BAC Information

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BAC

Clone NameB6Ng01-126N03
Chromosome8 (Build37)
Map Location 18,649,622 - 18,808,816
singlet/doubletdoublet
Overlap geneMcph1, Angpt2
Upstream geneLOC665638, LOC100040466
Downstream geneAgpat5, LOC100040486, Xkr5, Defb40, Defb37, Defb38, Defb39, Defb12, Defb34, EG546038, Spag11, Defb14, Defb4, EG654452, Defb6, EG574081, Defb5, Defb3, Defb54-ps, LOC100040504, LOC100040514, Defb8, LOC100040528, LOC100041511, Defb7, LOC670326, LOC100040561, LOC624198, EG665730, 4930467E23Rik, LOC100041567
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126N03.bB6Ng01-126N03.g
ACCDH929092DH929093
length1,063488
definitionDH929092|Mus musculus domesticus DNA, BAC clone: B6Ng01-126N03, 5' end.DH929093|Mus musculus domesticus DNA, BAC clone: B6Ng01-126N03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(18,807,748 - 18,808,816)(18,649,622 - 18,650,115)
sequence
gaattctaggaagatgtgtcattaattgggtgacattttaaatattcttc
aggatcattgttggttttctgcgttttctggaaattgatgcttgagatca
tattcagacttaaaccattgtcaagactcttggaagcatgctgtctgctt
ctttgcttttgtcgggatttctgcagtctttgatactggacctctcccag
ccccttgtgggtgattgcaccttggttcttgtacatactaggcgagtgcg
ccaccaagaaacactattgaaggagctggaaaatactacagttatcatga
agcacgagatgcttcaccttacctggtaagagcctctttcagcatgtctg
tgaattttctagctatcacccagtagtctgtgtaaaattagccatgtaga
gaagtcttgctatagttttgtttagaaatactgctttaggactataacct
gggcactgaggaacattcactgtgtggacaaagctaggtattacatgtgt
ttcttgttatatataggtgtaacagtttatacacatatgctgtacatgtg
ccatgagtttggtttataaaacttgtcctcttcatcatattgggacttct
ctcctccacacttgagattctaattctcagatacaggagataatgaagaa
tttccttgactgttgtgtgtgtgtgcgcgcgcgtgtggaatgttaagaaa
aatcacactcgtactgctgccattgtgaacactgaaaatgttttattgct
gtgtacatatctaagtcttcctctatcagagcttctagcccccacccact
ctaccactcctttcagtcctaggcattggttttatctctctgcctatttg
cttatctctatttgtatacctctatttccatacctaaccaccacagcctc
actgactcctcatcttgcttgtttagactttgcctcccagtggactcttc
ctccaagaccatggcataacagtcctgggtctggcattcagttatgagtt
tgcatgtcatattgcttaagagttagctttaatataaaaatttaagtcat
gtgttcttttgaa
tttctttttctctttttttgtttttttgtttttttttttttttggttttt
tgtttgtttgtttgttttcttgagtggttgcacttcctccaataaacttt
ttcttttttttttttttaattaagtaagtgtgtgcttgtgcacacttggg
ttagttcccaatgaggtcaaagggggttgggtatgctggagccagattta
attggcagttgtgaacttcccaaacttgagtcctctggaagagcatcaag
tgctcttcaccactaaggtatatctccagcccattgtattttttttagaa
taagatttacttgctttaatattgtgtatacatagtttacctgtgtgtac
gtatgtgcactatctgtgtatagtacctgcagtgcccttggaagccagaa
gaggttattggatctcctggaactgaagtcatgggtggttggcagccacc
atgtggttgctgagagccaaattttgagtcccctgtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_18807748_18808816
seq2: B6Ng01-126N03.b_51_1113 (reverse)

seq1  TTCAAAAGAACACATGACTTAAAATTTTATATTTAAAAGCTAACTCTTAA  50
      ||||||||||||||||||||||| |||||||||  |||||||||||||||
seq2  TTCAAAAGAACACATGACTTAAATTTTTATATT--AAAGCTAACTCTTAA  48

seq1  GCAAATATGACATGGCAAACTCATAACTGAATGCCAGGACCCAGGACTGT  100
      || |||||||||| |||||||||||||||||||||| |||||||||||||
seq2  GC-AATATGACAT-GCAAACTCATAACTGAATGCCA-GACCCAGGACTGT  95

seq1  TATTGCCATGGTCTTGGAGGAAGAGTCCACTGGGAGGCAAAGTCTAAACA  150
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TA-TGCCATGGTCTTGGAGGAAGAGTCCACTGGGAGGCAAAGTCTAAACA  144

seq1  AGCAAGATGAGGAGTCAGTGAGGCTGTGGTGGTTAGGTATGGAAATAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGATGAGGAGTCAGTGAGGCTGTGGTGGTTAGGTATGGAAATAGAG  194

seq1  GTATACAAATAGAGATAAGCAAATAGGCAGAGAGATAAAACCAATGCCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACAAATAGAGATAAGCAAATAGGCAGAGAGATAAAACCAATGCCTA  244

seq1  GGACTGAAAGGAGTGGTAGAGTGGGTGGGGGCTAGAAGCTCTGATAGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGAAAGGAGTGGTAGAGTGGGTGGGGGCTAGAAGCTCTGATAGAGG  294

seq1  AAGACTTAGATATGTACACAGCAATAAAACATTTTCAGTGTTCACAATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTAGATATGTACACAGCAATAAAACATTTTCAGTGTTCACAATGG  344

