BAC Information

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BAC

Clone NameB6Ng01-126H02
Chromosome8 (Build37)
Map Location 90,117,629 - 90,244,042
singlet/doubletdoublet
Overlap geneZfp423
Upstream geneLonp2, Siah1a, ENSMUSG00000074178, BC004022, LOC666960, EG625298, EG330819, Cbln1, LOC100040294, 4933402J07Rik
Downstream geneLOC100040328, 5033428A16Rik, Heatr3, Papd5, Adcy7, Brd7, LOC100040369, Nkd1, 9130017C17Rik, Nod2, Cyld
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126H02.bB6Ng01-126H02.g
ACCDH928812DH928813
length1,142937
definitionDH928812|Mus musculus domesticus DNA, BAC clone: B6Ng01-126H02, 5' end.DH928813|Mus musculus domesticus DNA, BAC clone: B6Ng01-126H02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,242,873 - 90,244,042)(90,117,629 - 90,118,570)
sequence
gtgtgaggaggaaggaggagctggctcaaggacatcagtgttttctacac
acactcaggcatacacacacatgcatgcacacacgggcacatgctgcaca
taagccctttgcattcatgtgcacacacaagcgtacatacatctgcacct
aaacatatacctaagctatagtttacgaaagagaaataagaaaacaaacg
ctttgccctgaatgtcacccgtgtattttccccaagtgtcagcttttttt
ggtgaatttgctcatctgttttattcaagtgtcgagcagcctgtacccct
agaaacacggtgactttatttttattaagttccaagcaggaaggaagcca
ggaggcaggagaggcgaaggaggggagcaagatccgggcttggcttccct
cagagtagccgcgcaggtctgccttcagcgtgctctgtggacctgcctcg
gtttttatccagccattgttcatttctccacggcgtttgcacactgtggc
gcgtctggggaatttcagcagttggaatatacatgaaaagagttccgctc
cactttcataaggtccctggacggctcggacgaggcctcaaggccccatg
gtgaagccggcaacccattcgtattccttccatcaccacacacacggtag
cacgaagcccagaccaatcgaaaacttgacagtaagccttttgattttgc
ggggaaaccttcatcacgctgcgagagggaagggaatatagcccaaactg
gacttcatactgtggcgagcttgaaatcccagccccaccgcagagccggc
tgattggaatagttggaaactgtgtccaggaattcggctgcaagaacttg
gctcacagcaacttctgcctttttgaaagaaaaattgtcaactgggagag
ccacttggggcctggtttaatctgtccaggcagcaaagattcacggaatg
attggccagtttcctaaatgtttcaagctctgcttatgtgggattctggg
ggcagtgagcagagcaagcagcatgctgctggtgatgctgtcatcgtgca
caatatgcattgtcactgcgtctcactattgctatttgctatcgcactgc
tgcttgtgagaaagcctaggttagttcagacaagcaatacgg
gaattcctggaaacccttgggccagttaacagcaaaagagaccctgtcca
agcaacatggaagatgaaaagtcagggttctcctctgacctccacactca
tactgtggcaagcccaccattgacaacagccccctccccacacacacaca
ccacagttaaaccgtgtgtggaggtgtacatctgtcacctcagcatcagg
gtgactaagatgagtttaaggccaacctgggttacacaggtagaccagat
ctcaagtagaagctaagaaaaatacaaataaaacagttatactcagactt
ttggtaacaatgttctggttttctgtttgaaaaacaaaagcctcagccgg
gcgtggtggcgcacgcctttaatcccagcactcgggaggcagaggcaggc
gggtttctgagttcgaggccagcctggtctacagagtgagttccaggaca
accagggctacacagagaaaccctgtctcaaaaaaccaaaaaaaaaaaaa
aagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaatgata
gaaagaaagaaagaaagaaagatagatagaaagaaagaaggaaagaaaga
gaagaaaaacaaaagcctcaaccttaaaggtggtcttccttcctacctgt
cttccctcctctttcttccctcccaagcattttccctctagaggccacct
aggtggcgctcgatcctagcagaagatgctctgctcaaggcacccacaga
tgtccactcagctgctaacctagctgtaggcccatccaaaggtggcagga
cattccagactgagctctgggtgtcacaatgcatgcagctgttcacaccc
agctgagggcctctggcatgtccttcttcaaggcttgtggattcccccac
cccaaaataggatcaaaatgtatttcagaccagtggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_90242873_90244042
seq2: B6Ng01-126H02.b_55_1196 (reverse)

seq1  CCGTATGGCTTTGTCTGAACCTTTAACTCTGCTCTCTCACAAGCAGCAGG  50
      |||||| || ||||||||||  | | ||  ||| ||||||||||||||| 
seq2  CCGTATTGC-TTGTCTGAAC--TAACCTAGGCTTTCTCACAAGCAGCAG-  46

