BAC Information

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BAC

Clone NameB6Ng01-126I01
Chromosome8 (Build37)
Map Location 23,092,262 - 23,092,971
singlet/doubletsinglet
Overlap genenone
Upstream geneDefcr21, LOC100038926, Defcr23, LOC100041688, Defcr25, LOC626605, LOC634825, LOC100040619, LOC100038927, Defcr22, Defcr-rs7, LOC100041759, LOC672740, EG665969, LOC100041787, Defcr3, Defcr5, LOC100041811, Defcr-rs1, LOC100040668, LOC100041843, LOC100040678, EG665927, LOC100040693, Defcr20, LOC100041890, LOC100041895, EG626682, LOC100040706, EG665956, LOC635093, Defcr26, Defcr17, LOC100041952, Defcr-ps1, AY761184, LOC100040729, Defcr24, LOC100040739, Defb1, Defb50, Defb2, Defb10, Defb9, Defb11, Defb15, Defb35, Defb13, C86695, Ccdc70
Downstream geneAtp7b, Alg11, Nek5, Nek3, Ckap2, Vps36, Rpl30-ps2, Thsd1, Tpte, Slc25a15, LOC547006, Mrps31, AI316807, Slc20a2, LOC100040803, Vdac3, Dkk4, Polb, Ikbkb, Plat, Ap3m2, Myst3, LOC100042253
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126I01.bB6Ng01-126I01.g
ACCDH928858DH928859
length1,181710
definitionDH928858|Mus musculus domesticus DNA, BAC clone: B6Ng01-126I01, 5' end.DH928859|Mus musculus domesticus DNA, BAC clone: B6Ng01-126I01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttgttcgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagcccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggttgtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattcttgatcttacagcacatgccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
ttcacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtttctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttggaagtttttatcat
acagatctttcacttccttagttagcattacgccaagatattttatactt
atttgtgactattgagaatggtgttgttccctaatttcttctcagctgtt
attctttgtataagagaaaggccatggacttgttggagttatttatatcc
agctactcatcgaagctgcttatcagttaggagtcccgggttgatcttaa
ggtccctaaatatacaattattcatcgtgcaaaaggaaatttgtgagatt
cccttgccaaatttgataacccccgtggaat
gaattctccccagaaaaacctgagggctaaataataatgaagagaacttg
gattctggctgtgactggggtattgtttggtcagagagacatctggtggc
tcccaagctaaattgcaccagcttgccaaaggacggtagccacctcctct
cctgaactgaaaggttcagctttgccttaggaggagagagctttccacct
gcagagtggattgtgagctctgaggccacagtgacagtgtgggtggcccc
ctccatcccccgctgtctccctggcagctagtttaacggtgctgtcactt
ggttccctggcaataaaaatggaatgtatgtagatagctcctgtgagcat
tgtgagagactagcaagtcacagatagtcctccctggggccactgcatca
tctcggtgttcagtggttgcagccggtcaaggctggagcacaggaagcca
ggagactctgccatatctgtatccggatgcatccacacacaaagacaaag
gatctccctctacaaaaccctgctccggagcttttctccagaagccggga
tggcttgtggagcagctctctgcaccaactttctcaatttctacacttag
aatttttgctgtaacagtgttatggtttgtatatgctcgacccagggagt
ggcactattagaaggtatgaccctgttggagtaggtgtgggcttgttgga
gtaggtatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_23092262_23092971
seq2: B6Ng01-126I01.g_68_777

seq1  GAATTCTCCCCAGAAAAACCTGAGGGCTAAATAATAATGAAGAGAACTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCCAGAAAAACCTGAGGGCTAAATAATAATGAAGAGAACTTG  50

seq1  GATTCTGGCTGTGACTGGGGTATTGTTTGGTCAGAGAGACATCTGGTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGGCTGTGACTGGGGTATTGTTTGGTCAGAGAGACATCTGGTGGC  100

seq1  TCCCAAGCTAAATTGCACCAGCTTGCCAAAGGACGGTAGCCACCTCCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGCTAAATTGCACCAGCTTGCCAAAGGACGGTAGCCACCTCCTCT  150

seq1  CCTGAACTGAAAGGTTCAGCTTTGCCTTAGGAGGAGAGAGCTTTCCACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAACTGAAAGGTTCAGCTTTGCCTTAGGAGGAGAGAGCTTTCCACCT  200

seq1  GCAGAGTGGATTGTGAGCTCTGAGGCCACAGTGACAGTGTGGGTGGCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGTGGATTGTGAGCTCTGAGGCCACAGTGACAGTGTGGGTGGCCCC  250

seq1  CTCCATCCCCCGCTGTCTCCCTGGCAGCTAGTTTAACGGTGCTGTCACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATCCCCCGCTGTCTCCCTGGCAGCTAGTTTAACGGTGCTGTCACTT  300

seq1  GGTTCCCTGGCAATAAAAATGGAATGTATGTAGATAGCTCCTGTGAGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCCTGGCAATAAAAATGGAATGTATGTAGATAGCTCCTGTGAGCAT  350

seq1  TGTGAGAGACTAGCAAGTCACAGATAGTCCTCCCTGGGGCCACTGCATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGAGACTAGCAAGTCACAGATAGTCCTCCCTGGGGCCACTGCATCA  400

seq1  TCTCGGTGTTCAGTGGTTGCAGCCGGTCAAGGCTGGAGCACAGGAAGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGGTGTTCAGTGGTTGCAGCCGGTCAAGGCTGGAGCACAGGAAGCCA  450

seq1  GGAGACTCTGCCATATCTGTATCCGGATGCATCCACACACAAAGACAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACTCTGCCATATCTGTATCCGGATGCATCCACACACAAAGACAAAG  500

seq1  GATCTCCCTCTACAAAACCCTGCTCCGGAGCTTTTCTCCAGAAGCCGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCCCTCTACAAAACCCTGCTCCGGAGCTTTTCTCCAGAAGCCGGGA  550

seq1  TGGCTTGTGGAGCAGCTCTCTGCACCAACTTTCTCAATTTCTACACTTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGTGGAGCAGCTCTCTGCACCAACTTTCTCAATTTCTACACTTAG  600

seq1  AATTTTTGCTGTAACAGTGTTATGGTTTGTATATGCTCGACCCAGGGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTGCTGTAACAGTGTTATGGTTTGTATATGCTCGACCCAGGGAGT  650

seq1  GGCACTATTAGAAGGTATGACCCTGTTGGAGTAGGTGTGGGCTTGTTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTATTAGAAGGTATGACCCTGTTGGAGTAGGTGTGGGCTTGTTGGA  700

seq1  GTAGGTATGT  710
      ||||||||||
seq2  GTAGGTATGT  710