BAC Information

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BAC

Clone NameB6Ng01-128B02
Chromosome8 (Build37)
Map Location 102,550,422 - 102,551,587
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh8, A330008L17Rik, LOC667531
Downstream geneLOC100042069, LOC436054, LOC100042078, LOC100042086, LOC100042092, LOC384895
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128B02.bB6Ng01-128B02.g
ACCDH930017DH930018
length1,1711,188
definitionDH930017|Mus musculus domesticus DNA, BAC clone: B6Ng01-128B02, 5' end.DH930018|Mus musculus domesticus DNA, BAC clone: B6Ng01-128B02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactgcctcttagctcttaaggatttgctagtaggctgattagca
tggattttttctgcttcacagtagtgcttaatccagcagacactctgatc
tatttttgaggaatccaaaggctttatttccctcccaaacaccatctacc
tttattttgctatattcactgtattgtttgtatacagcatggaaagctga
cttgctcactgttagtcctttttcactctattcactttaagcccatgata
acttggaattgacgtccctagaagggcctttataacccactccaaaagcc
aaacttgtgaagagagataagagaataacaaaacaaggaagaaagaagga
caaaatgaatgaaaggagggaaatggaaatgaaaataagcgatgacttca
caattaaattttatctctaattatttaatagcttctcgccattcttaaaa
atgaagggaaatcttggcttcattgtgttccactttgatctctcctttgc
tttggattcagagattttctttaccaaaataacagctcctaccctatgat
aaatgaacatgcagtgttccatattaaatattattttgttgcttagataa
aacttacctttcaatataagaaatagtggtgcttcttttcttttcatttc
catttgtgtccacatgtgatgtgcttgtagataccaagatcaatgcagga
aatatttctcaattccccataaacattattttggagtcaggttctttttt
attttactttttaaaccattttatatttttattaaacaaataaaattatt
ttaaattatacaactcagtattgacattttaagttatcaaaataaatata
taatagataaatacctcttaaatatacatgatatcttctgaagctaaaag
taatatgcagtcaacaagtttttaaaatctattgggaacattaaacatga
tagaagtagaaaaaatgtcatacgaagtctttttatgaaaggaaattacg
acaagttcctctttagaaagaaaccgttccatctccatgggagaatgtgc
agtgttacggttggcttcatagaatgaattggtggtgtttcttctgtttc
ctatttttgtggaatacttgaagagatattggttactagggcttctttgg
aagtctgataggaattctgca
gaattctttgtatatttcgggtattagccctctatgtcatatagggttgg
taaagatcttttctcaatctatttattgtccctttgtcctgttgacagag
tcctttgccatacagaatcttttcagttttatgaggtcctatttgccaat
ttttgatcttagagcctgagccattggtgttgtgttcaggaaatttcccc
ctgtgccaatatgtccaaggctcttccccactttctcctctatacctttc
aatgtatctggttttatgtggaggtccttgatccacttgcacttgagctt
tgtacaaggagataagaatggatcaatttccattcttctacatgctgtac
accaggtgaaccacctccatttgttcaaaatgctgtctcttttccactgg
attgtcttggtttcagcttttttcttttttttctttttgtcaaagatcaa
gtgaacataggtgtgtgggtttacttctgggacttcaattctgttccatt
tatttacttgcctgtcactgtaccaatgccatgcagatttttatcactat
tgctttgttgtacagctttacgacagggaactaaacatagaattcataaa
aaatgggcagaaaaacatttataaaatgttcaaaatccttagctatcaag
gaaataaaaaatttaaatcaatttaaaatctcatctttaacacagtcaga
atggcaaaaatcaaatctacaaatgataaagtactaatgtggctgtataa
gaacagttatccactgcagatgggtgtacacacactgaagtatccactat
ggacttcactgtcacagtacaccaaaaagctagaaaaactatgagttcca
gctatataatactttgaggactttgtgttcctaatggagaggcacttcct
tatccgtgtcactgcttctctagtcatatgttaggatatggaaatagcct
tcaatcccattaattgctgagaaatgtggtgtattagagaagtattattt
tatcagcttgttaaaaacaaaatacatattaaccttccctttcagaagag
gagttcccatagtactaccttcccacgctggccctgggagaaagtttagg
atgtgggagagccaccgtatataaatgtgattaattttacttttggacat
ctcttatttaccagtcccggaccagatggtaagattta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_102550422_102551587
seq2: B6Ng01-128B02.b_47_1217 (reverse)

seq1  TGCAGAATT-CTATCAGACTTTCAAAGAAGACCTAGT-ACCAATA-CTCT  47
      ||||||||| ||||||||||| |||||||| |||||| ||||||| ||||
seq2  TGCAGAATTCCTATCAGACTTCCAAAGAAGCCCTAGTAACCAATATCTCT  50

seq1  TCAAATTATTCCAC-AAAATA-GAAACAGAAGGAACACTACCCAATTCAT  95
      || || |||||||| |||||| |||||||||| ||||| | |||||||||
seq2  TC-AAGTATTCCACAAAAATAGGAAACAGAAGAAACACCA-CCAATTCAT  98

