BAC Information

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BAC

Clone NameB6Ng01-129J20
Chromosome8 (Build37)
Map Location 102,567,530 - 102,568,662
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh8, A330008L17Rik, LOC667531, LOC100042069
Downstream geneLOC436054, LOC100042078, LOC100042086, LOC100042092, LOC384895
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129J20.bB6Ng01-129J20.g
ACCDH931152DH931153
length1,1241,114
definitionDH931152|Mus musculus domesticus DNA, BAC clone: B6Ng01-129J20, 5' end.DH931153|Mus musculus domesticus DNA, BAC clone: B6Ng01-129J20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaaaagattctgcatatgaagttgaacaaaagaaacaagcagat
atcaaatggccacatgtaaaaatgtctctggcactctgtttgcaattaaa
atactgctaaatatacccagcacacgtctgcatgcaattaaaaaaggaaa
agtaattggtagaatttatttcctataaataggtattcatttagtgtttt
aattcctaagagcttacaattatagttcatctctaaaggaagtcccagtt
tatataggttgtcacagttcataacatatgccctttaattaaatgtatta
gtactttataaaaaaaaagaattcaaatatgaaagtaatccattttatga
tccatttcttttaattgtgcattttagctttcttttaaaatgcaggtata
actatacacatatattttggtatcagtatggaattttcattttgaccaag
agctaagctttattatgtttattaaaatagtcctttgtttgtaaggccag
agcaaaatgaacaaaatactgagtggtggcgatgggcatataaaagaaaa
tatctggcacaatctatcagttaaacaatttattattttataatgaaaag
acgctatcactaataggtcaaacaagtctttcagactcacagtgttctct
cttttgtcatggtaaatacagtgttgttatcacagacaggatgacagctt
caggcaagagatacaactccagggactagaactttaatttaaaaagccat
gaggaaaaggcacaggaggaaatcagagaggacaggtctagagacaaaac
gatgcatttcataatctaaaaccctgccagactgcaagccaacctcagaa
gctggacttttaccatcaaaattagaggaagtgggatcacaaagaaacag
aagattctttggtgagaagggagaaatgagcattcaacacattaaaatgt
taccccaaacagactgagatgcagaaagatattaggggacaaggagagaa
agaagccctgctctgatgtctctcacagataaactaagaattcagcacat
caaaattcctgtagaccactatgaggaacaatatttcttttataggattg
aatgagtctactaccatgaaatga
gaattctcacctgaggaataccaaatggctgagaaacacctgaaaaaatg
ttcagcatccttaatcatcagggaaatacaaatctaaaaaaaaccctgat
tttctacctcacaccattcagaatggctaagataaaaaattaggtgacag
tagatgctggcgaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaagcttgtacaaccactctggaaatctgtctagcggttcttc
agaaaattggacatagtactaccggaggatcccccaatacctctcctgag
catatatccagaagatgtttcaagtgataagaaggacacatgctccacta
tgttcgtagctcccttatttataatagccaaaagctggaaagagcccaga
tgcccttcaacagaggaatggatacagaaaatgtggtacatttacacaat
ggagtactactcacctattaaaaagaatgaatttatgaaattcctagcca
aatggatggacctggagggcttcattctgaatgaggtaacccaatcacaa
atgaactcacatgatatgtactcactgataaatggatattagcccagaaa
cttagaatacccaagatataagatacaatttgcaaaactcatgaaactca
agaagaacgaagaccaaagtgtggacactttgcccccttcttagaactgg
gaacaaaacacccatgggaggagttcccaagacaaagtttgaagctgaca
tgaaaggatgaaccatttagagactatcatatccagggatccatcccata
atcatcctccaaaagctgacaccattgcatacactagcaagagtttgctg
aaaggaccctgatatagctgtctcttgtgaggcctagcaaacacagaagt
ggattctcacagtcagctatgggatggatcacagggccccaatggaggag
ctagagaaagtacacatgagctatattctagtctatctggtacagctacc
aaaataaattgtaactccatcctgcacaatctttgttttacagtcatctg
tctgcaaaatataactagagtagtggtggcaaaagtcttgtggaagggaa
ggggaaaggggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_102567530_102568662
seq2: B6Ng01-129J20.b_49_1172

seq1  GAATTCCAAAAGATTCTGCATATGAAGTTGAACAAAAGAAACAAGCAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAAGATTCTGCATATGAAGTTGAACAAAAGAAACAAGCAGAT  50

seq1  ATCAAATGGCCACATGTAAAAATGTCTCTGGCACTCTGTTTGCAATTAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATGGCCACATGTAAAAATGTCTCTGGCACTCTGTTTGCAATTAAA  100

seq1  ATACTGCTAAATATACCCAGCACACGTCTGCATGCAATTAAAAAAGGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGCTAAATATACCCAGCACACGTCTGCATGCAATTAAAAAAGGAAA  150

