BAC Information

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BAC

Clone NameB6Ng01-128C14
Chromosome8 (Build37)
Map Location 12,751,414 - 12,859,988
singlet/doubletdoublet
Overlap geneAtp11a
Upstream geneArhgef7, 1700018L24Rik, LOC100040155, LOC100040175, EG434280, EG434279, Sox1, 1700094C09Rik, Tubgcp3
Downstream geneLOC100040229, Mcf2l, F7, F10, Proz, Pcid2, Cul4a, Lamp1, Grtp1, Adprhl1, Dcun1d2, Tmco3, Tfdp1, Atp4b, Grk1, Gm687, Gas6, LOC434282, 1700029H14Rik, Rasa3, 4932443I19Rik, LOC665516, Cdc16, Upf3a, AF366264
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128C14.bB6Ng01-128C14.g
ACCDH930087DH930088
length1,1561,157
definitionDH930087|Mus musculus domesticus DNA, BAC clone: B6Ng01-128C14, 5' end.DH930088|Mus musculus domesticus DNA, BAC clone: B6Ng01-128C14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,858,823 - 12,859,988)(12,751,414 - 12,752,594)
sequence
gaattcatcttgctggccagtttgggagtgggaaacagagttcccccata
cccaccacttactcttgtaaaggtaaatttgagccaaattcagcaccctt
aaaagtggcataacttaaatctttttccccatccagagttagggaatgaa
cccagggtcttgcatatgcaagtgggtacctagatcatggggcaccagat
cagaccacagctcaatatcaaaggaacaattactttttttgtgagttaca
gaaaataacttattttttctatttatctttgttctcttcttatttcagat
gattgttttgatctaaagaacaaattaaacattgttcatcttgaatttta
ccaacagaacacttaaaacgtgtgtccctgcagatctgaagactaaaggg
cgggctgctcagttctatgatgcccagaccttttgagatatctcttagta
acttcccagtcctaagactgacaggggaaagtgctggcctggccaggcag
gctccttacctgagttctctccgttgccgtgggccacagctgcctacaca
ggaccttcttgaggacgtcagggaggaggccgaccgtgacaagcagtatg
atacccagccaggcaggcccactggacagcatggatatgaacacatagta
catcctctggtaactgaggaacggcctgtgcacagggaggacactggtga
gaccctgcctggcaggaacaatgccacagccctcccctaaggtgccattc
ttggtgctgccagggcttgaccaagccacccgcatgctgtgagtctgcct
cttgtagtcttctgagagagaaagggaagaagcaactatagcctgttgtc
caaagcggcatgaggattctggagactcagtgtctgcctgatctcacaca
gcagcagtatacccctgggtgtggtggggcactggcctgcagcccaagtg
ctttgaacacatgcctccagaggaggcggaggaacagggcatttcctgta
tgctgacatagcttccttggctcatgctccctgtttccctctcagacctg
ggaatacctctacttcctggcaccacggacagccaaggatggaggaaagc
cctccctccaggacacacagcttgcatacagcacatgctctactggatga
gtgtgg
gaattctaggcatggactgccatagcccgcacgttctgagcacatttagg
tcatttccagttaaaactgatcaaatattcttacaaattacaataaatgg
aagatattttaaggaaaaacattttgtcttcctatttataagagtaatgg
ggcaagagagaccattttccttattttctggaaagtacccataaatagaa
catcctttaaagccatgttatctaatatccaagaggtttgctcaagcaaa
acacaaatttccctgaataatgacaaatggctagtgaccgtccaactcct
atttcagattgcctgccatttatttagtttgtcagacaagtaataagttt
atattaaacttattgttcaaaaataggtacaacaaattgcctttgtttac
tttattagaaattttacacaccacagaacttggttttctttttcttttta
agaaaactgggattaaaatcattggtcctttagaagctaagatgggggag
tatagaaaaattaaagaatttctggcatactattacatagtctctgaaaa
ataagaggaaaataagatgttgagaggcaaactaaacccccaaagtctca
cttggggggcaggcagctacttgggtaaacagagcctctggaggcaccag
ggaccctctgatccttgaagaagcaaagacccatggtacaggggaggcaa
aacctcagaggcccaccaaagagaattcctggatggggctgttatgtgca
gggatcagctgatgagaagatagggaaaagtttggatgttggagacccta
gagcagttcttgagctagctttagtcctctgagtagccttttcttggcca
cctcagtgtcagaagtaacatcctgtgattaataaacatctttcagaatt
ttattgacttagcagaccaccagctttcacaactccaaagctaacataac
atcagatggaatctgatgtatagagaaggtctatagaaaactctccatct
tgctgtaacttctttctattgtacccaccaatgtgtttttaacttgctga
ttgtgactttgttttggaactataaagctcatgttcaggtatgggtgtac
actttgtggtgattgagacaggttcctggttagcctgctgtctgaactca
ctctgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_12858823_12859988
seq2: B6Ng01-128C14.b_49_1204 (reverse)