seq1  TCTATGAAGCC-ACCGTTACACTGCACATTCTCCCATGGAGATGGAACGG  144
      ||||||||||| ||||| ||||||||||||||||||||||||||||||||
seq2  TCTATGAAGCCAACCGTAACACTGCACATTCTCCCATGGAGATGGAACGG  148

seq1  TTTCTTTCTAAAGAGGAACTTGTCGTAATTTCCTTTCAT-AGAAGACTTC  193
      ||||||||||||||||||||||||||||||||||||||| | ||||||||
seq2  TTTCTTTCTAAAGAGGAACTTGTCGTAATTTCCTTTCATAAAAAGACTTC  198

seq1  GTATGACATTTTTTTCTACTTCTATCATGTTTAATGTTCCCAATAGATTT  243
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GTATGACA-TTTTTTCTACTTCTATCATGTTTAATGTTCCCAATAGATTT  247

seq1  TAAAAACTTGTTGACTGCATATTACTTTTAGCTTCAGAAGATATCATGTA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACTTGTTGACTGCATATTACTTTTAGCTTCAGAAGATATCATGTA  297

seq1  TATTTAAGAGGTATTTATCTATTATATA-TTATTTTGATAACTTAAAATG  342
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TATTTAAGAGGTATTTATCTATTATATATTTATTTTGATAACTTAAAATG  347

seq1  TCAATACTGAGTTGTATAATTTAAAATAATTTTATTTGTTTAATAAAAAT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATACTGAGTTGTATAATTTAAAATAATTTTATTTGTTTAATAAAAAT  397

seq1  ATAAAATGGTTTAAAAAGTAAAATAAAAAAGAACCTGACTCCAAAATAAT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATGGTTTAAAAAGTAAAATAAAAAAGAACCTGACTCCAAAATAAT  447

seq1  GTTTATGGGGAATTGAGAAATATTTCCTGCATTGATCTTGGTATCTACAA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATGGGGAATTGAGAAATATTTCCTGCATTGATCTTGGTATCTACAA  497

seq1  GCACATCACATGTGGACACAAATGGAAATGAAAAGAAAAGAAGCACCACT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATCACATGTGGACACAAATGGAAATGAAAAGAAAAGAAGCACCACT  547

seq1  ATTTCTTATATTGAAAGGTAAGTTTTATCTAAGCAACAAAATAATATTTA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTATATTGAAAGGTAAGTTTTATCTAAGCAACAAAATAATATTTA  597

seq1  ATATGGAACACTGCATGTTCATTTATCATAGGGTAGGAGCTGTTATTTTG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGAACACTGCATGTTCATTTATCATAGGGTAGGAGCTGTTATTTTG  647

seq1  GTAAAGAAAATCTCTGAATCCAAAGCAAAGGAGAGATCAAAGTGGAACAC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGAAAATCTCTGAATCCAAAGCAAAGGAGAGATCAAAGTGGAACAC  697

seq1  AATGAAGCCAAGATTTCCCTTCATTTTTAAGAATGGCGAGAAGCTATTAA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGCCAAGATTTCCCTTCATTTTTAAGAATGGCGAGAAGCTATTAA  747

seq1  ATAATTAGAGATAAAATTTAATTGTGAAGTCATCGCTTATTTTCATTTCC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTAGAGATAAAATTTAATTGTGAAGTCATCGCTTATTTTCATTTCC  797

seq1  ATTTCCCTCCTTTCATTCATTTTGTCCTTCTTTCTTCCTTGTTTTGTTAT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCTCCTTTCATTCATTTTGTCCTTCTTTCTTCCTTGTTTTGTTAT  847

seq1  TCTCTTATCTCTCTTCACAAGTTTGGCTTTTGGAGTGGGTTATAAAGGCC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTATCTCTCTTCACAAGTTTGGCTTTTGGAGTGGGTTATAAAGGCC  897

seq1  CTTCTAGGGACGTCAATTCCAAGTTATCATGGGCTTAAAGTGAATAGAGT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAGGGACGTCAATTCCAAGTTATCATGGGCTTAAAGTGAATAGAGT  947

seq1  GAAAAAGGACTAACAGTGAGCAAGTCAGCTTTCCATGCTGTATACAAACA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGGACTAACAGTGAGCAAGTCAGCTTTCCATGCTGTATACAAACA  997

seq1  ATACAGTGAATATAGCAAAATAAAGGTAGATGGTGTTTGGGAGGGAAATA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTGAATATAGCAAAATAAAGGTAGATGGTGTTTGGGAGGGAAATA  1047

seq1  AAGCCTTTGGATTCCTCAAAAATAGATCAGAGTGTCTGCTGGATTAAGCA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTTGGATTCCTCAAAAATAGATCAGAGTGTCTGCTGGATTAAGCA  1097

seq1  CTACTGTGAAGCAGAAAAAATCCATGCTAATCAGCCTACTAGCAAATCCT  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTGAAGCAGAAAAAATCCATGCTAATCAGCCTACTAGCAAATCCT  1147

seq1  TAAGAGCTAAGAGGCAGTGAATTC  1166
      ||||||||||||||||||||||||
seq2  TAAGAGCTAAGAGGCAGTGAATTC  1171