seq1  TTGGCGATTAGCAAAATAGCAATAGTGAAGACGCAGGTGACAATGGCCAT  100
         |||| |||| |||||||||||||| ||||||| |||||||||  |||
seq2  --TGCGA-TAGC-AAATAGCAATAGTG-AGACGCA-GTGACAATG--CAT  88

seq1  AATTGTGGCAACGATGACAGCCATCACCAGGCCAGCCTTGCTGCTTGCTT  150
       ||||||   |||||||||| |||||||||  ||| | ||||||||||| 
seq2  -ATTGTG--CACGATGACAG-CATCACCAG--CAG-CATGCTGCTTGCT-  130

seq1  CTTGCTCACTGCCCCCAGAATCCCCACATAAGCAGGAGCTTGAAACATTT  200
        ||||||||||||||||||| |||||||||||| |||||||||||| ||
seq2  -CTGCTCACTGCCCCCAGAAT-CCCACATAAGCA-GAGCTTGAAACA-TT  176

seq1  TAGGAAAACTTGGCCAATCATTTCCGTGAATCTTTGCTGCCTGGACAGAT  250
      |||||||   |||||||||| |||||||||||||||||||||||||||||
seq2  TAGGAAA--CTGGCCAATCA-TTCCGTGAATCTTTGCTGCCTGGACAGAT  223

seq1  TAAACCCAGGCCCCAAGTGGCTCTCCCAGTTGACAATTTTTCTTTCAAAA  300
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAA-CCAGGCCCCAAGTGGCTCTCCCAGTTGACAATTTTTCTTTCAAAA  272

seq1  AGGCAGAAGTTGCTGTGAGCCAAGTTCTTGCAGCCGAATTCCTGGACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAAGTTGCTGTGAGCCAAGTTCTTGCAGCCGAATTCCTGGACACA  322

seq1  GTTTCCAACTATTCCAATCAGCCGGCTCTGCGGTGGGGCTGGGATTTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCAACTATTCCAATCAGCCGGCTCTGCGGTGGGGCTGGGATTTCAA  372

seq1  GCTCGCCACAGTATGAAGTCCAGTTTGGGCTATATTCCCTTCCCTCTCGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGCCACAGTATGAAGTCCAGTTTGGGCTATATTCCCTTCCCTCTCGC  422

seq1  AGCGTGATGAAGGTTTCCCCGCAAAATCAAAAGGCTTACTGTCAAGTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTGATGAAGGTTTCCCCGCAAAATCAAAAGGCTTACTGTCAAGTTTT  472

seq1  CGATTGGTCTGGGCTTCGTGCTACCGTGTGTGTGGTGATGGAAGGAATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTGGTCTGGGCTTCGTGCTACCGTGTGTGTGGTGATGGAAGGAATAC  522

seq1  GAATGGGTTGCCGGCTTCACCATGGGGCCTTGAGGCCTCGTCCGAGCCGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGGTTGCCGGCTTCACCATGGGGCCTTGAGGCCTCGTCCGAGCCGT  572

seq1  CCAGGGACCTTATGAAAGTGGAGCGGAACTCTTTTCATGTATATTCCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGACCTTATGAAAGTGGAGCGGAACTCTTTTCATGTATATTCCAAC  622

seq1  TGCTGAAATTCCCCAGACGCGCCACAGTGTGCAAACGCCGTGGAGAAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAATTCCCCAGACGCGCCACAGTGTGCAAACGCCGTGGAGAAATG  672

seq1  AACAATGGCTGGATAAAAACCGAGGCAGGTCCACAGAGCACGCTGAAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGGCTGGATAAAAACCGAGGCAGGTCCACAGAGCACGCTGAAGGC  722

seq1  AGACCTGCGCGGCTACTCTGAGGGAAGCCAAGCCCGGATCTTGCTCCCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTGCGCGGCTACTCTGAGGGAAGCCAAGCCCGGATCTTGCTCCCCT  772

seq1  CCTTCGCCTCTCCTGCCTCCTGGCTTCCTTCCTGCTTGGAACTTAATAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCGCCTCTCCTGCCTCCTGGCTTCCTTCCTGCTTGGAACTTAATAAA  822

seq1  AATAAAGTCACCGTGTTTCTAGGGGTACAGGCTGCTCGACACTTGAATAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGTCACCGTGTTTCTAGGGGTACAGGCTGCTCGACACTTGAATAA  872

seq1  AACAGATGAGCAAATTCACCAAAAAAAGCTGACACTTGGGGAAAATACAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATGAGCAAATTCACCAAAAAAAGCTGACACTTGGGGAAAATACAC  922

seq1  GGGTGACATTCAGGGCAAAGCGTTTGTTTTCTTATTTCTCTTTCGTAAAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGACATTCAGGGCAAAGCGTTTGTTTTCTTATTTCTCTTTCGTAAAC  972

seq1  TATAGCTTAGGTATATGTTTAGGTGCAGATGTATGTACGCTTGTGTGTGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCTTAGGTATATGTTTAGGTGCAGATGTATGTACGCTTGTGTGTGC  1022

