BAC Information

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BAC

Clone NameB6Ng01-129A01
Chromosome8 (Build37)
Map Location 62,228,158 - 62,392,548
singlet/doubletdoublet
Overlap genenone
Upstream gene4930431L04Rik, BC030500, LOC665116, LOC436042
Downstream geneAadat, Mfap3l, LOC100040679, 2700029M09Rik, Clcn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129A01.bB6Ng01-129A01.g
ACCDH930702DH930703
length912879
definitionDH930702|Mus musculus domesticus DNA, BAC clone: B6Ng01-129A01, 5' end.DH930703|Mus musculus domesticus DNA, BAC clone: B6Ng01-129A01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,391,641 - 62,392,548)(62,228,158 - 62,229,031)
sequence
gaattcattatttggtggtgacacatccagctatgtgtcactttccatta
tgattattggcaggttcatttgagggcttgtcattactattcataagata
ccctgtagacatgatgatttccagtcaccataaaagttaatatttctatt
tttattttttattctaatgatttatttaactctcaattttaatagcataa
aaattccactgatgtttcatagctgacaattccaatggtaacatttggta
agaggatttacatgtgttaaaagaatcacaaattccactaactagacaga
atgtcatataaaaatttagtaattaaataagaatttatctataaaggtga
ttgaattattaattttacagttcattattagagaaggcataacatgtaat
ttgtctgtgtcttagggatttgaaagtatgtgaaagagaaaaattcctca
gataatctgtaatctctatcatcatttgttttgtgtatcttcattttata
tattttcaagacatttcagaagtatttagtaaactatatatatgattttg
tgatgaaattctcaaaatggagtaaggatcccaacttagtaccagttttt
tgatttctgagatttcctttttgtttactgcctcacaaaatgatttttcc
atgacaggatagaacatagtgcaagttttagataatgatgttcaagtggt
aggaacagagctatctgctggttccgtgctgagcctttttgtcctcctag
gtttacttggtatgttttcattgccactgactacttctttccgttgttga
tgaatttgaggaattgtcttcccaaatcatatgttctatccatgattcca
atttagatataacaaggttttcaggagatagggggtgtccttggcagtga
agaaagccaaaa
gaattccaatgtaatattcagtaaagacccttcctctcctgtttgttttt
gctttttactttctgccatggttatattttgttttaaattgagcatggca
taaatattgttattgatatttcatttgtattttgtattattgctgtaaga
gattttattagagcttttattgatttctgtaaatgtggactctattcaca
gtactattaatccaaggcatagttatggacaaagcaaaggttaagctcta
tatttgagttttcatctctatttcaatctgcacactgcaatgagaatgat
ctttataaaatgccaaccaagctttgttttcattgacttaaatctcttta
atggctttccagtgctctaggaataaaaaccaaactattgatcttatctc
ctattcttttctgtttgctcctcactatttattcaatctcttgtttttca
tgcctaccgcagcctcccatttctaaagtttgccaaataagtcaaacctt
tctcccgctcaatcccttacacgtgtgttcttttggctaggaatattttt
tgtacaacagcagatggggaactctgattcacccaacaggttcctgtgtt
ttcaggcaaaaaaaggaactgagcctagaaacaaagtacagagtctatga
tgtctttcgtgctatgaccaaatttataagtatttctttttttaattata
gaaagcaaaaccttctaattttgcactattctcactctttatcatgtatt
aaactacttgaactttagtttgaatgcgtgactttaaatatggtttattt
tcctttggacagaaacatttttggggttaacaaattttgagatggaggtt
tcttatgccacttaccaggattaggatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_62391641_62392548
seq2: B6Ng01-129A01.b_49_960 (reverse)

seq1  TTTTGGCTTTCTTCACTGCCAAGGACA-CCCCTATCTCCTGAAAA-CTTG  48
      ||||||||||||||||||||||||||| ||||||||||||||||| ||||
seq2  TTTTGGCTTTCTTCACTGCCAAGGACACCCCCTATCTCCTGAAAACCTTG  50

