCAGTATTCAACCCC  150

seq1  CTCCTCCCCACACCATGGCAGTATGTGCTGAGGGTGTCTCAGAGGTGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCCACACCATGGCAGTATGTGCTGAGGGTGTCTCAGAGGTGGCA  200

seq1  CTGGCACATGCAGGCAAGATACCGATACACACTGCTTTTTTATTGAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCACATGCAGGCAAGATACCGATACACACTGCTTTTTTATTGAGACA  250

seq1  GTGTAAGTAGCCCTGTTTCGGAAATCACTTTGTAGACTAGGTTAGCCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAGTAGCCCTGTTTCGGAAATCACTTTGTAGACTAGGTTAGCCTTA  300

seq1  AACTCACATACCTCTGCTTCCTGAGTGCTGGGTTAAAGGTGACATCATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACATACCTCTGCTTCCTGAGTGCTGGGTTAAAGGTGACATCATCA  350

seq1  GTCCTGGCTTAATTTTATTGAGTGCTTTGTTTGCATGTCTGTGCACTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGGCTTAATTTTATTGAGTGCTTTGTTTGCATGTCTGTGCACTGTG  400

seq1  TGTACAGTGCCTGTGGAGGCCAGAGACTGGAGTTACATATGGTTGTAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAGTGCCTGTGGAGGCCAGAGACTGGAGTTACATATGGTTGTAAGC  450

seq1  TGCTGTTAGTGCTAGGAATAGATCCCGTGTCCTCTGGAAGAGCAGCCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTAGTGCTAGGAATAGATCCCGTGTCCTCTGGAAGAGCAGCCAGC  500

seq1  ACTTTTGGCCACAGAGACATCTCTCCAGTCACCAGCTTCTTTTAAGTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGGCCACAGAGACATCTCTCCAGTCACCAGCTTCTTTTAAGTAAA  550

seq1  ATATTTCCAATGGTGCTGGATGCCTGTCATTCCTGCAGCCTGAGCTACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCCAATGGTGCTGGATGCCTGTCATTCCTGCAGCCTGAGCTACTA  600

seq1  AGATCCTGCCTCAAAACAAAATCAAATATGGAACTGAGCATCTCAAGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCTGCCTCAAAACAAAATCAAATATGGAACTGAGCATCTCAAGGGA  650

seq1  TGCAGACCTGATTCTGTATGGAGCCCACAGCTATCTGTGCAGGGAAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGACCTGATTCTGTATGGAGCCCACAGCTATCTGTGCAGGGAAGAAA  700

seq1  ATACCGGGGTCCAAAGAAATTAAAGAACAATACAGTTGACATTTGGTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCGGGGTCCAAAGAAATTAAAGAACAATACAGTTGACATTTGGTCCA  750

seq1  TTTCTTTATTGTCCTTCAGGGTTTCAGACTTCCCCATGACACAGTGACTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTATTGTCCTTCAGGGTTTCAGACTTCCCCATGACACAGTGACTA  800

seq1  CCAA-TTTCAGCTCATTTATTGGAACATCTATTCCAGTTTGGTGGCACTT  849
      |||| |||||||||||||||||| ||||||||||||||||||||||||||
seq2  CCAATTTTCAGCTCATTTATTGG-ACATCTATTCCAGTTTGGTGGCACTT  849

seq1  TAAAAAAACATGTACTGTCAAAGGTTCAGTCACAATAAATACAAGTAGCA  899
      | ||||||||||||||||||||||||||||||| ||||||||||||||| 
seq2  T-AAAAAACATGTACTGTCAAAGGTTCAGTCAC-ATAAATACAAGTAGC-  896

seq1  ACTGCCCCAATCCCCATACCCTGCACTAGTGTAACTTACACATTGAGGAT  949
      ||||||||||| |||||||||||||||||||| ||||||||| |||||||
seq2  ACTGCCCCAAT-CCCATACCCTGCACTAGTGT-ACTTACACA-TGAGGAT  943

seq1  CAGAAAACTGACCACTTTTTGGAAACAATCCAAGGTCTTCAGGCTGACAT  999
      ||| ||||||| ||||||||||||   |||||||||||||| ||||||||
seq2  CAG-AAACTGA-CACTTTTTGGAA--CATCCAAGGTCTTCAAGCTGACAT  989

seq1  GACTCATGGCGAGGACCACTCTTACCCTCAACAGCATTCAGGCTGACTCA  1049
      ||||||||||||||||||||||   |||| |||||||||| |||||||||
seq2  GACTCATGGCGAGGACCACTCT--ACCTC-ACAGCATTCA-GCTGACTCA  1035

seq1  G-TGCATGGAGGTGTTTGTTACAGCCAGCATTTACAATCCTTACTACTGC  1098
      | |||||||||   |||||||||||||||| |||| ||||||||||||||
seq2  GTTGCATGGAG--TTTTGTTACAGCCAGCA-TTAC-ATCCTTACTACTGC  1081

seq1  CTGGGGCAAGCTTTGGCTTCCCTGGGGTGGTGGG  1132
      |||||   |||||  |||| ||||||||||||||
seq2  CTGGG--CAGCTT--GCTTTCCTGGGGTGGTGGG  1111