BAC Information

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BAC

Clone NameB6Ng01-128H24
Chromosome8 (Build37)
Map Location 49,792,251 - 49,833,093
singlet/doubletdoublet
Overlap genenone
Upstream geneCdkn2aip, LOC100039801, Cldn22, Wwc2, LOC100040113, Dctd, Odz3
Downstream gene2900073C17Rik, LOC100039866, 4930555F03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128H24.bB6Ng01-128H24.g
ACCDH930335DH930336
length672204
definitionDH930335|Mus musculus domesticus DNA, BAC clone: B6Ng01-128H24, 5' end.DH930336|Mus musculus domesticus DNA, BAC clone: B6Ng01-128H24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(49,832,422 - 49,833,093)(49,792,251 - 49,792,454)
sequence
gaattccttccttgaccactgttctagaaagagtagtttatgttccctta
ccgtgtatgcactgagctcattctattgctagattacatcctcttctaca
tctccactgagaaggcactcagtggtccccagtgacagtgaccactgtag
atgttctcttcgttgtctaatttttcttcctcctctcctctttctcctcc
ttttcctcctcctcttcctcttcctccttctgctcctcttcctcatgcac
ttatatttgggtggtagttatcaaatacaaaaagagaggttgaaaagatg
gagagggaagtaattgatatgatcggtaggtttttgactggcatgaggtg
gtagtgatatccacttggactagagagagtctggggagattgtggggaga
atatgctgtgttttctttgggatgggtgtcaagtaggtttggagtttggc
aaagcctaaaagaaggataaataaatggctgatagcttggaaggcaaaaa
gtaggtgagagcttgcagagtagatgaatagaggagagtatcaagtttag
agggacaggagggttgtcctggactaggcacatctgtaaaaagaaaaaag
atcataaggaaggagagagagatggagagagaatcctggtagcatcaaga
cttgagtgccatggaggacaga
acttgcagtgatagcctccagctaggcttaagaaataggggattaaatgg
ttaccttacagtgtaagctgcaacaagacactgctatgaagcactgaggt
gcacgacacatgccagcactcaaaaaaggtaacctctgtgcatacatgcc
tatgtgcgtgtgcgtgtgcacgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_49832422_49833093
seq2: B6Ng01-128H24.b_49_720 (reverse)

seq1  TCTGTCCTCCATGGCACTCATGTCTTGATGCTACCAGGTTTCTCTCTCCA  50
      |||||||||||||||||||| ||||||||||||||||| |||||||||||
seq2  TCTGTCCTCCATGGCACTCAAGTCTTGATGCTACCAGGATTCTCTCTCCA  50

seq1  TCTCTCTCTCCTTCCTTATGCTCTTTCTTCTTTTTTCAGATGTGCCTAGT  100
      |||||||||||||||||||| ||||| |||||||| ||||||||||||||
seq2  TCTCTCTCTCCTTCCTTATGATCTTTTTTCTTTTTACAGATGTGCCTAGT  100

seq1  CCTGGACAACCCTCCTGTCCCTCTAGACTTGATACTCTCCTCTATTCATC  150
      || |||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCAGGACAACCCTCCTGTCCCTCTAAACTTGATACTCTCCTCTATTCATC  150

seq1  TACTCTGCAAGCTCTCACCTACTTTTTGCCTTCCAAGCTATCAGCCATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGCAAGCTCTCACCTACTTTTTGCCTTCCAAGCTATCAGCCATTT  200

seq1  ATTTATCCTTCTTTTAGGCTTTGCCAAACTCCAAACCTACTTGACACCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCCTTCTTTTAGGCTTTGCCAAACTCCAAACCTACTTGACACCCA  250

seq1  TCCCAAAGAAAACACAGCATATTCTCCCCACAATCTCCCCAGACTCTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAAGAAAACACAGCATATTCTCCCCACAATCTCCCCAGACTCTCTC  300

seq1  TAGTCCAAGTGGATATCACTACCACCTCATGCCAGTCAAAAACCTACCGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCAAGTGGATATCACTACCACCTCATGCCAGTCAAAAACCTACCGA  350

seq1  TCATATCAATTACTTCCCTCTCCATCTTTTCAACCTCTCTTTTTGTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATCAATTACTTCCCTCTCCATCTTTTCAACCTCTCTTTTTGTATTT  400

seq1  GATAACTACCACCCAAATATAAGTGCATGAGGAAGAGGAGCAGAAGGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACTACCACCCAAATATAAGTGCATGAGGAAGAGGAGCAGAAGGAGG  450

seq1  AAGAGGAAGAGGAGGAGGAAAAGGAGGAGAAAGAGGAGAGGAGGAAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAAGAGGAGGAGGAAAAGGAGGAGAAAGAGGAGAGGAGGAAGAAA  500

seq1  AATTAGACAACGAAGAGAACATCTACAGTGGTCACTGTCACTGGGGACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGACAACGAAGAGAACATCTACAGTGGTCACTGTCACTGGGGACCA  550

seq1  CTGAGTGCCTTCTCAGTGGAGATGTAGAAGAGGATGTAATCTAGCAATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTGCCTTCTCAGTGGAGATGTAGAAGAGGATGTAATCTAGCAATAG  600

seq1  AATGAGCTCAGTGCATACACGGTAAGGGAACATAAACTACTCTTTCTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGCTCAGTGCATACACGGTAAGGGAACATAAACTACTCTTTCTAGA  650

seq1  ACAGTGGTCAAGGAAGGAATTC  672
      ||||||||||||||||||||||
seq2  ACAGTGGTCAAGGAAGGAATTC  672

seq1: chr8_49792251_49792454
seq2: B6Ng01-128H24.g_72_275

seq1  ACTTGCAGTGATAGCCTCCAGCTAGGCTTAAGAAATAGGGGATTAAATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCAGTGATAGCCTCCAGCTAGGCTTAAGAAATAGGGGATTAAATGG  50

seq1  TTACCTTACAGTGTAAGCTGCAACAAGACACTGCTATGAAGCACTGAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTTACAGTGTAAGCTGCAACAAGACACTGCTATGAAGCACTGAGGT  100

seq1  GCACGACACATGCCAGCACTCAAAAAAGGTAACCTCTGTGCATACATGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGACACATGCCAGCACTCAAAAAAGGTAACCTCTGTGCATACATGCC  150

seq1  TATGTGCGTGTGCGTGTGCACGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGCGTGTGCGTGTGCACGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  200

seq1  TGTG  204
      ||||
seq2  TGTG  204