seq1  TTATATCTAAATTGGAATCATGGATAGAACATATGATTTGGGAAGACAAT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATCTAAATTGGAATCATGGATAGAACATATGATTTGGGAAGACAAT  100

seq1  TCCTCAAATTCATCAACAACGGAAAGAAGTAGTCAGTGGCAATG-AAACA  147
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCCTCAAATTCATCAACAACGGAAAGAAGTAGTCAGTGGCAATGAAAACA  150

seq1  TACCAAGTAAACCTAGGAGGAC-AAAAGGCTCAGCACGGAACCAGCAGAT  196
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TACCAAGTAAACCTAGGAGGACAAAAAGGCTCAGCACGGAACCAGCAGAT  200

seq1  AGCTCTGTTCCTACCACTTGAACATCATTATCTAAAACTTGCACTATGTT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGTTCCTACCACTTGAACATCATTATCTAAAACTTGCACTATGTT  250

seq1  CTATCCTGTCATGGAAAAATCATTTTGTGAGGCAGTAAACAAAAAGGAAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTGTCATGGAAAAATCATTTTGTGAGGCAGTAAACAAAAAGGAAA  300

seq1  TCTCAGAAATCAAAAAACTGGTACTAAGTTGGGATCCTTACTCCATTTTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGAAATCAAAAAACTGGTACTAAGTTGGGATCCTTACTCCATTTTG  350

seq1  AGAATTTCATCACAAAATCATATATATAGTTTACTAAATACTTCTGAAAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTCATCACAAAATCATATATATAGTTTACTAAATACTTCTGAAAT  400

seq1  GTCTTGAAAATATATAAAATGAAGATACACAAAACAAATGATGATAGAGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGAAAATATATAAAATGAAGATACACAAAACAAATGATGATAGAGA  450

seq1  TTACAGATTATCTGAGGAATTTTTCTCTTTCACATACTTTCAAATCCCTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGATTATCTGAGGAATTTTTCTCTTTCACATACTTTCAAATCCCTA  500

seq1  AGACACAGACAAATTACATGTTATGCCTTCTCTAATAATGAACTGTAAAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACAGACAAATTACATGTTATGCCTTCTCTAATAATGAACTGTAAAA  550

seq1  TTAATAATTCAATCACCTTTATAGATAAATTCTTATTTAATTACTAAATT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAATTCAATCACCTTTATAGATAAATTCTTATTTAATTACTAAATT  600

seq1  TTTATATGACATTCTGTCTAGTTAGTGGAATTTGTGATTCTTTTAACACA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATGACATTCTGTCTAGTTAGTGGAATTTGTGATTCTTTTAACACA  650

seq1  TGTAAATCCTCTTACCAAATGTTACCATTGGAATTGTCAGCTATGAAACA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATCCTCTTACCAAATGTTACCATTGGAATTGTCAGCTATGAAACA  700

seq1  TCAGTGGAATTTTTATGCTATTAAAATTGAGAGTTAAATAAATCATTAGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGAATTTTTATGCTATTAAAATTGAGAGTTAAATAAATCATTAGA  750

seq1  ATAAAAAATAAAAATAGAAATATTAACTTTTATGGTGACTGGAAATCATC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAATAAAAATAGAAATATTAACTTTTATGGTGACTGGAAATCATC  800

seq1  ATGTCTACAGGGTATCTTATGAATAGTAATGACAAGCCCTCAAATGAACC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTACAGGGTATCTTATGAATAGTAATGACAAGCCCTCAAATGAACC  850

seq1  TGCCAATAATCATAATGGAAAGTGACACATAGCTGGATGTGTCACCACCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAATAATCATAATGGAAAGTGACACATAGCTGGATGTGTCACCACCA  900

seq1  AATAATGAATTC  908
      ||||||||||||
seq2  AATAATGAATTC  912

seq1: chr8_62228158_62229031
seq2: B6Ng01-129A01.g_71_949

seq1  GAATTCCAATGTAATATTCAGTAAAGACCCTTCCTCTCCTGTTTGTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATGTAATATTCAGTAAAGACCCTTCCTCTCCTGTTTGTTTTT  50

