BAC Information

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BAC

Clone NameB6Ng01-128L12
Chromosome8 (Build37)
Map Location 111,530,437 - 111,614,873
singlet/doubletdoublet
Overlap genenone
Upstream geneAtbf1
Downstream gene4922502B01Rik, Gm1943, LOC100042829, Pmfbp1, Dhx38, Txnl4b, Hp, Dhodh, Pkd1l3, 2400003C14Rik, 4930566A11Rik, D8Ertd587e, LOC668089, LOC672735, Ap1g1, Phlppl, Marveld3, LOC100041884, Tat, Chst4, Zfp612
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128L12.bB6Ng01-128L12.g
ACCDH930494DH930495
length1,165974
definitionDH930494|Mus musculus domesticus DNA, BAC clone: B6Ng01-128L12, 5' end.DH930495|Mus musculus domesticus DNA, BAC clone: B6Ng01-128L12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,613,688 - 111,614,873)(111,530,437 - 111,531,424)
sequence
gaattctatcttttaaaaacaacatgcgcatgagcacacacacacacaca
cacacacacacacacacacacacacacacacaaatcattactttgcaaaa
taaaaaaggactagcttagttttcatatttctttttacaaatcttttctg
tttagaacacatacagcaacggcttaaaatggtaccacgctactgcaggc
taccatgccccatttggtagggaaatagcctgtttggccctgtgacttct
caaggtaaataggaggtttgtgcttaagttataatgtggaatacttcaga
gtaacctcatgccaaaacggcatatttctgagggatgcaaaggtattcaa
taaaaagcttttaaaggcatatttttaaacttgcagcaggaaagcttttc
tgtgtcaagacagtaattcttttaacagcattgatcaaaatgtcattctt
ttatgagtgtacaataccttttaatggcatacaacaagccattagggtta
tacacctctgtagagcagacagcttactggaaaaaagggaacatgggcca
agatacagtcagtaggcttatgcttcttacaaggttccccccaccaccac
cctacacagaggccagctgcattctgaggtctgcaactgaagtcatccaa
aaattcagtgctggctatccgcacttccgtgacttataagcacttccaca
gaaacatcggctcgaaggtctaaatggcattcctgtagacgcatagggca
gccttgaaacagcctattacctgaggccagaaagaatttattcatgaaga
ttaggaaacaatgagggttttatttactttctgggaaagaagaagaagaa
gaagaaaaaaagattttaaaagaatgtcacgagatgatcactcttcatgt
ttattacaaaccaaactccaaggaagaacattaaagatagatagtgttct
gacacagaatgtatctgtcactcaggctgattaaagattgtcataaaatg
cagctatttaaagtcttctaaaacaaatccttctctgtcaacaatcatat
ttttaaagtaattctgaaataattagaaaagagaatcacagtatacaacg
taaatatcagctgctagagtctatgtacttgaagaatgccaattctggga
ggaatcagctgaggg
cttagccacagtggagtagagagaaatgtttttagacaagaaaagagctt
catgtttgacatgtgtaacacagtaagtgcatgtggaatctgagggacgc
tgaggtgccagggtggacgttaggttcaagctgtcactagttcaagtggt
ggtgctgtctttccactgcaatggtgctactaagagatacctttgaagat
attttaattcctaaactacttcatgctaatatatcccaaaaggaagtgtt
tgagcgtaatgatttgtcacttgttttgagtaaagggaattcctcctctg
cgtttcaaaagaaaagtctgggctgcacttgtttctccgcaccgctgcgc
agagaagtagtttagaagtctatgcttcgtagatgtctgtgccaaaccac
catctaatactgatgagtttatagggagcacctgctattacgagaccagg
aactagaacctggcatcggaggatcgtggtagaagcaaggtgcacgccag
caggtcatatttacagttacaatatttggggctaccgcagccagaaaatc
acggggcaagaaaggaagggcagtgctgcctttttcctttgtctggaaaa
acaagcattcgcgtgctccaagtgaaaacaagggagcccctgacctttgc
cttacatacagttagagggtgtgccaccctcctggccagccaggctatgt
tcacgttctgtagagaagagctggcagctgcccatcccgaaggaagagcc
tttctatgcctgaaggtaactaatgttcaatctggtttacacatctccaa
aacaagaacagtttaaaagaacattagagcacaggcattagtgattcccc
agttacactcaaaacacttagggtgaggggaatgttgttgtgtgacgaga
cagcccccataggttcatacatttgaatgtctcgttctaatgtggatact
tagaaggatctaaagtggccttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_111613688_111614873
seq2: B6Ng01-128L12.b_50_1214 (reverse)

seq1  CCCTCAGCCTGATTCCCCTCCCCAGAATTGGCATTCATCAAGTACATACG  50
      ||||||| ||||||||    |||||||||||||||| ||||||||||| |
seq2  CCCTCAG-CTGATTCC---TCCCAGAATTGGCATTCTTCAAGTACATA-G  45

seq1  ACTCTAGCAGCCTGATATTTACGTTTGTATACTTGTGATTTCCTCTTTCT  100
      |||||||||| |||||||||||| |||||||| |||||||  ||||||  
seq2  ACTCTAGCAG-CTGATATTTACG-TTGTATAC-TGTGATT--CTCTTTTC  90