seq1  CCACACTCACTCCGATGAGCACTGTGCCTGTATGCAGGCTGTGTGTCCTT  50
      |||||||||  | |  ||||| |||| ||||||||| ||||||||||| |
seq2  CCACACTCATCCAGTAGAGCA-TGTG-CTGTATGCAAGCTGTGTGTCC-T  47

seq1  GGAGGGAGGGCTTTCCTCCATCCCTGGGCTGTCCGTGGTGCCAGGAAGTA  100
      ||||||||||||||||||||| ||| ||||||||||||||||||||||||
seq2  GGAGGGAGGGCTTTCCTCCAT-CCTTGGCTGTCCGTGGTGCCAGGAAGTA  96

seq1  GAAGGTAATTCCCAGGTCTGAGAGGGAAACAGGGAGCATGGAGCCAAGGA  150
      | |||| |||||||||||||||||||||||||||||||| ||||||||||
seq2  G-AGGT-ATTCCCAGGTCTGAGAGGGAAACAGGGAGCAT-GAGCCAAGGA  143

seq1  AGCTATGTCAGCATACAGGAAATGCCCTGTTCCTCCGCCTCCTCTGGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATGTCAGCATACAGGAAATGCCCTGTTCCTCCGCCTCCTCTGGAGG  193

seq1  CATGTGTTCAAAGCACTTGGGCCTGCAGGCCAGTGCCCCACCAACACCCA  250
      ||||||||||||||||||||| |||||||||||||||||||| |||||||
seq2  CATGTGTTCAAAGCACTTGGG-CTGCAGGCCAGTGCCCCACC-ACACCCA  241

seq1  GGGGTATACTGCTGCTGTGTGAAGATCAGGCAGACACTGAGTCTCCAGAA  300
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGGGTATACTGCTGCTGTGTG-AGATCAGGCAGACACTGAGTCTCCAGAA  290

seq1  TCCTCATGCCGCTTTGGACAACAGGCTATAGTTGCTTCTTCCCTTTCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATGCCGCTTTGGACAACAGGCTATAGTTGCTTCTTCCCTTTCTCT  340

seq1  CTCAGAAGACTACAAGAGGCAGACTCACAGCATGCGGGTGGCTTGGTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAGACTACAAGAGGCAGACTCACAGCATGCGGGTGGCTTGGTCAA  390

seq1  GCCCTGGCAGCACCAAGAATGGCACCTTAGGGGAGGGCTGTGGCATTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGCAGCACCAAGAATGGCACCTTAGGGGAGGGCTGTGGCATTGTT  440

seq1  CCTGCCAGGCAGGGTCTCACCAGTGTCCTCCCTGTGCACAGGCCGTTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCAGGCAGGGTCTCACCAGTGTCCTCCCTGTGCACAGGCCGTTCCT  490

seq1  CAGTTACCAGAGGATGTACTATGTGTTCATATCCATGCTGTCCAGTGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTACCAGAGGATGTACTATGTGTTCATATCCATGCTGTCCAGTGGGC  540

seq1  CTGCCTGGCTGGGTATCATACTGCTTGTCACGGTCGGCCTCCTCCCTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGGCTGGGTATCATACTGCTTGTCACGGTCGGCCTCCTCCCTGAC  590

seq1  GTCCTCAAGAAGGTCCTGTGTAGGCAGCTGTGGCCCACGGCAACGGAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCAAGAAGGTCCTGTGTAGGCAGCTGTGGCCCACGGCAACGGAGAG  640