seq1  GCTTTTTACTTTCTGCCATGGTTATATTTTGTTTTAAATTGAGCATGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTACTTTCTGCCATGGTTATATTTTGTTTTAAATTGAGCATGGCA  100

seq1  TAAATATTGTTATTGATATTTCATTTGTATTTTGTATTATTGCTGTAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTGTTATTGATATTTCATTTGTATTTTGTATTATTGCTGTAAGA  150

seq1  GATTTTATTAGAGCTTTTATTGATTTCTGTAAATGTGGACTCTATTCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTATTAGAGCTTTTATTGATTTCTGTAAATGTGGACTCTATTCACA  200

seq1  GTACTATTAATCCAAGGCATAGTTATGGACAAAGCAAAGGTTAAGCTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTATTAATCCAAGGCATAGTTATGGACAAAGCAAAGGTTAAGCTCTA  250

seq1  TATTTGAGTTTTCATCTCTATTTCAATCTGCACACTGCAATGAGAATGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGAGTTTTCATCTCTATTTCAATCTGCACACTGCAATGAGAATGAT  300

seq1  CTTTATAAAATGCCAACCAAGCTTTGTTTTCATTGACTTAAATCTCTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATAAAATGCCAACCAAGCTTTGTTTTCATTGACTTAAATCTCTTTA  350

seq1  ATGGCTTTCCAGTGCTCTAGGAATAAAAACCAAACTATTGATCTTATCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTTTCCAGTGCTCTAGGAATAAAAACCAAACTATTGATCTTATCTC  400

seq1  CTATTCTTTTCTGTTTGCTCCTCACTATTTATTCAATCTCTTGTTTTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCTTTTCTGTTTGCTCCTCACTATTTATTCAATCTCTTGTTTTTCA  450

seq1  TGCCTACCGCAGCCTCCCATTTCTAAAGTTTGCCAAATAAGTCAAACCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACCGCAGCCTCCCATTTCTAAAGTTTGCCAAATAAGTCAAACCTT  500

seq1  TCTCCCGCTCAATCCCTTACACGTGTGTTCTTTTGGCTAGGAATATTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCGCTCAATCCCTTACACGTGTGTTCTTTTGGCTAGGAATATTTTT  550

seq1  TGTACAACAGCAGATGGGGAACTCTGATTCACCCAACAGGTTCCTGTG-T  599
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGTACAACAGCAGATGGGGAACTCTGATTCACCCAACAGGTTCCTGTGTT  600

seq1  TTCAGGCAAAAAAAGGAACTGAGCCTAGAAAC-AAGTACAGAGTCTATGA  648
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTCAGGCAAAAAAAGGAACTGAGCCTAGAAACAAAGTACAGAGTCTATGA  650

seq1  TGTCTTTCGTGCTATGACCAAATTTATAAGTATTTCTTTTTTTAATTATA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTCGTGCTATGACCAAATTTATAAGTATTTCTTTTTTTAATTATA  700

seq1  GAAAGCAAAACCTTCTAATTTTGCACTATTCTCACTCTTTATCATGTATT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCAAAACCTTCTAATTTTGCACTATTCTCACTCTTTATCATGTATT  750

seq1  AAACTACTTGAACTTTAGTTTGAATGCGTGACTTTAAATATGGTTTATTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTACTTGAACTTTAGTTTGAATGCGTGACTTTAAATATGGTTTATTT  800

seq1  TCCTTTGGACAGAAACATTTTT-GGGTTAAC-AATTTTGAGATGGAGGTT  846
      |||||||||||||||||||||| |||||||| ||||||||||||||||||
seq2  TCCTTTGGACAGAAACATTTTTGGGGTTAACAAATTTTGAGATGGAGGTT  850

seq1  TCTTATGCCACTTA-CAAGATTAGGATAT  874
      |||||||||||||| || |||||||||||
seq2  TCTTATGCCACTTACCAGGATTAGGATAT  879