seq1  AAATAATTTCAGAATTTACTTTAAAAAAATATGAATTGTTGACAGAGAAG  150
       ||| ||||||||| |||||||  ||||||||| ||||||||||||||||
seq2  TAATTATTTCAGAA-TTACTTT--AAAAATATG-ATTGTTGACAGAGAAG  136

seq1  GATTTGTTTTTAAGAAGACTTTAAAATAGCTGCATTTTATGAACAATTCT  200
      ||||||||||  |||||||||| |||||||||||||||||| |||| |||
seq2  GATTTGTTTT--AGAAGACTTT-AAATAGCTGCATTTTATG-ACAA-TCT  181

seq1  TTAATCAGCCCTGAGTGACAGATACATTCTGTGTCAGAACACTATCTATC  250
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCAG-CCTGAGTGACAGATACATTCTGTGTCAGAACACTATCTATC  230

seq1  TTTAATGTTCTTCCTTGGAGTTTGGTTTGTAAATAAACATGAAGAGTGAT  300
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTTAATGTTCTTCCTTGGAGTTTGGTTTGT-AATAAACATGAAGAGTGAT  279

seq1  CATCTCGTGACATTCTTTTAAAATCTTTTTTTCTTCTTCTTCTTCTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCGTGACATTCTTTTAAAATCTTTTTTTCTTCTTCTTCTTCTTCTT  329

seq1  TCCCAGAAAGTAAATAAAACCCTCATTGTTTCCTAATCTTCATGAATAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAAAGTAAATAAAACCCTCATTGTTTCCTAATCTTCATGAATAAA  379

seq1  TTCTTTCTGGCCTCAGGTAATAGGCTGTTTCAAGGCTGCCCTATGCGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTGGCCTCAGGTAATAGGCTGTTTCAAGGCTGCCCTATGCGTCT  429

seq1  ACAGGAATGCCATTTAGACCTTCGAGCCGATGTTTCTGTGGAAGTGCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAATGCCATTTAGACCTTCGAGCCGATGTTTCTGTGGAAGTGCTTA  479

seq1  TAAGTCACGGAAGTGCGGATAGCCAGCACTGAATTTTTGGATGACTTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCACGGAAGTGCGGATAGCCAGCACTGAATTTTTGGATGACTTCAG  529

seq1  TTGCAGACCTCAGAATGCAGCTGGCCTCTGTGTAGGGTGGTGGTGGGGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGACCTCAGAATGCAGCTGGCCTCTGTGTAGGGTGGTGGTGGGGGG  579

seq1  AACCTTGTAAGAAGCATAAGCCTACTGACTGTATCTTGGCCCATGTTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTGTAAGAAGCATAAGCCTACTGACTGTATCTTGGCCCATGTTCCC  629

seq1  TTTTTTCCAGTAAGCTGTCTGCTCTACAGAGGTGTATAACCCTAATGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCCAGTAAGCTGTCTGCTCTACAGAGGTGTATAACCCTAATGGCT  679

seq1  TGTTGTATGCCATTAAAAGGTATTGTACACTCATAAAAGAATGACATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTATGCCATTAAAAGGTATTGTACACTCATAAAAGAATGACATTTT  729

seq1  GATCAATGCTGTTAAAAGAATTACTGTCTTGACACAGAAAAGCTTTCCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAATGCTGTTAAAAGAATTACTGTCTTGACACAGAAAAGCTTTCCTG  779

seq1  CTGCAAGTTTAAAAATATGCCTTTAAAAGCTTTTTATTGAATACCTTTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAGTTTAAAAATATGCCTTTAAAAGCTTTTTATTGAATACCTTTGC  829

seq1  ATCCCTCAGAAATATGCCGTTTTGGCATGAGGTTACTCTGAAGTATTCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTCAGAAATATGCCGTTTTGGCATGAGGTTACTCTGAAGTATTCCA  879

seq1  CATTATAACTTAAGCACAAACCTCCTATTTACCTTGAGAAGTCACAGGGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATAACTTAAGCACAAACCTCCTATTTACCTTGAGAAGTCACAGGGC  929

seq1  CAAACAGGCTATTTCCCTACCAAATGGGGCATGGTAGCCTGCAGTAGCGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGGCTATTTCCCTACCAAATGGGGCATGGTAGCCTGCAGTAGCGT  979

seq1  GGTACCATTTTAAGCCGTTGCTGTATGTGTTCTAAACAGAAAAGATTTGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCATTTTAAGCCGTTGCTGTATGTGTTCTAAACAGAAAAGATTTGT  1029

seq1  AAAAAGAAATATGAAAACTAAGCTAGTCCTTTTTTATTTTGCAAAGTAAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAATATGAAAACTAAGCTAGTCCTTTTTTATTTTGCAAAGTAAT  1079

seq1  GATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  1129

seq1  TGCTCATGCGCATGTTGTTTTTAAAAGATAGAATTC  1186
      ||||||||||||||||||||||||||||||||||||
seq2  TGCTCATGCGCATGTTGTTTTTAAAAGATAGAATTC  1165