seq1  ACATGAATGCAAAGGGCTTATGTGCAGCATGTGCCCGTGTGTGCATGCAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAATGCAAAGGGCTTATGTGCAGCATGTGCCCGTGTGTGCATGCAT  1072

seq1  GTGTGTGTATGCCTGAGTGTGTGTAGAAAACACTGATGTCCTTGAGCCAG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTATGCCTGAGTGTGTGTAGAAAACACTGATGTCCTTGAGCCAG  1122

seq1  CTCCTCCTTCCTCCTCACAC  1170
      ||||||||||||||||||||
seq2  CTCCTCCTTCCTCCTCACAC  1142

seq1: chr8_90117629_90118570
seq2: B6Ng01-126H02.g_67_1003

seq1  GAATTCCTGGAAACCCTTGGGCCAGTTAACAGCAAAAGAGACCCTGTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGAAACCCTTGGGCCAGTTAACAGCAAAAGAGACCCTGTCCA  50

seq1  AGCAACATGGAAGATGAAAAGTCAGGGTTCTCCTCTGACCTCCACACTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACATGGAAGATGAAAAGTCAGGGTTCTCCTCTGACCTCCACACTCA  100

seq1  TACTGTGGCAAGCCCACCATTGACAACAGCCCCCTCCCCACACACACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGGCAAGCCCACCATTGACAACAGCCCCCTCCCCACACACACACA  150

seq1  CCACAGTTAAACCGTGTGTGGAGGTGTACATCTGTCACCTCAGCATCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTTAAACCGTGTGTGGAGGTGTACATCTGTCACCTCAGCATCAGG  200

seq1  GTGACTAAGATGAGTTTAAGGCCAACCTGGGTTACACAGGTAGACCAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTAAGATGAGTTTAAGGCCAACCTGGGTTACACAGGTAGACCAGAT  250

seq1  CTCAAGTAGAAGCTAAGAAAAATACAAATAAAACAGTTATACTCAGACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGTAGAAGCTAAGAAAAATACAAATAAAACAGTTATACTCAGACTT  300

seq1  TTGGTAACAATGTTCTGGTTTTCTGTTTGAAAAACAAAAGCCTCAGCCGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAACAATGTTCTGGTTTTCTGTTTGAAAAACAAAAGCCTCAGCCGG  350

seq1  GCGTGGTGGCGCACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGGTGGCGCACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGC  400

seq1  GGGTTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACA  450

seq1  ACCAGGGCTACACAGAGAAACCCTGTCTCAAAAAACCAAAAAAAAAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGGCTACACAGAGAAACCCTGTCTCAAAAAACCAAAAAAAAAAAAA  500

seq1  AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||| || |
seq2  AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAATGATA  550

seq1  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAAGAAAGA  600
      |||||||||||||||||||||| ||| |||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAGATAGATAGAAAGAAAGAAGGAAAGAAAGA  600

seq1  GAAGAAAAACAAAAGCCTCAACCTTAAAGGTGGTCTTCCTTCCTACCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAAACAAAAGCCTCAACCTTAAAGGTGGTCTTCCTTCCTACCTGT  650

seq1  CTTCCCTCCTC-TTCTTCCCTCCCAAGCATTTTCCCTCTAGAGGCCACC-  698
      ||||||||||| ||||||||||||||||||||||||||||||||||||| 
seq2  CTTCCCTCCTCTTTCTTCCCTCCCAAGCATTTTCCCTCTAGAGGCCACCT  700

seq1  AGGTGGCGCTCGATCCCAGCAGAAGATGCTCTGCTCAAGGCACCCACAGA  748
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGGTGGCGCTCGATCCTAGCAGAAGATGCTCTGCTCAAGGCACCCACAGA  750

seq1  TGTCCACTCAGCTGCTAACCTAGCTGTAGGCCCATCCAAAGGTGGCAGGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCACTCAGCTGCTAACCTAGCTGTAGGCCCATCCAAAGGTGGCAGGA  800

seq1  CATTCCAGACTGAGCTCTGGGTGTCAC-ATGCATGCAGCTGTTCACAACC  847
      ||||||||||||||||||||||||||| |||||||||||||||||| |||
seq2  CATTCCAGACTGAGCTCTGGGTGTCACAATGCATGCAGCTGTTCAC-ACC  849

seq1  CAGCTGAGGGCCTCTGGGCATGTCACTTCCTCAAGGC-TGTGATTCCCCC  896
      ||||||||||||||| |||||||| |||| ||||||| ||||  | ||||
seq2  CAGCTGAGGGCCTCT-GGCATGTC-CTTCTTCAAGGCTTGTGGATTCCCC  897

seq1  CAACCCCCAAAATAGGATCAAAAAATGTATTTCAGACCAAGGTGGT  942
      ||  |||||||||||||||  ||||||||||||||||||  |||||
seq2  CA--CCCCAAAATAGGATC--AAAATGTATTTCAGACCA--GTGGT  937