seq1  AACTCAGGTAAGGAGCCTGCCTGGCCAGGCCAGCACTTTCCCCTGTCAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGGTAAGGAGCCTGCCTGGCCAGGCCAGCACTTTCCCCTGTCAGT  690

seq1  CTTAGGACTGGGAAGTTACTAAGAGATATCTCAAAAGGTCTGGGCATCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGACTGGGAAGTTACTAAGAGATATCTCAAAAGGTCTGGGCATCAT  740

seq1  AGAACTGAGCAGCCCGCCCTTTAGTCTTCAGATCTGCAGGGACACACGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGAGCAGCCCGCCCTTTAGTCTTCAGATCTGCAGGGACACACGTT  790

seq1  TTAAGTGTTCTGTTGGTAAAATTCAAGATGAACAATGTTTAATTTGTTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGTTCTGTTGGTAAAATTCAAGATGAACAATGTTTAATTTGTTCT  840

seq1  TTAGATCAAAACAATCATCTGAAATAAGAAGAGAACAAAGATAAATAGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATCAAAACAATCATCTGAAATAAGAAGAGAACAAAGATAAATAGAA  890

seq1  AAAATAAGTTATTTTCTGTAACTCACAAAAAAAGTAATTGTTCCTTTGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAGTTATTTTCTGTAACTCACAAAAAAAGTAATTGTTCCTTTGAT  940

seq1  ATTGAGCTGTGGTCTGATCTGGTGCCCCATGATCTAGGTACCCACTTGCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGCTGTGGTCTGATCTGGTGCCCCATGATCTAGGTACCCACTTGCA  990

seq1  TATGCAAGACCCTGGGTTCATTCCCTAACTCTGGATGGGGAAAAAGATTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAAGACCCTGGGTTCATTCCCTAACTCTGGATGGGGAAAAAGATTT  1040

seq1  AAGTTATGCCACTTTTAAGGGTGCTGAATTTGGCTCAAATTTACCTTTAC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATGCCACTTTTAAGGGTGCTGAATTTGGCTCAAATTTACCTTTAC  1090

seq1  AAGAGTAAGTGGTGGGTATGGGGGAACTCTGTTTCCCACTCCCAAACTGG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTAAGTGGTGGGTATGGGGGAACTCTGTTTCCCACTCCCAAACTGG  1140

seq1  CCAGCAAGATGAATTC  1166
      ||||||||||||||||
seq2  CCAGCAAGATGAATTC  1156

seq1: chr8_12751414_12752594
seq2: B6Ng01-128C14.g_68_1224

seq1  GAATTCTAGGCATGGACTGCCATAGCCCGCACGTTCTGAGCACATTTAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGCATGGACTGCCATAGCCCGCACGTTCTGAGCACATTTAGG  50

seq1  TCATTTCCAGTTAAAACTGATCAAATATTCTTACAAATTACAATAAATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCCAGTTAAAACTGATCAAATATTCTTACAAATTACAATAAATGG  100

seq1  AAGATATTTTAAGGAAAAACATTTTGTCTTCCTATTTATAAGAGTAATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTTTAAGGAAAAACATTTTGTCTTCCTATTTATAAGAGTAATGG  150

seq1  GGCAAGAGAGACCATTTTCCTTATTTTCTGGAAAGTACCCATAAATAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGAGAGACCATTTTCCTTATTTTCTGGAAAGTACCCATAAATAGAA  200

seq1  CATCCTTTAAAGCCATGTTATCTAATATCCAAGAGGTTTGCTCAAGCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTTAAAGCCATGTTATCTAATATCCAAGAGGTTTGCTCAAGCAAA  250

seq1  ACACAAATTTCCCTGAATAATGACAAATGGCTAGTGACCGTCCAACTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAATTTCCCTGAATAATGACAAATGGCTAGTGACCGTCCAACTCCT  300

seq1  ATTTCAGATTGCCTGCCATTTATTTAGTTTGTCAGACAAGTAATAAGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGATTGCCTGCCATTTATTTAGTTTGTCAGACAAGTAATAAGTTT  350

seq1  ATATTAAACTTATTGTTCAAAAATAGGTACAACAAATTGCCTTTGTTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAACTTATTGTTCAAAAATAGGTACAACAAATTGCCTTTGTTTAC  400