seq1: chr8_111530437_111531424
seq2: B6Ng01-128L12.g_83_1056

seq1  CTTAGCCACAGTGGAGTAGAGAGAAATGTTTTTAGACAAGAAAAGAGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCCACAGTGGAGTAGAGAGAAATGTTTTTAGACAAGAAAAGAGCTT  50

seq1  CATGTTTGACATGTGTAACACAGTAAGTGCATGTGGAATCTGAGGGACGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTGACATGTGTAACACAGTAAGTGCATGTGGAATCTGAGGGACGC  100

seq1  TGAGGTGCCAGGGTGGACGTTAGGTTCAAGCTGTCACTAGTTCAAGTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTGCCAGGGTGGACGTTAGGTTCAAGCTGTCACTAGTTCAAGTGGT  150

seq1  GGTGCTGTCTTTCCACTGCAATGGTGCTACTAAGAGATACCTTTGAAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGTCTTTCCACTGCAATGGTGCTACTAAGAGATACCTTTGAAGAT  200

seq1  ATTTTAATTCCTAAACTACTTCATGCTAATATATCCCAAAAGGAAGTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATTCCTAAACTACTTCATGCTAATATATCCCAAAAGGAAGTGTT  250

seq1  TGAGCGTAATGATTTGTCACTTGTTTTGAGTAAAGGGAATTCCTCCTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCGTAATGATTTGTCACTTGTTTTGAGTAAAGGGAATTCCTCCTCTG  300

seq1  CGTTTCAAAAGAAAAGTCTGGGCTGCACTTGTTTCTCCGCACCGCTGCGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTCAAAAGAAAAGTCTGGGCTGCACTTGTTTCTCCGCACCGCTGCGC  350

seq1  AGAGAAGTAGTTTAGAAGTCTATGCTTCGTAGATGTCTGTGCCAAACCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGTAGTTTAGAAGTCTATGCTTCGTAGATGTCTGTGCCAAACCAC  400

seq1  CATCTAATACTGATGAGTTTATAGGGAGCACCTGCTATTACGAGACCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAATACTGATGAGTTTATAGGGAGCACCTGCTATTACGAGACCAGG  450

seq1  AACTAGAACCTGGCATCGGAGGATCGTGGTAGAAGCAAGGTGCACGCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGAACCTGGCATCGGAGGATCGTGGTAGAAGCAAGGTGCACGCCAG  500

seq1  CAGGTCATATTTACAGTTACAATATTTGGGGCTACCGCAGCCAGAAAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCATATTTACAGTTACAATATTTGGGGCTACCGCAGCCAGAAAATC  550

seq1  ACGGGGCAAGAAAGGAAGGGCAGTGCTGCCTTTTTCCTTTGTCTGGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGGCAAGAAAGGAAGGGCAGTGCTGCCTTTTTCCTTTGTCTGGAAAA  600

seq1  ACAAGCATTCGCGTGCTCCAAGTGAAAACAAGGGAGCCCCTGACCTTTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCATTCGCGTGCTCCAAGTGAAAACAAGGGAGCCCCTGACCTTTGC  650

seq1  CTTACATACAGTTAGAGGGTGTGCCACCCTCCTGGCCAGCCAGGCTATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATACAGTTAGAGGGTGTGCCACCCTCCTGGCCAGCCAGGCTATGT  700

seq1  TCACGTTCTGTAGAGAAGAGCTGGCAGCTGCCCATCCCGAAGGAAGAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGTTCTGTAGAGAAGAGCTGGCAGCTGCCCATCCCGAAGGAAGAGCC  750

seq1  TTTCTATGCCTGAAGGTAACTAATGTTCAATCTGGTTTACACATCTCCAA  800
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTTCTATGCCTGAAGGTAACTAATGTTCAATCTGGTTTACACATCTCC-A  799

seq1  AAACAAGAACAGGTCTAAAAGAACATTAGAGCACAGGCATTAGTGATTCC  850
      ||||||||||| || |||||||||||||||||||||||||||||||||||
seq2  AAACAAGAACA-GTTTAAAAGAACATTAGAGCACAGGCATTAGTGATTCC  848

seq1  CCAGTTAACACTCAAAACACTTAGGGGTGAGGGGAATGTGGTGTTGTGAA  900
      |||||| |||||||||||||||| ||||||||||||||| ||  |||| |
seq2  CCAGTT-ACACTCAAAACACTTA-GGGTGAGGGGAATGTTGTTGTGTG-A  895

seq1  CGAGAACAGCCCCCATAGGTTCATACATTTGAATGTCTCGTTCCTAATTG  950
      |||| ||||||||||||||||||||||||||||||||||||| |||||  
seq2  CGAG-ACAGCCCCCATAGGTTCATACATTTGAATGTCTCGTT-CTAAT--  941

seq1  GTGGAATACTTAGGAAGGATCAGAAAGTGTGGCCTTGT  988
      |||| ||||||| ||||||||  ||   ||||||||||
seq2  GTGG-ATACTTA-GAAGGATCTAAA---GTGGCCTTGT  974