seq1  CAGCAGTACGAGTGTGATTTTTCTTAACATTCCACACGCGCGCGCACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTACGAGTGTGATTTTTCTTAACATTCCACACGCGCGCGCACACA  394

seq1  CACACAACAGTCAAGGAAATTCTTCATTATCTCCTGTATCTGAGAATTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAACAGTCAAGGAAATTCTTCATTATCTCCTGTATCTGAGAATTAG  444

seq1  AATCTCAAGTGTGGAGGAGAGAAGTCCCAATATGATGAAGAGGACAAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCAAGTGTGGAGGAGAGAAGTCCCAATATGATGAAGAGGACAAGTT  494

seq1  TTATAAACCAAACTCATGGCACATGTACAGCATATGTGTATAAACTGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAACCAAACTCATGGCACATGTACAGCATATGTGTATAAACTGTTA  544

seq1  CACCTATATATAACAAGAAACACATGTAATACCTAGCTTTGTCCACACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTATATATAACAAGAAACACATGTAATACCTAGCTTTGTCCACACAG  594

seq1  TGAATGTTCCTCAGTGCCCAGGTTATAGTCCTAAAGCAGTATTTCTAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTTCCTCAGTGCCCAGGTTATAGTCCTAAAGCAGTATTTCTAAAC  644

seq1  AAAACTATAGCAAGACTTCTCTACATGGCTAATTTTACACAGACTACTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTATAGCAAGACTTCTCTACATGGCTAATTTTACACAGACTACTGG  694

seq1  GTGATAGCTAGAAAATTCACAGACATGCTGAAAGAGGCTCTTACCAGGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAGCTAGAAAATTCACAGACATGCTGAAAGAGGCTCTTACCAGGTA  744

seq1  AGGTGAAGCATCTCGTGCTTCATGATAACTGTAGTATTTTCCAGCTCCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAAGCATCTCGTGCTTCATGATAACTGTAGTATTTTCCAGCTCCTT  794

seq1  CAATAGTGTTTCTTGGTGGCGCACTCGCCTAGTATGTACAAGAACCAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGTGTTTCTTGGTGGCGCACTCGCCTAGTATGTACAAGAACCAAGG  844

seq1  TGCAATCACCCACAAGGGGCTGGGAGAGGTCCAGTATCAAAGACTGCAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATCACCCACAAGGGGCTGGGAGAGGTCCAGTATCAAAGACTGCAGA  894

seq1  AATCCCGACAAAAGCAAAGAAGCAGACAGCATGCTTCCAAGAGTCTTGAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCGACAAAAGCAAAGAAGCAGACAGCATGCTTCCAAGAGTCTTGAC  944

seq1  AATGGTTTAAGTCTGAATATGATCTCAAGCATCAATTTCCAGAAAACGCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTTTAAGTCTGAATATGATCTCAAGCATCAATTTCCAGAAAACGCA  994

seq1  GAAAACCAACAATGATCCTGAAGAATATTTAAAATGTCACCCAATTAATG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCAACAATGATCCTGAAGAATATTTAAAATGTCACCCAATTAATG  1044

seq1  ACACATCTTCCTAGAATTC  1069
      |||||||||||||||||||
seq2  ACACATCTTCCTAGAATTC  1063

seq1: chr8_18649622_18650115
seq2: B6Ng01-126N03.g_69_562

seq1  GAATTCTTTCTTTTTCTCTTTTTTTGTTTTTTTGTTTTTTTTTTTTTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTTTTCTCTTTTTTTGTTTTTTTGTTTTTTTTTTTTTTTG  50

seq1  GTTTTTTGTTTGTTTGTTTGTTTTCTTGAGTGGTTGCACTTCCTCCAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTGTTTGTTTGTTTGTTTTCTTGAGTGGTTGCACTTCCTCCAATA  100

seq1  AACTTTTTCTTTTTTTTTTTTTTAATTAAGTAAGTGTGTGCTTGTGCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTTCTTTTTTTTTTTTTTAATTAAGTAAGTGTGTGCTTGTGCACA  150

seq1  CTTGGGTTAGTTCCCAATGAGGTCAAAGGGGGTTGGGTATGCTGGAGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGTTAGTTCCCAATGAGGTCAAAGGGGGTTGGGTATGCTGGAGCCA  200

seq1  GATTTAATTGGCAGTTGTGAACTTCCCAAACTTGAGTCCTCTGGAAGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAATTGGCAGTTGTGAACTTCCCAAACTTGAGTCCTCTGGAAGAGC  250

seq1  ATCAAGTGCTCTTCACCACTAAGGTATATCTCCAGCCCATTGTATTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTGCTCTTCACCACTAAGGTATATCTCCAGCCCATTGTATTTTTT  300

seq1  TTAGAATAAGATTTACTTGCTTTAATATTGTGTATACATAGTTTACCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATAAGATTTACTTGCTTTAATATTGTGTATACATAGTTTACCTGT  350

seq1  GTGTACGTATGTGCACTATCTGTGTATAGTACCTGCAGTGCCCTTGGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACGTATGTGCACTATCTGTGTATAGTACCTGCAGTGCCCTTGGAAG  400

seq1  CCAGAAGAGGTTATTGGATCTCCTGGAACTGAAGTCATGGGTGGTTGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGAGGTTATTGGATCTCCTGGAACTGAAGTCATGGGTGGTTGGCA  450

seq1  GCCACCATGTGGTTGCTGAGAGCCAAATTTTGAGTCCCCTGTAA  494
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCATGTGGTTGCTGAGAGCCAAATTTTGAGTCCCCTGTAA  494