seq1  TTTATTAGAAATTTTACACACCACAGAACTTGGTTTTCTTTTTCTTTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAGAAATTTTACACACCACAGAACTTGGTTTTCTTTTTCTTTTTA  450

seq1  AGAAAACTGGGATTAAAATCATTGGTCCTTTAGAAGCTAAGATGGGGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACTGGGATTAAAATCATTGGTCCTTTAGAAGCTAAGATGGGGGAG  500

seq1  TATAGAAAAATTAAAGAATTTCTGGCATACTATTACATAGTCTCTGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAAAAATTAAAGAATTTCTGGCATACTATTACATAGTCTCTGAAAA  550

seq1  ATAAGAGGAAAATAAGATGTTGAGAGGCAAACTAAACCCCCAAAGTCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAGGAAAATAAGATGTTGAGAGGCAAACTAAACCCCCAAAGTCTCA  600

seq1  CTTGGGGGGCAGGCAGCTACTTGGGTAAACAGAGCCTCTGGAGGCACCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGGGGCAGGCAGCTACTTGGGTAAACAGAGCCTCTGGAGGCACCAG  650

seq1  GGACCCTCTGATCCTTGAAGAAGCAAAGACCCATGGTACAGGGGAGGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCTCTGATCCTTGAAGAAGCAAAGACCCATGGTACAGGGGAGGCAA  700

seq1  AACCTCAGAGGCCCACCAAAGAGAATTCCTGGATGGGGCTGTTATGTGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCAGAGGCCCACCAAAGAGAATTCCTGGATGGGGCTGTTATGTGCA  750

seq1  GGGATCAGCTGATGAGAAGATAGGGAAAAGTTTGGATGTTGGAGACCCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCAGCTGATGAGAAGATAGGGAAAAGTTTGGATGTTGGAGACCCTA  800

seq1  GAGCAGTTCTTGAGCTAGCTTTAGTCCTCTGAGTAGCCTTTTCTTGGCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTTCTTGAGCTAGCTTTAGTCCTCTGAGTAGCCTTTTCTTGGCCA  850

seq1  CCTCAGTGTCAGAAGTAACATCCTGTGATTAATAAACATCTTTCAGAA-T  899
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CCTCAGTGTCAGAAGTAACATCCTGTGATTAATAAACATCTTTCAGAATT  900

seq1  CTATTGACTTAGCAGACCACCAGCTTTCACCAACCCCAAAGCTAACATAA  949
       |||||||||||||||||||||||||||| |||| |||||||||||||||
seq2  TTATTGACTTAGCAGACCACCAGCTTTCA-CAACTCCAAAGCTAACATAA  949

seq1  CATCAGATGGAATCTGATGTTATAGAGAAGGTCTATAGAAAAACTCTCCC  999
      ||||||||||||||||||| |||||||||||||||||| |||||||| ||
seq2  CATCAGATGGAATCTGATG-TATAGAGAAGGTCTATAG-AAAACTCT-CC  996

seq1  ATCTTGCTGTAACCTTCTTTCTATTGTACCCACCAATGTGTTTTAAACTT  1049
      |||||||||||| ||||||||||||||||||||||||||||||| |||||
seq2  ATCTTGCTGTAA-CTTCTTTCTATTGTACCCACCAATGTGTTTTTAACTT  1045

seq1  GCCTGGATTTGTGACTTTGTTTTGTAAAACTATAAAGCTTCATGTCCAGG  1099
      | |||   ||||||||||||||||   ||||||||||| |||||| ||||
seq2  G-CTG--ATTGTGACTTTGTTTTG--GAACTATAAAGC-TCATGTTCAGG  1089

seq1  TAT-GGTGTACACTTTTTTGTTTGTTTGTTTTTGAGACAGGGTTTCTCTG  1148
      ||| ||||||||||||         | ||  ||||||||||  ||| |||
seq2  TATGGGTGTACACTTT--------GTGGTGATTGAGACAGG--TTC-CTG  1128

seq1  TGTAGCCCTGGCTGTCCTGGAACTCACTCTGTA  1181
        |||||   ||||||   ||||||||||||||
seq2  GTTAGCC--TGCTGTC--TGAACTCACTCTGTA  1157