seq1  AGTAATTGGTAGAATTTATTTCCTATAAATAGGTATTCATTTAGTGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTGGTAGAATTTATTTCCTATAAATAGGTATTCATTTAGTGTTTT  200

seq1  AATTCCTAAGAGCTTACAATTATAGTTCATCTCTAAAGGAAGTCCCAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTAAGAGCTTACAATTATAGTTCATCTCTAAAGGAAGTCCCAGTT  250

seq1  TATATAGGTTGTCACAGTTCATAACATATGCCCTTTAATTAAATGTATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGGTTGTCACAGTTCATAACATATGCCCTTTAATTAAATGTATTA  300

seq1  GTACTTTATAAAAAAAAAGAATTCAAATATGAAAGTAATCCATTTTATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTATAAAAAAAAAGAATTCAAATATGAAAGTAATCCATTTTATGA  350

seq1  TCCATTTCTTTTAATTGTGCATTTTAGCTTTCTTTTAAAATGCAGGTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTCTTTTAATTGTGCATTTTAGCTTTCTTTTAAAATGCAGGTATA  400

seq1  ACTATACACATATATTTTGGTATCAGTATGGAATTTTCATTTTGACCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATACACATATATTTTGGTATCAGTATGGAATTTTCATTTTGACCAAG  450

seq1  AGCTAAGCTTTATTATGTTTATTAAAATAGTCCTTTGTTTGTAAGGCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGCTTTATTATGTTTATTAAAATAGTCCTTTGTTTGTAAGGCCAG  500

seq1  AGCAAAATGAACAAAATACTGAGTGGTGGCGATGGGCATATAAAAGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAATGAACAAAATACTGAGTGGTGGCGATGGGCATATAAAAGAAAA  550

seq1  TATCTGGCACAATCTATCAGTTAAACAATTTATTATTTTATAATGAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGCACAATCTATCAGTTAAACAATTTATTATTTTATAATGAAAAG  600

seq1  ACGCTATCACTAATAGGTCAAACAAGTCTTTCAGACTCACAGTGTTCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTATCACTAATAGGTCAAACAAGTCTTTCAGACTCACAGTGTTCTCT  650

seq1  CTTTTGTCATGGTAAATACAGTGTTGTTATCACAGACAGGATGACAGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTCATGGTAAATACAGTGTTGTTATCACAGACAGGATGACAGCTT  700

seq1  CAGGCAAGAGATACAACTCCAGGGACTAGAACTTTAATTTAAAAAGCCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAAGAGATACAACTCCAGGGACTAGAACTTTAATTTAAAAAGCCAT  750

seq1  GAGGAAAAGGCACAGGAGGAAATCAGAGAGGACAGGTCTAGAGACAAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAAGGCACAGGAGGAAATCAGAGAGGACAGGTCTAGAGACAAAAC  800

seq1  GATGCATTTCATAATCTAAAACCCTGCCAGACTGCAAGCCAACCTCAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCATTTCATAATCTAAAACCCTGCCAGACTGCAAGCCAACCTCAGAA  850

seq1  GCTGGACTTTTACCATCAAAATTAGAGGAAGTGGGATCACAAAGAAACAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGACTTTTACCATCAAAATTAGAGGAAGTGGGATCACAAAGAAACAG  900

seq1  AAGATTCTTTGGTGAGAAGGGAGAAATGAGCATTCAACAACATTAAAATG  950
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAGATTCTTTGGTGAGAAGGGAGAAATGAGCATTCAAC-ACATTAAAATG  949

seq1  TTACCCCAAACAAGACTGAGGAAGGCAGGAAAGATATTAAGGGGACAAAG  1000
      ||||||||||| ||||||||  | ||| |||||||||| |||||||||  
seq2  TTACCCCAAAC-AGACTGAG--ATGCA-GAAAGATATT-AGGGGACAA--  992

seq1  GAAGAGAAAGAAGCCCCTGCCTCTGATGTCTCTCACCAGATTAAACTAAA  1050
      | ||||||||||| ||||| ||||||||||||||| |||| |||||| ||
seq2  GGAGAGAAAGAAG-CCCTG-CTCTGATGTCTCTCA-CAGA-TAAACT-AA  1037

seq1  GAATTCCAGCACAATTCAAAAAATTCCCTGTAAAGACCACCTATGAGGGA  1100
      ||||| |||||||  ||||||   | |||||  |||||| |||||| |||
seq2  GAATT-CAGCACA--TCAAAA---TTCCTGT--AGACCA-CTATGA-GGA  1077

seq1  ACAATATTTCTTTTATAAGGGGATT-----------------TGAAATGA  1133
      |||||||||||||||||   |||||                 ||||||||
seq2  ACAATATTTCTTTTATA---GGATTGAATGAGTCTACTACCATGAAATGA  1124